Spermophilus citellus (European ground squirrel): 308630438
Help
Entry
308630438 CDS
T11988
Symbol
RIF1
Name
(RefSeq) telomere-associated protein RIF1 isoform 1
KO
K11138
telomere-associated protein RIF1
Organism
scil Spermophilus citellus (European ground squirrel)
Brite
KEGG Orthology (KO) [BR:
scil00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
308630438 (RIF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
scil03032
]
308630438 (RIF1)
DNA replication proteins [BR:
scil03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
308630438 (RIF1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rif1_N
Motif
Other DBs
NCBI-GeneID:
308630438
NCBI-ProteinID:
XP_081116593
LinkDB
All DBs
Position
11:56564348..56624265
Genome browser
AA seq
2481 aa
AA seq
DB search
MTAPGPSPLAPLLETLEDSSASLGEQTDAYLTLTSRMTGEEGKEVIIEIEKNLPRLYKVL
KSHISSQNSELCSAALQALGFCLYNPKITSGLSEANTQELLSKLNNIVKNSDKNVCTRAL
WVISKQTFPAEVVGKVVSSIIDSLEIVFNKGEIHSAVVDFEALNVIIRLIEQAPVQMGEE
SVRWAKLVIPLVAHSAQKVHLRGATALEMGMPLLLQKQQEIASITEQLMTTKLISELQKL
FMSKNETYVLKLWPLFVKLLGKTLHRSGSFINSLLHLEELGFRSGTPMIKKIAFIAWKSL
IDNFALNPDILCSAKRLKLLMQPLSSIHVRTETLALTKLEVWWYLLMRLGPHLPANFEQV
CVPLIQSTISTDSCVLPQGNSSRIATSPGLSPMTPVHKGASPYGVPGTPRMNMSSNLGGM
ATIPSIQLLGLEMLLHFLMGPEVLSFAKQHKLVLSLEPLEHPLISSPSFFSKHAHTLITA
VHDSFLAVGKDASDAVVSAVWKELISLVKSVTESGNRKERSGSEVLTLLLKSLESIVKSE
VYPVSKTLVLMEITIQGLPQKVLGSPAYQVANMDILNGTPALFLIQLIFNNNLLECVADE
RFFLNLETLVGYVLSGPTSPLAFSDSVLNVINQNAKELENKEHLWRMWSIIVTPLTEMIN
QTNEVNQGDALEHNFSAIYGALTLPINHIFSIQKFPLATTKTLLRSWSELYRAFARCAAL
VATAEENLCCEELSSKIMSSLEDESLSNLLYLDRIVHIINVMVDCIDFSPYNIKYQPNVK
SPQRSSDWSKKKKEPLGKLASLFKLIVKVIYSFHTLSFKEVYSDTLLAIGTSITNMLSNV
FGHISLPSMIRKIFATLTRPLALFYENSKLDEVPKVYSCLNNKLEKLLGEITACLQYSYT
GIYDSELLEQLSPLLCIIFLHKNKQIRKQSAQFWNATFAKVTMLTYPEELKPVLRQAKQT
LLLLLPGLESVEIMEESSGPYSEVMENSQLNVKISGMERKSSGKRDSFLTQTKDKKENVK
PSVKLKLESSSPKVKSEMLLEEEKSEDFVFIPPEEKEAKERILTEHQKEVLKTKRCDIPA
MYNNLDVSQDTLFSSHYSQEESVETPNSSEKPMEDSEMIIKEKQMQHDSVIPQDTKENCG
MNEHLENASVSNNGCSSVEETNPEVLMTSSNDVRKITLTSSKKASAECIPNAESSFVVNS
SVSNSSISGTPPQPTSRRQTFITLEKFDGSENRPFSPSPLNSISSVVTVKNNQENMTKTD
TTLKTKKREVTQSKSDSEKVVNGVKRSSRRSSKAEQSGNKKSKPLMKSEEEKNTQESTED
MIALENNPSSLLNQTECVQNNQDHLSEPTVEYEDTKPKSTIENDVVLENNSVEEKNGEVN
LESKENTPPVIIPADQMVNEENQVQITSNQKTLRRSSRRRSEIVESTTDSQDKENSHQKK
ERRKEEEKSLQKSPLHVKDDVLPRQKLTSEHAVQENLVEKGNNLHEKTLGETSANAEIDQ
NKRKPDLENISSEADGAQDIADKSSEKPLRGRTRYQTRRASQGLLFSIENSESDSSEAKE
EGSRKKRSAKWKNKSNDSVDMEEQEEKMVQECIKVENQTPESKAISEVDMKSQICETGES
TVIIPQESKISSDLLQVSDDVPNTHEGKSKTSKCTENSFTWPPVPESNLRTRNANKRLHK
GDSDSVGECSKVGPSSIALLSEKSIQIVECQHKRSRRVRRSKGCDCCREKSQPQENSFIG
LRNIENDDEKNSETKADVQTPGTVSKTCDANLHSEVKILDEHPSVNFDLGLKEENDTIND
LVIVPATELKENTIEKSVPPEIVNFKEGTCDMDSGVATCLENEEPSNVLKVVGPCACDSM
DISQKCSPLDTKERKREFSPEEVNIVNVEGNACKATVGSNLEEVEAMVLDIKSDKSETSL
EKDKSEANLVEKKSAKIDISEEMVAEGNTKSGIPEADKAEEVNAEELNAEAAAAQEYNSG
TGLSDNTTPINVNPQAEISEQKANGKLGGGSNESDLGSLEEINSEIENYEKTVIEQVNSK
TDSVEETKDRDRTTKTFKPEEAQTERLNVETDNFIPDTFEMNTEEGKIECNKTETNIELN
KSEEMKLDDNQVVVGNDTLQEVHHTSETMEETLQSSSSETAISELVTEDNNASPQKLREL
DPLLLSANDSPSGMQTRCVWSPLASPSTSILKRGLKRPQEDEISSPVNKVRRVSFADPIY
QAGLADDIDRRCSIVRSHSSSSSPIMKNVKTSPTAQSKHNTTSAKGFLSPGSRSSKFKSS
KKCLITEMAKESIPCPTESVYPALVNCAAPVDIILPQITSNMWARGLGQLIRAKNIKTIG
DLSSLTASEIKTLPIRSPKVSNVKKALRVYHEQQVKSRGLEEIPIFDITEKAVNGIENKS
LSTDEERLASDLLDPVPFETPLSKNLVAQISALALQLDAEDLHSYSGSQLFEMHEKLGTM
ANSIIKNLQSRWRSTAHENSI
NT seq
7446 nt
NT seq
+upstream
nt +downstream
nt
atgacggccccaggtccgagccctctcgcgccgctgttggagacactggaagactcttcc
gcctccctgggcgagcagacagatgcctacctaactttgaccagtcggatgactggagaa
gaaggaaaagaagtcatcatagaaattgagaaaaatcttcctcggctgtacaaagtttta
aagagtcatatttccagtcaaaactcagaactgtgtagtgctgctctacaggccttgggg
ttttgcttatataatcccaaaattacttcaggattatcagaggcaaatactcaagaattg
ctttcaaaattgaataatattgttaagaattcagacaaaaatgtatgcaccagggcactt
tgggtaatatccaaacagacgttccccgctgaagttgttggaaaagtggtatccagtata
attgactcattagaaatagtatttaataaaggagagatacattctgccgttgttgatttt
gaagcattaaatgttatcataaggctaattgaacaagctccagttcaaatgggagaagag
tcagtgaggtgggcaaaattggtcatacctttagtggctcattcagcacaaaaggttcat
ttgaggggagccactgctctggagatgggaatgccattgttgcttcagaaacaacaagaa
atagcatctattacagagcagcttatgactactaaattaatttcagaactccaaaagtta
tttatgagtaaaaatgagacctacgtgttaaaattgtggcctttgtttgtcaaacttctt
ggaaagactttgcatcgaagtggaagtttcatcaattctttgttacatttggaggaactg
ggatttcgtagcggaacacccatgattaaaaaaatagcttttattgcatggaagagctta
atagataattttgccttaaatccagatattctgtgtagtgcaaaaagactcaagttgtta
atgcagcctttgagttccatccatgtgagaacagaaactctagcattaacaaagctagaa
gtctggtggtatttactgatgagacttggacctcatctccctgcaaattttgaacaggtt
tgtgttcctctgattcagagtacaattagcactgattcttgtgtcttacctcaaggcaat
tcatctcgtatagctacttctccaggtttaagtcctatgactcctgtacacaaaggtgct
tccccctatggagttcctggaactccacgcatgaacatgagttcaaatttaggtggaatg
gccacaatcccttccattcaacttttgggacttgaaatgttgcttcattttttgatgggt
ccagaagtattgagttttgctaagcagcacaaacttgtgttgagcttagagccacttgaa
catccattaatcagcagcccttcatttttttccaagcacgcacatacacttattactgcc
gtacatgatagctttcttgcagttggaaaggatgcttctgatgcagttgtcagtgctgtc
tggaaggagctaattagcttggtgaaatcagttactgaatcaggtaacagaaaagaaaga
tcagggtctgaagttctgaccctcctactaaaatctttggaaagtatagtaaagtcagaa
gtatatcctgtgtcaaaaacattggtcctcatggaaattacaattcaaggacttcctcag
aaagtattaggttcaccagcatatcaggttgctaatatggatattcttaatggaactcca
gctttgttcttaattcagttaattttcaacaataatctcctggaatgtgtagcagatgaa
aggttttttctcaatcttgaaacacttgtaggttatgtgctttctggtccaacttcacca
ttagcttttagtgactcagtattaaatgttattaatcaaaatgcaaaggaattggaaaac
aaggagcatctctggagaatgtggagtattatagtcacgccattaactgaaatgattaat
cagaccaatgaagtgaatcaaggtgatgcattagaacataattttagtgccatctatggt
gcacttactttgccaatcaaccatattttttcaatacagaaatttcctctggctaccacg
aagactttacttagaagttggtcagaattatatagagcatttgctcgctgtgctgccttg
gtggcaacagcagaagagaatttgtgctgtgaagaactttcttccaagataatgtccagt
ttggaagatgaatcgctttcaaatttgttgtacttggacaggattgttcatattattaat
gtaatggttgattgcatcgatttttcaccatataatattaaatatcagcccaacgttaaa
tcaccacagagatcttcagattggtccaaaaagaagaaggagcccctagggaaattggct
tctttatttaaacttattgtgaaagtgatctattctttccacactctgagcttcaaagaa
gtatattctgatactctacttgctattggcacctcgatcaccaacatgctttccaatgtt
tttggacatatttctctgccatctatgatccgaaaaatatttgcaactttaacaagaccc
ctggcattattttatgaaaactcaaagcttgatgaagttccaaaagtgtacagttgtctg
aacaacaagttagaaaagctcttaggagaaattactgcttgtctacagtatagctacact
ggaatttatgacagtgaacttcttgaacagctttctccactgctctgtataatatttttg
cacaagaataaacagattcgaaaacaaagtgctcagttctggaatgccacatttgctaaa
gtgacgatgttgacttaccctgaggaattaaaaccagtactaagacaagccaaacagaca
cttttacttctcttgcctggtttggaaagtgttgaaatcatggaggaatccagtggacca
tattcagaagtaatggaaaactcacaattaaatgtgaagataagtggtatggaaagaaaa
tcaagtggaaaaagagattcctttttgacacaaacaaaggataagaaagaaaatgtgaaa
ccatcagtcaaactaaaattagaatcttcatctccaaaagtaaagagtgaaatgctgttg
gaagaggaaaagtcagaagattttgtgtttattcctccagaagaaaaagaagcaaaggaa
agaatattaactgaacatcaaaaagaagtactcaaaacaaaacggtgtgatattcctgcc
atgtataataatctggatgtttcacaagataccttattttctagtcattatagtcaggaa
gagtctgtggaaacacctaattcaagtgaaaaaccaatggaagattctgagatgataatt
aaggaaaagcaaatgcagcatgacagtgttattcctcaagataccaaggaaaactgtggt
atgaatgaacatcttgaaaacgcttctgtttcaaataatggatgtagttctgttgaggaa
accaatccagaagtattaatgactagtagtaatgatgtcagaaaaatcaccttaacttca
tcaaagaaagcttcagctgaatgtatacctaatgcagaaagttcatttgttgtcaacagc
tcagtttctaattcctctatttctggaactcccccacagcctacaagtcgaaggcaaacc
tttattacgttagaaaagtttgatggttcagaaaatagacctttcagcccgtccccctta
aatagtatatcatcagttgttacagtgaaaaataaccaggaaaacatgactaaaacagat
actactttaaaaacaaagaaaagagaagtgactcaatcaaaatctgattcagagaaagtg
gtgaatggagttaagagatcaagccggagatctagtaaagctgagcagtctgggaataaa
aagtctaagcccttaatgaaatctgaagaagagaaaaatactcaggaatctaccgaagac
atgatagccttagaaaataacccatctagtttgcttaatcaaacagaatgtgtgcagaat
aatcaggatcatctttctgaacctacagtggagtatgaagacacaaagcctaaatcaaca
atagaaaatgatgtagtgttggaaaataatagtgtggaagagaaaaatggagaggttaat
ttggaatccaaagaaaatacacccccagtcataataccagcagatcaaatggtaaatgaa
gagaatcaggttcagataacttcaaaccaaaaaacccttagacgatcttcaaggcgacgt
tcagaaatagtagagtcaaccactgatagccaagataaagaaaatagtcaccaaaaaaag
gaaagacgtaaggaagaagaaaaatctcttcaaaagagtccattgcatgtaaaagatgat
gtgttacctaggcaaaaactgacttctgaacatgcagtacaggaaaatttagttgagaaa
ggaaataatttacatgagaaaactttgggggaaaccagtgctaatgctgaaattgaccaa
aataaaagaaaaccagaccttgagaatattagttctgaagcagatggtgcccaggacatt
gctgacaagtcctctgagaaacctttaaggggacgaacgcgttatcaaacaagaagagca
tctcagggtttgcttttcagcattgagaactcagaatctgatagttctgaggcaaaagaa
gaaggatcaaggaagaagagatctgcaaagtggaaaaacaaaagtaatgatagtgttgac
atggaagaacaagaagaaaaaatggtacaagagtgtataaaagttgaaaaccagacacct
gagtctaaagcaatttctgaagtagatatgaaatctcagatttgtgaaacaggtgaaagt
actgtgataatacctcaggaatctaaaatatcttcagatttgttgcaagtttctgatgat
gtaccaaatacacatgaaggaaaaagtaagactagcaaatgcacagaaaattcctttaca
tggccacctgtgccagaatcaaatctaaggactagaaatgccaataaaaggttacataag
ggagattctgatagtgtgggagagtgttcaaaagtggggccatcaagcattgctctgctt
tctgaaaaaagtattcaaattgttgaatgccagcacaagagaagtaggagggtcaggcga
tctaaaggttgtgactgctgtagggaaaaatcacagccccaggaaaattcatttattggg
ttaaggaacatagaaaatgatgatgaaaagaatagtgaaacaaaagcagatgtgcagaca
cctggaactgtatcaaaaacttgtgatgctaatctgcattctgaagtaaaaattttagat
gaacatcccagtgtgaattttgatttgggtctcaaagaggagaatgatactataaatgat
ttagtaattgtacctgcaactgaattgaaagaaaatactattgaaaaatctgttcctcct
gaaatagtaaattttaaggagggcacttgtgatatggattctggtgtggcaacgtgtctt
gaaaatgaggagccatctaatgtattaaaagttgtgggcccatgtgcatgtgattccatg
gacatttcacagaaatgttctcctttggacactaaagaaaggaaacgagagttttctcca
gaagaagttaacattgttaatgttgaaggaaatgcatgtaaagcaacagtgggatcaaat
ctggaagaagtagaagctatggtattggatataaaaagtgataaatctgaaactagctta
gaaaaagataaatctgaagctaacttggttgagaaaaagagtgccaaaatagatatttct
gaagaaatggtagcagagggaaatactaaaagtggcatacctgaagcagataaagctgaa
gaagtcaatgctgaagaattgaatgctgaagcagctgcagcacaggaatataactcaggt
actggtctttctgataataccacacctataaatgtgaatcctcaggcggagatttctgaa
caaaaagcaaacgggaaattgggtggaggaagtaatgaatctgatctaggctcacttgaa
gaaatcaattctgaaattgaaaattatgaaaaaacagtgattgagcaggtgaattctaaa
actgacagtgttgaggaaacaaaggacagggacaggactaccaaaacctttaagccagaa
gaagctcaaacagaaagattgaatgtagaaactgacaactttattcctgacacatttgaa
atgaacactgaagaaggaaagattgaatgtaataaaactgaaactaatattgaacttaat
aaatctgaagaaatgaaattagatgacaatcaagtggtagtaggaaatgatactttacag
gaagttcatcatacttcagagacaatggaggaaacattacagtcttcgtcatctgaaaca
gctatctctgaactggtaacagaagataataatgcatctcctcaaaaattaagggagctt
gatcctttacttttgtctgcaaacgacagtcctagtggtatgcaaacacgatgtgtctgg
tccccattggcttctccatctaccagcattttaaagagaggactgaaaagaccccaagaa
gatgagatctcttcacctgttaataaggttcgacgtgtctcatttgcagatccaatatac
caagcaggattggcagatgacattgataggcgatgttccattgttaggtcccattcttca
agtagttctcccataatgaaaaatgttaaaacatcacctactgcacaatctaagcataat
accacttcagctaaaggatttctgtccccaggatcacgtagctctaaatttaagagctca
aagaagtgtttaataacagaaatggccaaagaatccattccttgcccaacagaaagtgtt
tacccagctttggtgaactgtgcagcaccagttgacatcattttgcctcagataacatca
aatatgtgggcaagaggcctaggacaacttatcagagccaagaatataaaaacaattggc
gatctgagttctcttacagcatctgaaataaaaactcttcctatccggtctcccaaagtt
tctaatgtaaaaaaggctcttagagtgtatcatgaacagcaggtaaaatctcgtggatta
gaagagattccaatttttgatattactgaaaaagcagtaaatggaatagaaaataagtct
ctctcaactgatgaagaacgacttgcctcagatttacttgatcctgttccctttgaaact
ccattatctaaaaatcttgttgcacagattagtgctcttgctcttcaactggatgcagaa
gatctccacagttattcaggaagccagctatttgaaatgcatgagaaacttggtactatg
gcaaactctataataaaaaatctgcagtcacgatggagatcaacagcccatgaaaattcc
atttag
DBGET
integrated database retrieval system
