KEGG   Spermophilus citellus (European ground squirrel): 308630779
Entry
308630779         CDS       T11988                                 
Symbol
ITGA6
Name
(RefSeq) integrin alpha-6 isoform 1
  KO
K06485  integrin alpha 6
Organism
scil  Spermophilus citellus (European ground squirrel)
Pathway
scil04151  PI3K-Akt signaling pathway
scil04382  Cornified envelope formation
scil04510  Focal adhesion
scil04512  ECM-receptor interaction
scil04514  Cell adhesion molecule (CAM) interaction
scil04518  Integrin signaling
scil04640  Hematopoietic cell lineage
scil04810  Regulation of actin cytoskeleton
scil04820  Cytoskeleton in muscle cells
scil05145  Toxoplasmosis
scil05165  Human papillomavirus infection
scil05200  Pathways in cancer
scil05222  Small cell lung cancer
scil05410  Hypertrophic cardiomyopathy
scil05412  Arrhythmogenic right ventricular cardiomyopathy
scil05414  Dilated cardiomyopathy
Brite
KEGG Orthology (KO) [BR:scil00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04151 PI3K-Akt signaling pathway
    308630779 (ITGA6)
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    308630779 (ITGA6)
   04514 Cell adhesion molecule (CAM) interaction
    308630779 (ITGA6)
   04518 Integrin signaling
    308630779 (ITGA6)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    308630779 (ITGA6)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    308630779 (ITGA6)
   04810 Regulation of actin cytoskeleton
    308630779 (ITGA6)
 09150 Organismal Systems
  09151 Immune system
   04640 Hematopoietic cell lineage
    308630779 (ITGA6)
  09158 Development and regeneration
   04382 Cornified envelope formation
    308630779 (ITGA6)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    308630779 (ITGA6)
  09162 Cancer: specific types
   05222 Small cell lung cancer
    308630779 (ITGA6)
  09172 Infectious disease: viral
   05165 Human papillomavirus infection
    308630779 (ITGA6)
  09174 Infectious disease: parasitic
   05145 Toxoplasmosis
    308630779 (ITGA6)
  09166 Cardiovascular disease
   05410 Hypertrophic cardiomyopathy
    308630779 (ITGA6)
   05412 Arrhythmogenic right ventricular cardiomyopathy
    308630779 (ITGA6)
   05414 Dilated cardiomyopathy
    308630779 (ITGA6)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:scil04147]
    308630779 (ITGA6)
   04515 Cell adhesion molecules [BR:scil04515]
    308630779 (ITGA6)
   04090 CD molecules [BR:scil04090]
    308630779 (ITGA6)
Exosome [BR:scil04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   308630779 (ITGA6)
  Exosomal proteins of breast milk
   308630779 (ITGA6)
Cell adhesion molecules [BR:scil04515]
 Integrins
  Integrin alpha subunits
   308630779 (ITGA6)
CD molecules [BR:scil04090]
 Proteins
  308630779 (ITGA6)
SSDB
Motif
Pfam: Integrin_A_Ig_3 Integrin_A_Ig_1 Integrin_A_Ig_2 FG-GAP FG-GAP_3 Integrin_alpha LRR19-TM DUF4381
Other DBs
NCBI-GeneID: 308630779
NCBI-ProteinID: XP_081117536
LinkDB
Position
11:75927483..76004509
AA seq 1091 aa
MAAAGKLCLLYLSAGLLPRLGAAFNLDTREDNVIRKSGDRGSLFGFSLAMHWQLQPEDKR
LLLVGAPRAEALPLQRANRTGGLYSCDITSRGPCTRIEFDNDADPTSESKEDQWMGVTVQ
SQGPGGKVVTCAHRYEKRQHVNTKQESRDIFGRCYVLSQNLKIEDDMDGGDWSFCDGRLR
GHEKFGSCQQGVAATFTKDFHYIVFGAPGTYNWKGIVRVEQKNNTFFDMNIFEDGPYEVG
GETDHDESLVPVPANSYLGFSLDSGKGIVSKDEITFVSGAPRANHSGAVVLLKRDMKSAH
LLPEHIFDGEGLASSFGYDVAVVDLNKDGWQDIVIGAPQYFDRDGEVGGAVYVYINQQGR
WNNVKPIRLNGTKDSMFGIAVKNIGDINQDGYPDIAVGAPYDDLGKVFIYHGSANGINTK
PTQVLEGTTPSFGYSIAGNMDLDRNSYPDVAVGSLSDSVAIFRSRPVINIAKTITVTPSR
IDLRQKTACGAPSGICLKVKACFEYTAKPAGYNPSISIVGTLEAEKERRKSGLSSRVQFR
NQATEPKYTQELTLNRQKQRVCMEETLWLQENIRDKLRPIPITASVEIQEPSSRRRVNSL
PEVLPILNSNEPRMAHTDVHFLKEGCGDDNVCNSNLKLEYKFCTREGNQDKFSYLPIQKG
IPELVLKDQKDIALEITVTNSPSNPRDPTKDGDDAHEAKLIATFPDTLTYSAYRELRAFP
EKQLSCVANQNGSQADCELGNPFKRNSSVTFYLILSTTEVTFDTTDLDINLQLETTSNQD
NLASITAKAKVVIELLLSVSGVAKPSQVYFGGTVVGEQAMKSEDEVGSLIEYEFRVINLG
KPLKNLGTATLNIQWPKEISNGKWLLYLVKVESKGLEKIVCEPQSEINLLNLKESHNSRK
KRAIAEKQIDDSRKFSLFAERKYQTLNCSVNVRCVNIRCPLRGLDSKASLVLRSRLWNST
FLEEYSKLNYLDILVRASIDVTDAAENIKLPNAGTQVRVTVFPSKTAAQYSGVPWWIILV
AILAGILMLALLVFLLWKCGFFKRSRYDDSVPRYHAVRIRKEEREIKDEKYNDNLEKKQW
VTKWNENESYS
NT seq 3276 nt   +upstreamnt  +downstreamnt
atggcggccgcggggaagctgtgcctgctctacctgtcggcggggctcctgccccggctc
ggcgcagccttcaacttggacacccgcgaggacaatgtgatccggaaatctggggatcgc
gggagcctcttcggcttctcgttggccatgcactggcagctacagccagaggacaagcgg
ctgttgctggtgggagcacctagggcagaagcccttccgctgcagagggccaacaggact
ggaggtctgtacagctgtgacatcacctcccgaggaccttgcactcggattgaatttgat
aacgatgctgaccctacctcagaaagcaaggaagatcaatggatgggggtcactgtccag
agtcaaggtccagggggcaaagtggtgacatgtgctcatcgatatgaaaaaaggcaacat
gttaacacaaagcaggagtctcgagacatctttgggaggtgttatgtcctgagtcagaat
cttaagattgaagatgatatggatggaggagactggagtttttgtgatggccgattaaga
ggtcatgaaaagtttggttcttgccagcaaggtgtagcagctacttttactaaagacttt
cattacattgtgtttggagccccgggtacttataactggaaagggattgttcgagtagag
caaaagaataacactttttttgacatgaacatctttgaagatgggccttatgaagttggt
ggagagactgaccatgatgaaagtctcgttcctgttcctgctaacagttatttaggcttt
tctttggactcagggaaaggtattgtttctaaagatgagataacttttgtgtctggtgca
ccaagagccaatcacagtggagctgtggttttgctaaaaagagacatgaagtctgcacat
cttctccctgagcacatatttgatggagaaggtctggcctcttcatttggctatgatgtg
gcagtggtggacctcaacaaagacgggtggcaagatatagtaattggagccccacagtat
tttgacagagatggagaagttggaggtgcagtgtatgtctacattaaccagcaaggcaga
tggaataatgtcaagccaattcgtcttaatggaaccaaagattctatgtttggcattgca
gtaaaaaatattggagatattaatcaagatggctatccagatattgcagttggagctccc
tatgatgatttggggaaggtttttatctatcatggatccgcaaatggaataaataccaaa
ccaacacaggttcttgagggtacaacaccttcttttggatattcaattgctggaaatatg
gatcttgatagaaattcctatcctgatgttgctgttggttccctctcggattcagtagct
attttcaggtcccggcctgtgattaacattgcgaaaactatcacagtaactcctagcaga
attgacctccgccaaaaaacagcgtgtggggcgccaagtggaatatgcctcaaggttaaa
gcctgttttgaatatactgccaaacccgctggttataatccttcaatatcaattgtgggc
accctggaagctgaaaaagaaagaaggaaatctgggctgtcatccagagttcagtttcga
aaccaagctactgagcccaagtacactcaagaactgactttgaataggcagaagcagcgg
gtttgcatggaggaaaccctctggctgcaggaaaacatcagagacaaactgcgccccatc
cccataactgcttccgtggagatccaggagcccagctctcgcaggcgagtgaattcacta
ccagaagttcttccaatcctgaattcaaacgaacccaggatggctcacacagatgtgcac
ttcttaaaagagggatgtggagacgacaatgtatgtaacagcaaccttaaactagaatat
aaattttgtacccgagaaggaaatcaagacaaattttcttaccttccaattcaaaaaggt
ataccagagctagttttaaaagatcagaaagatattgctttggaaataacagtgacaaat
agcccttccaacccaagagatcccacaaaagatggtgatgatgcccacgaagccaaactc
attgcaacgtttccggacactttgacctattctgcttatagagagctgagggctttccct
gagaaacagttgagttgtgttgccaaccagaatggttcccaagctgactgtgagctcgga
aatccttttaaaagaaattccagtgttactttttacttgattttaagtacaactgaggtc
acctttgacaccacagatctggacattaacctgcagttggagacaacgagcaatcaagat
aatttggcttcaattacagctaaagcaaaagtggttattgaactgcttttatcggtctct
ggagttgctaaaccttcccaggtgtattttggaggtacagttgtcggggagcaagctatg
aaatctgaagatgaagtaggaagtttgatagagtatgaattcagggtgattaatttaggt
aaacctcttaaaaacctcggcacggcaaccttgaatattcagtggccaaaagaaattagc
aatggcaaatggttgctttatttggtgaaagtagaatccaaaggattggaaaagatagtg
tgtgagccacaaagtgaaataaacctcctgaacctaaaggagtctcacaactcaagaaaa
aaacgggcaattgctgaaaaacagattgatgatagcagaaaattttctttatttgctgaa
agaaaataccagaccctgaactgtagtgtgaacgtgaggtgtgtgaacatcaggtgtcct
ctgcgtgggctggacagcaaggcctcccttgttttgcgctcaaggttatggaacagcaca
tttctagaggaatattccaaactgaactacttggacattcttgtgcgagcttctattgat
gtgactgatgccgctgagaatatcaagctgccaaatgcaggcacccaggttcgtgtgact
gtgtttccctcaaaaactgcagctcagtactccggagtaccttggtggatcattcttgtg
gctattcttgctgggattttgatgcttgctctattagtgtttttactatggaagtgtgga
ttctttaagcgctctaggtacgatgatagcgttccccgataccatgctgtaaggatccgt
aaagaagagcgagagatcaaagatgaaaaatacaatgataaccttgaaaaaaaacagtgg
gtcacaaagtggaatgaaaatgaaagttactcctag

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