Streptomyces collinus: B446_31965
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Entry
B446_31965 CDS
T02787
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
sci
Streptomyces collinus
Pathway
sci03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sci00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
B446_31965
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sci03400
]
B446_31965
DNA repair and recombination proteins [BR:
sci03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
B446_31965
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
B446_31965
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_DNA-bind
ABC_tran
AAA_21
AAA_29
DnaJ_CXXCXGXG
AAA_16
nSTAND1
RsgA_GTPase
AAA_33
AAA_22
AAA_18
ATPase
MeaB
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
AGS73197
UniProt:
S5VRA1
LinkDB
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Position
complement(7400088..7402418)
Genome browser
AA seq
776 aa
AA seq
DB search
MHSPHDPYVRVRGAREHNLKGVDVDVPRDVLAVFTGVSGSGKSSLAFGTVYAEAQRRYFE
SVAPYARRLIHQVGAPKVGEITGLPPAVSLQQRRSAPTSRSSVGTVTNLSNSLRMLFSRA
GKYPPGAARLDSDAFSPNTAAGACPECHGLGRVHGTTEELLVPDPSLSIREGAVAAWPGA
WQGKNLRDILDTLGHDVDRPWRELPAADREWILFTDEQPVVTVHPVRDAERIQRPYQGTY
TSARRYVLKTFSDTKSPTLRAKAERFLTSTPCRVCGGSRLRPEALAVTFGGRNIAELAAL
PLTDLAALLDGRTETARVLTGDLKARIGPVVELGLGYLSLDRAAPTLSAGELQRLRLATQ
LRSGLFGVVYVLDEPSAGLHPADTEALLTVLDRLKAAGNSVFVVEHHLEVVRGADWLVDV
GPGAGEHGGRVLYSGPVAELASVEESATARYLFDEAPGPAREVREPRGWLEVGPVTRHNL
HAVTAGFPLGAFTAVTGVSGSGKSTLIGELTGDLPGVGRLVRVDQKPIGRTPRSNLATYT
GLFDVVRKVFAATGEARDRGYGVGRFSFNVAGGRCETCQGEGFVSVELLFLPSTYAPCPD
CGGARYNPETLQVAYRGRNIAEVLGLTVEEAAGFFADIPAALRSLGTLLDVGLGYLRLGQ
PATELSGGEAQRIKLAGELQRGRRGHTLYLLDEPTTGLHPADVEVLMDRLHGLVDAGHTV
VVVEHDMTVVAEADWVIDLGPGGGDRGGRVVAAGPPRRVACAEGSATAPYLARVMP
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
atgcacagcccccatgacccgtacgtacgcgtgcgcggcgcccgcgagcacaacctcaag
ggcgtcgacgtggacgtcccgcgggacgtgctggccgtgttcaccggcgtgtccggctcg
ggcaagtcgtccctggccttcggcaccgtctacgccgaggcgcagcggcgctacttcgag
tcggtcgcgccgtacgcgcgccggctgatccaccaggtgggggcaccgaaggtcggcgag
atcaccgggctgccgcccgccgtctcgctgcagcagcgccgctccgcgcccacctcgcgc
tcctccgtgggcacggtcaccaacctctccaactccctgcgcatgctgttctcccgggcc
ggaaagtacccgccgggcgccgcacggctggactcggacgccttctcgccgaacacggcg
gcgggcgcctgtccggagtgccacggcctcggccgggtgcacggcaccaccgaggagctg
ctggtccccgacccctcgctgtcgatccgcgagggggccgtcgccgcgtggccgggcgcc
tggcagggcaagaacctgcgtgacatcctcgacacgctcggccacgacgtggaccggccc
tggcgcgaactgcccgccgcggaccgggagtggatcctgttcacggacgagcagccggtc
gtcaccgtgcacccggtccgggacgcggagcgcatccagcggccgtaccagggcacgtac
accagcgcccgccgctacgtgctgaagacgttctccgacaccaagtcgcccaccctgcgg
gccaaggcggagcgcttcctgaccagtacgccctgccgggtgtgcgggggcagcaggctg
cggcccgaggcgctggcggtcaccttcggcggccggaacatcgcggaactggccgcgctg
ccgctgaccgacctggccgctctgctcgacggccgcaccgagaccgcccgggtgctcacc
ggggacctgaaggcgcggatcgggcccgtcgtcgaactgggcctcggctacctcagcctg
gaccgggccgcccccaccctgtcggcgggcgagctgcaacggctgcggctggccacgcag
ttgcgctccgggctgttcggcgtcgtgtacgtgctggacgagccgtcggcggggctgcac
ccggcggacaccgaggccctgctcaccgtgctggaccggctcaaggcggccgggaactcg
gtgttcgtggtggagcaccacctggaggtggtgcgcggcgccgactggctggtggacgtc
ggtcccggcgcgggcgagcacggcgggcgggtgctgtacagcggcccggtcgcggagctg
gcctcggtcgaggagtcggccacggcccgctacctcttcgacgaggccccgggcccggcc
cgcgaggtccgcgagccgcgcggctggctggaggtcggcccggtgacccggcacaacctg
cacgcggtgacggccggcttcccgctcggcgcgttcacggccgtcaccggcgtctccggg
tccgggaagtccacgttgatcggcgagttgaccggggacctgcccggcgtcggccggctg
gtccgggtggaccagaagccgatcggccgcaccccgcgctccaacctggccacctacacg
ggcctgttcgacgtcgtgcggaaggtgttcgccgccaccggcgaggcccgggaccggggt
tacggcgtcggccggttctccttcaacgtcgcgggcgggcgctgcgagacctgccagggc
gaggggttcgtcagcgtggagctgctgttcctgccgagcacctacgccccctgcccggac
tgcggcggcgcacgctacaaccccgagacgctccaggtggcgtaccggggccggaacatc
gccgaggtcctcggtctcaccgtcgaggaggcggcggggttcttcgccgacatcccggcc
gcgctgcgcagcctgggcacgctgctggacgtcggcctgggctatctgcgcctcggccag
cccgcgaccgagctgtccggcggcgaggcgcagcggatcaagctggccggggaactgcag
cgcggccgccgcggccacaccctctacctcctggacgagccgacgaccgggctgcacccg
gccgacgtcgaggtgctgatggaccggctgcacggcctggtcgacgccgggcacaccgtc
gtcgtggtggaacacgacatgacggtggtcgcggaggccgactgggtgatcgacctgggg
ccgggcggcggcgaccggggcgggcgcgtcgtggcggccgggccgccgcggcgggtggcg
tgcgcggagggcagcgccaccgcgccctatctggcccgggtcatgccctga
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