Streptomyces collinus: B446_26830
Help
Entry
B446_26830 CDS
T02787
Name
(GenBank) polynucleotide phosphorylase/polyadenylase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
sci
Streptomyces collinus
Pathway
sci03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sci00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
B446_26830
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sci03019
]
B446_26830
03016 Transfer RNA biogenesis [BR:
sci03016
]
B446_26830
Enzymes [BR:
sci01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
B446_26830
Messenger RNA biogenesis [BR:
sci03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
B446_26830
Transfer RNA biogenesis [BR:
sci03016
]
Prokaryotic type
tRNA degradation factors
B446_26830
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
KH_1
RNase_PH_C
KH-I_KHDC4-BBP
KH_PNO1_2nd
KH_2
KH_KhpA-B
Motif
Other DBs
NCBI-ProteinID:
AGS72174
UniProt:
S5VAM6
LinkDB
All DBs
Position
6187460..6189682
Genome browser
AA seq
740 aa
AA seq
DB search
MENETHYAEAVIDNGAFGTRTIRFETGRLAKQAAGSAVAYLDDDTMVLSATTASKNPKDQ
LDFFPLTVDVEERMYAAGKIPGSFFRREGRPSEDAILTCRLIDRPLRPSFKKGLRNEIQV
VATIMALNPDHLYDVVAINAASASTQLAGLPFSGPIGGVRVALIRGQWVAFPTHTELEDA
VFDMVVAGRALEDGDVAIMMVEAEATDKTIKLVEGGSEAPTEEVVAAGLEAAKPFIKVLC
KAQADLASKAAKPTAEFPIFLDYQDDVLEALTAAVKPELAQALTIAGKQEREAELDRVKG
LAAEKLLPEFEGREKEISAAYRSLTKTLVRERVIKEKKRIDGRGVTDIRTLAAEVEAIPR
VHGSAVFERGETQILGVTTLNMLRMEQQLDTLSPVTRKRYMHNYNFPPYSTGETGRVGSP
KRREIGHGALAERALVPVLPTREEFPYAIRQVSEALSSNGSTSMGSVCASTMSLLNAGVP
LKAPVAGIAMGLISQEIEGETHYVTLTDILGAEDAFGDMDFKVAGTKEFVTALQLDTKLD
GIPASVLAAALKQARDARLHILDVMMEAIDTPDEMSPNAPRIITVKIPVDKIGEVIGPKG
KMINQIQEDTGAEITIEDDGTIYIGAADGPSAEAARTTINGIANPTMPEVGERYLGTVVK
TTTFGAFVSLLPGKDGLLHISQIRKLAGGKRVENVEDVLGVGQKVQVEIAEIDSRGKLSL
IPVIEGEEGSDETQKDDAEQ
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
gtggagaacgagacccactacgccgaggccgtcatcgacaacggcgccttcggcacccgc
accatccgcttcgagacgggccgcctggccaagcaggccgccggctccgccgtggcgtac
ctggacgacgacaccatggtgctgtcggccaccaccgcctccaagaaccccaaggaccag
ctcgacttcttccccctgacggtggacgtcgaggagcggatgtacgccgccggcaagatc
cccggcagcttcttccgccgtgagggccgtccctccgaggacgccatcctcacctgccgc
ctgatcgaccgcccgctgcgcccgtccttcaagaagggcctgcgcaacgagatccaggtc
gtcgccacgatcatggccctcaaccccgaccacctgtacgacgtcgtggcgatcaacgcc
gcgtccgcgtcgacgcagctggccggcctgcccttctccggcccgatcggcggcgtccgc
gtcgcgctgatccgcggccagtgggtcgccttcccgacgcacaccgagctcgaggacgcc
gtcttcgacatggtggtcgccggccgcgcccttgaggacggcgacgtcgcgatcatgatg
gtcgaggccgaggccaccgacaagaccatcaagctggtcgagggcggctccgaggcgccg
accgaggaggtcgtcgccgccggtctcgaggccgcgaagcctttcatcaaggtcctgtgc
aaggcccaggccgacctcgcgtcgaaggccgccaagccgaccgccgagttcccgatcttc
ctggactaccaggacgacgtcctcgaggccctgacggccgccgtcaagcccgagctcgcc
caggcgctcaccatcgccggcaagcaggagcgcgaggccgagctggaccgcgtcaagggt
ctggccgccgagaagctcctgccggagttcgagggccgcgagaaggagatctccgccgcg
taccgctcgctgaccaagaccctggtccgtgagcgcgtcatcaaggagaagaagcgcatc
gacggccgcggtgtcaccgacatccgcaccctggccgccgaggtcgaggccatcccgcgc
gtgcacggctccgcggtgttcgagcgtggcgagacccagatcctgggcgtcaccaccctc
aacatgctccgcatggagcagcagctggacaccctctccccggtgacccgcaagcgctac
atgcacaactacaacttcccgccgtactccaccggcgagaccggccgcgttggctccccg
aagcgccgcgagatcggccacggcgccctcgccgagcgcgccctcgtgccggtcctgccg
acgcgcgaggagttcccctacgcgatccgccaggtctccgaggcgctgagctccaacggc
tcgacgtccatgggctcggtgtgcgcctccaccatgtcgctgctgaacgccggtgtgccg
ctgaaggcccccgtcgccggtatcgccatgggcctgatctcccaggagatcgagggcgag
acgcactacgtcaccctcaccgacatcctcggtgcggaggacgccttcggcgacatggac
ttcaaggtcgccggcaccaaggagttcgtgaccgccctccagctcgacaccaagctggac
ggcatccccgcctccgtcctggccgccgccctcaagcaggcccgtgacgcccgcctccac
atcctcgacgtgatgatggaagcgatcgacacgccggacgagatgtccccgaacgccccg
cggatcatcaccgtcaagatccccgtggacaagatcggtgaggtcatcggccccaagggc
aagatgatcaaccagatccaggaggacacgggcgccgagatcaccatcgaggacgacggc
acgatctacatcggtgccgccgacggcccgtccgccgaggccgcccgcaccacgatcaac
ggcatcgccaacccgacgatgcccgaggtcggcgagcgctacctcggtacggtcgtgaag
acgaccaccttcggtgcgttcgtctcgctgctgcccggcaaggacggtctgctgcacatc
tcgcagatccgcaagctcgccggcggcaagcgcgtggagaacgtcgaggacgtcctcggc
gtgggccagaaggtccaggtcgagatcgccgagatcgactcccgcggcaagctctccctc
atccccgtgatcgagggcgaggaaggttccgacgagacgcagaaggacgacgccgagcag
tga
DBGET
integrated database retrieval system
