KEGG   Streptomyces collinus: B446_31965
Entry
B446_31965        CDS       T02787                                 
Name
(GenBank) excinuclease ABC subunit A
  KO
K03701  excinuclease ABC subunit A
Organism
sci  Streptomyces collinus
Pathway
sci03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:sci00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    B446_31965
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sci03400]
    B446_31965
DNA repair and recombination proteins [BR:sci03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     B446_31965
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      B446_31965
SSDB
Motif
Pfam: UvrA_DNA-bind ABC_tran AAA_21 AAA_29 DnaJ_CXXCXGXG AAA_16 nSTAND1 RsgA_GTPase AAA_33 AAA_22 AAA_18 ATPase MeaB Viral_helicase1
Other DBs
NCBI-ProteinID: AGS73197
UniProt: S5VRA1
LinkDB
Position
complement(7400088..7402418)
AA seq 776 aa
MHSPHDPYVRVRGAREHNLKGVDVDVPRDVLAVFTGVSGSGKSSLAFGTVYAEAQRRYFE
SVAPYARRLIHQVGAPKVGEITGLPPAVSLQQRRSAPTSRSSVGTVTNLSNSLRMLFSRA
GKYPPGAARLDSDAFSPNTAAGACPECHGLGRVHGTTEELLVPDPSLSIREGAVAAWPGA
WQGKNLRDILDTLGHDVDRPWRELPAADREWILFTDEQPVVTVHPVRDAERIQRPYQGTY
TSARRYVLKTFSDTKSPTLRAKAERFLTSTPCRVCGGSRLRPEALAVTFGGRNIAELAAL
PLTDLAALLDGRTETARVLTGDLKARIGPVVELGLGYLSLDRAAPTLSAGELQRLRLATQ
LRSGLFGVVYVLDEPSAGLHPADTEALLTVLDRLKAAGNSVFVVEHHLEVVRGADWLVDV
GPGAGEHGGRVLYSGPVAELASVEESATARYLFDEAPGPAREVREPRGWLEVGPVTRHNL
HAVTAGFPLGAFTAVTGVSGSGKSTLIGELTGDLPGVGRLVRVDQKPIGRTPRSNLATYT
GLFDVVRKVFAATGEARDRGYGVGRFSFNVAGGRCETCQGEGFVSVELLFLPSTYAPCPD
CGGARYNPETLQVAYRGRNIAEVLGLTVEEAAGFFADIPAALRSLGTLLDVGLGYLRLGQ
PATELSGGEAQRIKLAGELQRGRRGHTLYLLDEPTTGLHPADVEVLMDRLHGLVDAGHTV
VVVEHDMTVVAEADWVIDLGPGGGDRGGRVVAAGPPRRVACAEGSATAPYLARVMP
NT seq 2331 nt   +upstreamnt  +downstreamnt
atgcacagcccccatgacccgtacgtacgcgtgcgcggcgcccgcgagcacaacctcaag
ggcgtcgacgtggacgtcccgcgggacgtgctggccgtgttcaccggcgtgtccggctcg
ggcaagtcgtccctggccttcggcaccgtctacgccgaggcgcagcggcgctacttcgag
tcggtcgcgccgtacgcgcgccggctgatccaccaggtgggggcaccgaaggtcggcgag
atcaccgggctgccgcccgccgtctcgctgcagcagcgccgctccgcgcccacctcgcgc
tcctccgtgggcacggtcaccaacctctccaactccctgcgcatgctgttctcccgggcc
ggaaagtacccgccgggcgccgcacggctggactcggacgccttctcgccgaacacggcg
gcgggcgcctgtccggagtgccacggcctcggccgggtgcacggcaccaccgaggagctg
ctggtccccgacccctcgctgtcgatccgcgagggggccgtcgccgcgtggccgggcgcc
tggcagggcaagaacctgcgtgacatcctcgacacgctcggccacgacgtggaccggccc
tggcgcgaactgcccgccgcggaccgggagtggatcctgttcacggacgagcagccggtc
gtcaccgtgcacccggtccgggacgcggagcgcatccagcggccgtaccagggcacgtac
accagcgcccgccgctacgtgctgaagacgttctccgacaccaagtcgcccaccctgcgg
gccaaggcggagcgcttcctgaccagtacgccctgccgggtgtgcgggggcagcaggctg
cggcccgaggcgctggcggtcaccttcggcggccggaacatcgcggaactggccgcgctg
ccgctgaccgacctggccgctctgctcgacggccgcaccgagaccgcccgggtgctcacc
ggggacctgaaggcgcggatcgggcccgtcgtcgaactgggcctcggctacctcagcctg
gaccgggccgcccccaccctgtcggcgggcgagctgcaacggctgcggctggccacgcag
ttgcgctccgggctgttcggcgtcgtgtacgtgctggacgagccgtcggcggggctgcac
ccggcggacaccgaggccctgctcaccgtgctggaccggctcaaggcggccgggaactcg
gtgttcgtggtggagcaccacctggaggtggtgcgcggcgccgactggctggtggacgtc
ggtcccggcgcgggcgagcacggcgggcgggtgctgtacagcggcccggtcgcggagctg
gcctcggtcgaggagtcggccacggcccgctacctcttcgacgaggccccgggcccggcc
cgcgaggtccgcgagccgcgcggctggctggaggtcggcccggtgacccggcacaacctg
cacgcggtgacggccggcttcccgctcggcgcgttcacggccgtcaccggcgtctccggg
tccgggaagtccacgttgatcggcgagttgaccggggacctgcccggcgtcggccggctg
gtccgggtggaccagaagccgatcggccgcaccccgcgctccaacctggccacctacacg
ggcctgttcgacgtcgtgcggaaggtgttcgccgccaccggcgaggcccgggaccggggt
tacggcgtcggccggttctccttcaacgtcgcgggcgggcgctgcgagacctgccagggc
gaggggttcgtcagcgtggagctgctgttcctgccgagcacctacgccccctgcccggac
tgcggcggcgcacgctacaaccccgagacgctccaggtggcgtaccggggccggaacatc
gccgaggtcctcggtctcaccgtcgaggaggcggcggggttcttcgccgacatcccggcc
gcgctgcgcagcctgggcacgctgctggacgtcggcctgggctatctgcgcctcggccag
cccgcgaccgagctgtccggcggcgaggcgcagcggatcaagctggccggggaactgcag
cgcggccgccgcggccacaccctctacctcctggacgagccgacgaccgggctgcacccg
gccgacgtcgaggtgctgatggaccggctgcacggcctggtcgacgccgggcacaccgtc
gtcgtggtggaacacgacatgacggtggtcgcggaggccgactgggtgatcgacctgggg
ccgggcggcggcgaccggggcgggcgcgtcgtggcggccgggccgccgcggcgggtggcg
tgcgcggagggcagcgccaccgcgccctatctggcccgggtcatgccctga

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