Streptomyces collinus: B446_31890
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Entry
B446_31890 CDS
T02787
Symbol
lysS
Name
(GenBank) lysyl-tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
sci
Streptomyces collinus
Pathway
sci00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sci00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
B446_31890 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sci01007
]
B446_31890 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sci03016
]
B446_31890 (lysS)
Enzymes [BR:
sci01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
B446_31890 (lysS)
Amino acid related enzymes [BR:
sci01007
]
Aminoacyl-tRNA synthetase
Class II (A)
B446_31890 (lysS)
Transfer RNA biogenesis [BR:
sci03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
B446_31890 (lysS)
Prokaryotic type
Other AARSs
B446_31890 (lysS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LPG_synthase_C
tRNA-synt_2
tRNA-synt_2_TM
tRNA_anti-codon
tRNA-synt_2d
DUF4191
Motif
Other DBs
NCBI-ProteinID:
AGS73182
UniProt:
S5VR93
LinkDB
All DBs
Position
7381387..7384665
Genome browser
AA seq
1092 aa
AA seq
DB search
MTATAGPDARGSAAGRTLPPAGGRLGWVPEAFGTLFAFLGLLCALLAFIAPLRTVLRPVV
RALDLLLVPISANLAYAVFLFLLAGATAARKKVAWWLVVVYLGLLVVFDVLGLALGQYAV
SLPSFVLCGLLLLLLVLARAEFYAASRRGAVWRALGVLVAGLVVAIVVGWGLVSLFPGTL
PEGQHLAWAADRVCGGLVSNSSFDGRPPRKVTFLLGLFGALALLNAAAALFRSQRLEAAL
HGDEEARIRALLGAYGAQDSLGYFATRRDKAVVFSSSGKAAVTYRVEAGVCLASGDPVGD
PEAWPHAIAAWLDVARRHAWAPAVMGASESGARAFARAGLGALQLGDEAIVHVSGFDLNG
RDMRVTRQAVHRVRRTGATSRIRRHATLTDREMEEIVDKADAWRDTETERGFSMALDRLG
DPSDGDCLLVEALSEDGRLLALLSFVPWGRGGVSLDLMRRDRSAPNGVMEFMVAELCAAA
PKLGVRRISLNFAVFRSVFEEGARIGAGPVLRLWRRLLLFFSRWWQLEALYRSNAKYRPE
WYPRFICYGETASLARIGLASAIAEGFVSVPSLRKLWGKGHPKTGQRPATTEGLPPLAAL
GLDGGDEAGTAVPDAGLSDQVRVRLRKLDRLRATGTDPYPVGGPTPTHALADVPHGGDVT
VAGRVMLVRDFGGIVFAVLRDWSGDRQLALIRDRSGAALDRFRDTADIGDHITATGRAGV
SDKGEPTVFVTSWHLAGKCLHPLPDKRRGLADPEARVRRRYLDLVTSPAARQVVRTRSTV
VQALRQGLLDRGYVEVETPMLQQIHGGANARPFTTHINAYDLDLYLRIAPELYLKRLCVG
GLERVFEMGRTFRNEGVSYKHNPEFTMLEAYQAHADYDVMRDLARELIQGAATAAFGSAV
ARKDGREYDISGDWPVKTVHGALSEALGEEIGPGTELLRLHRLCDRTGVPYTPDDTPGDV
VLEMYERLVEERTRLPTFYKDFPTEVSPLTRQHRADPRLAERWDLVAFGTELGTAYSELT
DPVEQRRRLTEQSLLAAGGDPEAMELDEDFLDALEYAMPPTGGLGIGVDRLVMFLTGLTI
RETLPFPLVRRR
NT seq
3279 nt
NT seq
+upstream
nt +downstream
nt
atgactgccaccgccgggccggacgcacgcgggtcggccgcgggccggacactcccgccc
gccggcggccgcctcggctgggtgcccgaggccttcgggaccctgttcgccttcctcggc
ctgctctgcgcgctgctcgcgttcatcgcccccctgcgcaccgtgctccgcccggtcgtg
cgcgccctcgacctgctcctggtgccgatcagcgccaacctggcgtacgcggtcttcctg
ttcctgctggccggcgccaccgccgcccgcaagaaggtcgcctggtggctggtcgtggtc
tacctgggcctgctggtcgtcttcgacgtcctcggcctggccctgggccagtacgccgtc
tcgctgccctccttcgtgctctgcggcctgctgctgctcctgctggtgctcgcccgcgcg
gagttctacgcggcctcccgccgcggtgccgtgtggcgcgccctgggggtgctggtggcc
gggctcgtcgtcgccatcgtcgtcggctgggggctggtctcgctgttcccgggcaccctg
ccggagggccagcacctggcgtgggcggcggaccgggtgtgcggcgggctggtctccaac
agctccttcgacggccggccgccgcgcaaggtcaccttcctgctcggcctgttcggcgcg
ctcgcgctgctgaacgcggccgccgcgctcttccgctcccagcgcctggaagcggccctg
cacggcgacgaggaggcacgtatccgcgccctcctcggggcctacggcgcacaggactcg
ctcggctacttcgccacccggcgggacaaggccgtcgtcttctcctccagcggcaaggcc
gccgtcacctaccgcgtcgaggccggcgtgtgcctggccagcggcgaccccgtgggcgac
cccgaggcgtggccgcacgcgatcgccgcgtggctggacgtggcccgccggcacgcctgg
gcgcccgcggtgatgggcgcctcggagtccggggcccgcgccttcgcccgcgccgggctc
ggcgccctccagctcggcgacgaggcgatcgtgcacgtgtccgggttcgacctgaacggc
cgggacatgcgtgtcacccggcaggccgtgcaccgcgtccgccgcaccggggccacctcg
cgcatccgccgccacgccaccctcaccgaccgcgagatggaggagatcgtcgacaaggcc
gacgcctggcgcgacaccgagaccgagcgcggcttctccatggccctggaccggctcggc
gaccccagcgacggcgactgcctcctcgtggaggccctgagcgaggacggcaggctgctc
gccctgctctccttcgtgccctggggccgcggcggcgtctccctggacctgatgcgccgt
gaccgcagcgcccccaacggggtgatggagttcatggtcgccgaactgtgcgcggccgcc
ccgaagctgggggtgcgcaggatctcgctgaacttcgccgtcttccggtcggtgttcgag
gagggcgcccgcatcggcgcgggcccggtgctgaggctgtggcgccggctgctgctgttc
ttctcccgctggtggcagctggaggccctctaccgctccaacgccaagtaccgcccggag
tggtacccgcgcttcatctgctacggcgagaccgcctccctcgcccgcatcggcctcgcc
tccgccatcgccgaggggttcgtctccgtgccttcgctgcgcaaactctggggaaagggg
cacccgaagacagggcagcggcccgccaccaccgagggcctgccgcccctggcggcgctc
ggcctcgacggaggggacgaggccgggaccgccgtcccggacgcgggcctgtccgaccag
gtccgcgtccggctccgcaagctcgaccggctgcgcgccaccggcaccgacccgtacccg
gtcggcggtcccaccccgacccacgccctcgccgacgtcccgcacggcggggacgtcacc
gtggcaggccgggtcatgctggtccgcgacttcggcggcatcgtcttcgccgtgctgcgg
gactggtccggggaccgtcaactcgccctcatccgcgaccggtccggcgccgccctcgac
cgtttccgggacacggccgacatcggcgaccacatcaccgccaccggccgcgcgggggtg
agcgacaagggcgagcccaccgtcttcgtcacctcgtggcacctggccggcaagtgcctg
cacccgctgcccgacaagcgccgcggcctcgccgaccccgaggcccgggtccgccgccgc
tacctcgacctggtcaccagccccgccgcccgccaggtggtccgcacccgctccaccgtc
gtccaggccctgcgccagggcctgctggaccgcggctacgtcgaggtcgagacgccgatg
ctgcagcagatccacggcggcgccaacgcacgccccttcaccacccacatcaacgcctac
gacctcgacctctacctgcgcatcgcgcccgagctgtacctcaaacggctgtgcgtgggc
ggcctggagcgggtcttcgagatgggccgcaccttccgcaacgagggcgtctcctacaag
cacaaccccgagttcacgatgctggaggcctaccaggcgcacgccgactacgacgtgatg
cgcgacctggcccgtgagctgatccagggcgcggcgaccgccgccttcggctccgcggtc
gcccgcaaggacggccgggagtacgacatctcgggggactggcccgtgaagacggtccac
ggggcgctctccgaggccctgggcgaggagatcggccccggcaccgaactgctcaggctg
caccggctgtgcgaccgcacgggcgtgccgtacacccccgacgacaccccgggcgacgtg
gtcctggagatgtacgagcggctggtcgaggagcgcacccggctgcccacgttctacaag
gacttccccaccgaggtctccccgctcacccggcagcaccgcgccgacccgcgcctcgcc
gagcgctgggacctcgtcgccttcggcaccgaactcggcaccgcctactccgaactgacc
gaccccgtcgaacagcgccgccggctcaccgagcagtccctgctggccgcgggcggcgac
cccgaggccatggagctcgacgaggacttcctcgacgccctggagtacgcgatgccgccg
accggcggcctcggcatcggcgtcgaccggctggtcatgttcctcaccggcctcaccatc
cgcgagaccctgcccttcccgctggtgcgccgccgctag
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