Streptomyces collinus: B446_25090
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Entry
B446_25090 CDS
T02787
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
sci
Streptomyces collinus
Pathway
sci00300
Lysine biosynthesis
sci00470
D-Amino acid metabolism
sci01100
Metabolic pathways
sci01110
Biosynthesis of secondary metabolites
sci01120
Microbial metabolism in diverse environments
sci01230
Biosynthesis of amino acids
Module
sci_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
sci00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
B446_25090
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
B446_25090
Enzymes [BR:
sci01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
B446_25090
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
NBD_C
Motif
Other DBs
NCBI-ProteinID:
AGS71829
UniProt:
S5V9N5
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All DBs
Position
5775881..5777272
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AA seq
463 aa
AA seq
DB search
MSRSAHPAGPRYADVLPEGHYSAPPADLNALDPKVWAQTVSRDDDGVLTVGGIPATRLAE
EFGTPAYILDETDFRARARAWRTAFGADADVFYAGKAFLSRAVVRWLKEEGLNLDVCSGG
ELATALSAGMPAERIAFHGNNKSVEEITRAVEAGVGRIVLDSFQEIVRVAHIAQSLGRRQ
KVQIRITVGVEAHTHEFIATAHEDQKFGIPLAGGQAAEAVRRALQLDGLELIGIHSHIGS
QIFDMSGFEVAAHRVVGLLRDIRDEHGVELPEIDLGGGLGIAYTSDDDPREPHEIAKALS
EIVTRECESARLRTPRISVEPGRAIVGPTAFTLYEVGTVKPLEGLRTYVSVDGGMSDNIR
TALYDAEYSVSLVSRSSDAEPMRARVVGKHCESGDIVVKDAFLPADLAPGDLIAVPATGA
YCRSMASNYNHVLRPPVVAVKDGEARVVVRRETEDDLLRLDVG
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgagccgttccgcccaccccgccgggccccgttacgccgacgtcctgcccgaggggcac
tactcggccccgcccgccgacctcaacgccctcgaccccaaggtgtgggcccagaccgtc
agccgggacgacgacggtgtgctgaccgtcggcgggattcccgcgacccggctcgcggag
gagttcggcacccccgcctacatcctcgacgagaccgacttccgggcccgggcgcgggcc
tggcggaccgcgttcggggccgacgccgacgtcttctacgccggcaaggcgttcctgtcc
cgggccgtcgtgcgctggctgaaggaggaggggctcaacctggacgtctgttccggcggg
gaactggccaccgcgctctccgccggcatgcccgccgagcgcatcgccttccacggcaac
aacaagtcggtcgaggagatcacccgggccgtcgaggcgggcgtcgggcggatcgtgctc
gactccttccaggagatcgtgcgggtcgcgcacatcgcgcagtccctcggcaggcgccag
aaggtgcagatccgcatcaccgtcggggtcgaggcccacacccacgagttcatcgccacc
gcgcacgaggaccagaagttcggcatcccgctcgcgggcggccaggccgccgaggccgtg
cggcgggcgctgcagctcgacgggctcgagctgatcgggatccacagccacatcgggtcg
cagatcttcgacatgtccggcttcgaggtcgccgcccaccgggtcgtcggactgctgcgc
gacatccgcgacgagcacggcgtcgagctgcccgagatcgacctcggcggcggcctcggc
atcgcctacaccagcgacgacgacccccgcgagccgcacgagatcgccaaggcgctctcc
gagatcgtcacgcgcgagtgcgagtccgcccggctgcggaccccgcgcatctccgtggag
ccggggcgcgccatcgtcgggccgacggcgttcacgctgtacgaggtcggcaccgtcaag
ccgctggaggggctgcggacgtacgtctccgtcgacggcgggatgtccgacaacatccgc
acggcgctgtacgacgccgagtacagcgtctccctcgtctcgcgctccagtgacgccgag
ccgatgcgggcccgggtggtcggcaagcactgcgagagcggggacatcgtggtcaaggac
gcgttcctgcccgccgacctggcaccgggtgacctcatcgccgtaccggccaccggcgcc
tactgccgctccatggccagcaactacaaccacgtgctgcggccgccggtggtcgccgtc
aaggacggcgaggcgcgggtcgtcgtccggcgcgagaccgaggacgacctgctgcgtctc
gacgtcggatga
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