Streptomyces collinus: B446_24415
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Entry
B446_24415 CDS
T02787
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
sci
Streptomyces collinus
Pathway
sci03420
Nucleotide excision repair
sci03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sci00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
B446_24415
03430 Mismatch repair
B446_24415
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sci03400
]
B446_24415
Enzymes [BR:
sci01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
B446_24415
DNA repair and recombination proteins [BR:
sci03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
B446_24415
MMR (mismatch excision repair)
Other MMR factors
B446_24415
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AGS71694
UniProt:
S5V994
LinkDB
All DBs
Position
5607173..5610742
Genome browser
AA seq
1189 aa
AA seq
DB search
MPARISDPEQLKELLGIPFTPEQTACIIAPPAPQVIVAGAGSGKTTVMAARVVWLVGTGQ
VAPEQVLGLTFTNKAAGELAERVRKALIKAGVTDPDVIDPDDPPGEPVISTYHAFAGRLL
TDHGLRIGLEPSSRLLADATRYQLAARVLREAPGPYPALTRSFADLVSDLLALDSELAEH
LVDPARLRAWDADLLQELESTKLTNADLRKVPDTAAARRELTDLVERYRTAKRQRDLLDF
GDQIALSARLAGVPEVGRQLREEFRVVLLDEYQDTSVAQRVLLSGLFGGGTGHPVTAVGD
PCQAIYGWRGASVANLDDFPDHFARTDGRPATRQSLSENRRSGGRLLDLANGLAEPLRAM
HAGVEALRPAPGAERDGTVRCALLPTHAEEIDWIADSLAHLVRTGTAPAEIAVLCRTAGD
FAEIQGALVARDVPVEVVGLSGLLHLPEIADLVAVCEVLQDPAANASLVRLLTGPRWRIG
PRDLALLGRRARLLVAHARVDDTEDPDRRLAEAVEGVDPSEVISLADALDTFLESPLNDD
EGDADGLPFSPDARVRFARLAAELRDLRRSLADPLMDVLHRVLAVTGLEVELSASPHALA
ARRRETLSNFLDIAASFAAGDGEATLLAFLGFLRTAAQYEKGLDNALPGGENTVKVLTAH
KSKGLEWDVVAVPGLVTGTFPSAQGREKWTAQAKVLPHALRGDTATLPDIDSWDSRGMKA
FHEAMKEHQHTEELRLGYVTFTRPRSLLLGSGHWWGPSQKKPRGPSDFLQALYDHCAAGY
GEIEAWADEPAEDEENPALHTATADQVWPLPLDDAALARRRAAAETVLTHLDALAAHQDA
PAPATHDPAAFDDPDWPAPTDEDQPYGEEFPYDDEPYSDDPYDDPFADGGPFGDDHDSAP
VGDSSGDPRGSDLYEGGVPTVPHQAPSPAGHPGGGHAPRPAPRLPSPLTPEEARAIASWD
RDLDALTGELLRARRSTTDVPLPASLTASQLMRLAEDPDGLAQELARPMPRPPQPAARRG
TRFHAWVETRFEELTLPMLEPDELPGTDAEIADERDLEALKEAFERTEYARRTPYRIETP
FQLTLAGRVVRGRIDAVYRNGDGPTATYEIVDWKTSRTRAADPLQLAVYRLAWAEQQGVP
LHAVTAAFLYVRGGEVVRPTGLPDRPALERLLTGDAPDDTDTAHQASQV
NT seq
3570 nt
NT seq
+upstream
nt +downstream
nt
atgcccgcccgtatcagcgaccccgagcagctcaaagagctcctcggcatccccttcacc
ccggagcagacggcctgcatcatcgcgccgcccgccccgcaggtcatcgtggccggagcc
gggtcgggcaagaccaccgtcatggccgcccgggtcgtctggctggtcggcaccggccag
gtcgcccccgaacaggtcctcggcctgaccttcacgaacaaggcggccggtgagctcgcc
gaacgcgtccgcaaggccctgatcaaggccggcgtcaccgaccccgacgtcatcgacccg
gacgacccgcccggcgagccggtcatctcgacctaccacgccttcgccggccgcctgctg
accgaccacggcctgcgcatcggcctcgaacccagctcccggctcctcgccgacgccacc
cgctatcagctcgccgcacgcgtcctgcgcgaggcccccggcccctacccggccctgacc
cgctccttcgccgacctggtcagcgacctgctcgccctcgactccgaactcgccgaacac
ctcgtggaccccgcgcggctgcgcgcctgggacgcggacctgctgcaggagctggagagc
accaagctcaccaacgccgacctgcgcaaggtccccgacaccgccgccgcccgccgcgaa
ctcaccgacctcgtcgagcgctaccggaccgccaaacgccagcgcgacctcctcgacttc
ggcgaccagatcgccctgtccgcccgcctcgccggcgtccccgaagtgggccggcagctg
cgcgaggagttccgcgtggtgctcctggacgagtaccaggacacctccgtcgcccagcgc
gtcctgctctccggcctcttcggcggcggcaccggccaccccgtcaccgccgtcggcgac
ccctgccaggccatctacggatggcgcggcgcctccgtcgccaacctggacgacttcccc
gaccacttcgcccgcaccgacggccggcccgccacccggcagtcgctcagcgagaaccgc
cgcagcggcggccgcctcctcgacctcgccaacggcctcgccgagccgctgcgcgccatg
cacgcgggcgtggaagccctgcgccccgcccccggggccgaacgcgacggcacggtccgc
tgcgccctgctgcccacccacgccgaggagatcgactggatcgccgactccctcgcccat
ctcgtgcgcaccggcaccgcccccgccgagatcgccgtcctgtgccgcacggccggcgac
ttcgccgagatccagggcgcactcgtcgcccgcgacgtccccgtggaggtcgtcggcctc
tccgggctgctgcacctgcccgagatcgccgacctcgtcgccgtctgcgaagtcctccag
gaccccgcggccaacgcctccctggtccgcctgctgaccggcccgcgctggcgcatcggc
ccccgcgacctcgccctcctgggccgccgcgcccgcctgctggtcgcccacgcacgcgtg
gacgacaccgaggaccccgaccgccggctcgccgaggccgtcgagggagtcgacccgtcc
gaggtgatatcgctcgcggacgccctcgacaccttcctcgaatcgcccctgaacgacgac
gagggcgacgccgacggactgccgttctccccggacgcgcgcgtacgcttcgcccgcctc
gccgccgaactgcgcgacctgcggcgctccctggccgacccgctgatggacgtcctgcac
cgcgtcctcgccgtcaccggcctcgaggtcgagctgtcggcgtccccgcacgcgctcgcc
gcccgccgccgcgagaccctgtccaacttcctcgacatcgccgcatccttcgccgccggc
gacggcgaggccaccctgctcgccttcctcgggttcctgcgcaccgccgcccagtacgag
aagggcctcgacaacgccctgcccggcggcgagaacaccgtcaaggtgctcaccgcgcac
aagtccaagggcctggagtgggacgtcgtcgccgtccccggcctggtgaccggcaccttc
cccagcgcccagggccgggagaagtggaccgcgcaggccaaggtgctgccgcacgccctg
cgcggcgacaccgccaccctgcccgacatcgactcctgggactcccgcggcatgaaggcc
ttccacgaggccatgaaggagcaccagcacaccgaggagctgcgcctcggctacgtcacc
ttcacccgcccccgctccctcctgctcggctccggccactggtggggacccagccagaag
aagccgcgcggcccctccgacttcctccaggccctgtacgaccactgcgccgccgggtac
ggcgagatcgaggcgtgggccgacgagcccgccgaggacgaggagaacccggccctgcac
acggccaccgccgaccaggtgtggccgctccccctggacgacgcggccctcgcccgccgc
cgcgcggcggccgagaccgtcctcacccacctcgacgccctcgccgcccaccaggacgcc
ccggcgcccgccacgcacgacccggccgccttcgacgacccggactggccggccccgacg
gacgaggaccagccctacggcgaggagttcccctacgacgacgagccgtactccgacgac
ccgtacgacgacccgttcgccgacggtggcccgttcggagacgaccacgacagcgccccg
gtcggtgactcgtccggcgacccccgcggaagcgacctgtacgaaggcggcgtcccgacc
gtcccgcaccaggcgccctccccggccgggcaccccggcggcggacacgccccccgcccg
gcgccccggctcccctcgcccctcacccccgaggaggcgcgcgccatcgcctcctgggac
cgcgacctcgacgccctcaccggcgaactgctgcgcgcccggcgcagcaccaccgacgta
cccctgccggcctcgctcaccgcgtcccagctgatgcgcctggccgaggacccggacggg
ctcgcgcaggaactcgcacgccccatgccgcgccccccgcagcccgccgcgcgtcggggc
acccgcttccacgcctgggtggagacacgcttcgaggaactgacgctccccatgctggag
cccgacgagctgcccggcaccgacgccgagatcgccgacgaacgtgacctcgaagccctc
aaggaagccttcgaacgcaccgagtacgcccgccgcaccccgtaccggatcgagacgccc
ttccagctcacgctcgccggccgggtcgtgcgggggcggatcgacgccgtctaccgcaac
ggcgacggaccgacggcgacctacgagatcgtcgactggaagaccagccgcacccgcgcc
gccgaccccctccagctcgccgtctaccgcctggcctgggccgagcagcagggcgtcccg
ctccacgcggtcaccgccgcgttcctctacgtgcgcggcggcgaggtcgtccgtcccacg
ggcctgcccgaccggcccgctctggagcggctgctcaccggtgacgcccccgacgacacc
gacacggcacaccaggcctcacaagtgtga
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