Streptomyces collinus: B446_21020
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Entry
B446_21020 CDS
T02787
Name
(GenBank) AdsA-like sigma factor
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
sci
Streptomyces collinus
Brite
KEGG Orthology (KO) [BR:
sci00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sci03021
]
B446_21020
Transcription machinery [BR:
sci03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
B446_21020
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
Sigma70_ECF
Motif
Other DBs
NCBI-ProteinID:
AGS71016
UniProt:
S5UZ29
LinkDB
All DBs
Position
complement(4859456..4860235)
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AA seq
259 aa
AA seq
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MYPHVGVDASGLATLRTAVATVKETLRGFVPTAYAVPAFATAAPLGPCYALAESGAAVGR
RGRSTGAATARRPAADSDSARMMDLVERAQAGEAEAFGRLYDQYSDTVYRYIYYRVGGKA
TAEDLTSETFLRALRRIGTFTWQGRDFGAWLVTIARNLVADHFKSSRFRLEVTTGEMLDA
NEVERSPEDSVLESLSNAALLDAVRRLNPQQQECVTLRFLQGLSVAETARVMGKNEGAIK
TLQYRAVRTLARLLPDDAR
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
gtgtacccacacgtcggggttgacgcctcgggcctggctacgctgcgcacagcagtcgca
acggtcaaggagacgctgcgcggcttcgtccccaccgcgtacgccgtccccgccttcgcc
accgccgcgcccctcggcccgtgctacgcactggccgagagcggcgccgcggtcggcaga
cgagggcgctccaccggcgcggccaccgcccgccgaccggccgcggacagcgacagcgcc
cggatgatggacctcgtggagcgcgcccaggcgggggaggccgaggccttcggccggctg
tacgaccagtacagcgacaccgtctaccgctacatctactaccgggtgggcggcaaggcg
accgccgaggacctgacgagcgagacctttctgcgggcgctgcgcaggatcggcaccttc
acctggcagggccgtgacttcggcgcctggctggtgacgatcgcccgcaacctcgtcgcc
gaccacttcaagtcgagccggttccgtctcgaggtcaccaccggtgagatgctcgacgcc
aacgaggtcgagcgctcccctgaggactcggtcctggagtccctctccaacgccgcgctg
ctggacgccgtccgccggctcaacccccagcagcaggagtgcgtgaccctgcgcttcctc
caggggctctcggtcgccgagaccgcccgggtgatgggcaagaacgagggcgccatcaag
accctccagtaccgggccgtgcgcacgctcgcccggctgctgccggatgacgcccgctga
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