Streptomyces collinus: B446_24675
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Entry
B446_24675 CDS
T02787
Name
(GenBank) RNA polymerase sigma factor SigH
KO
K03090
RNA polymerase sigma-B factor
Organism
sci
Streptomyces collinus
Brite
KEGG Orthology (KO) [BR:
sci00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sci03021
]
B446_24675
Transcription machinery [BR:
sci03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
B446_24675
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_23
DUF7343
Sigma70_ECF
HTH_24
NirdL-like_HTH
MarR_2
MarR
IF2_N
HTH_5
HTH_3
HTH_Crp_2
GerE
HTH_AraC
HTH_28
Motif
Other DBs
NCBI-ProteinID:
AGS71746
UniProt:
S5V183
LinkDB
All DBs
Position
complement(5667741..5668568)
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AA seq
275 aa
AA seq
DB search
MSEHERYAEDGAPGAEAAPTPQHDPQDRSGARVMFVELRKLNAGSAEYAELRNRLVRMHL
PLVEHLARRFRNRGEPLDDLTQVATIGLIKSVDRFDPERGVEFSTYATPTVVGEIKRHFR
DKGWAVRVPRRLQELRLSLTTATAELSQLHGRSPTVHELAEKLAISEEEVLEGLESANAY
STLSLDVPDTDDESPAVADTLGAEDEALEGVEYRESLKPLLEDLPPREKRILLLRFFGNM
TQSQIAQEVGISQMHVSRLLARTLAQLREKLLVEE
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagcacgagcgatacgcggaggacggcgcgccgggcgcggaggccgcgccgacc
cctcagcacgacccccaggaccgcagcggggcgcgcgtgatgttcgtcgagctgcgcaag
ctgaacgcgggcagcgcggagtacgcggagctgcgcaaccggctggtccgtatgcacctg
ccgctcgtcgagcacctggcgcgccgcttccgcaaccgcggtgagccgctggacgacctg
acccaggtcgccaccatcgggctgatcaagtcggtggaccgcttcgatcccgagcgcggg
gtggagttctctacgtacgccacgccgacggtcgtcggcgagatcaagcggcacttccgc
gacaagggctgggcggtccgcgtgccgcgccggctccaggagctgcgcctgtcgctgacc
actgcgacggcggagctgtcccagctgcacggccgctcccccacggtgcacgagctggcc
gagaagctcgccatctccgaggaggaggtcctggagggcctggagtccgcgaacgcgtac
tcgacgctgtccctggacgtccccgacaccgacgacgagtccccggcggtcgccgacacc
ctcggcgccgaggacgaggcgctggagggcgtggagtaccgcgagtccctcaagccgctg
ctggaggacctgccgccgcgggagaagcgcatcctgctgctgcgcttcttcgggaacatg
acccagtcgcagatcgcgcaggaggtcggcatctcgcagatgcacgtgtcccggctgctc
gcccggaccctcgcccagctgcgggagaagctgctggtcgaggagtag
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