Spermophilus citellus (European ground squirrel): 308631044
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Entry
308631044 CDS
T11988
Symbol
ITGB6
Name
(RefSeq) integrin beta-6 isoform 1
KO
K06589
integrin beta 6
Organism
scil Spermophilus citellus (European ground squirrel)
Pathway
scil04151
PI3K-Akt signaling pathway
scil04510
Focal adhesion
scil04512
ECM-receptor interaction
scil04518
Integrin signaling
scil04810
Regulation of actin cytoskeleton
scil04820
Cytoskeleton in muscle cells
scil05165
Human papillomavirus infection
scil05410
Hypertrophic cardiomyopathy
scil05412
Arrhythmogenic right ventricular cardiomyopathy
scil05414
Dilated cardiomyopathy
Brite
KEGG Orthology (KO) [BR:
scil00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
308631044 (ITGB6)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
308631044 (ITGB6)
04518 Integrin signaling
308631044 (ITGB6)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
308631044 (ITGB6)
09142 Cell motility
04820 Cytoskeleton in muscle cells
308631044 (ITGB6)
04810 Regulation of actin cytoskeleton
308631044 (ITGB6)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
308631044 (ITGB6)
09166 Cardiovascular disease
05410 Hypertrophic cardiomyopathy
308631044 (ITGB6)
05412 Arrhythmogenic right ventricular cardiomyopathy
308631044 (ITGB6)
05414 Dilated cardiomyopathy
308631044 (ITGB6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
scil04147
]
308631044 (ITGB6)
04515 Cell adhesion molecules [BR:
scil04515
]
308631044 (ITGB6)
Exosome [BR:
scil04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
308631044 (ITGB6)
Cell adhesion molecules [BR:
scil04515
]
Integrins
Integrin beta subunits
308631044 (ITGB6)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Integrin_beta
Integrin_b_cyt
PSI_integrin
EGF_integrin
Integrin_B_tail
I-EGF_1
EGF_2
EGF_Teneurin
vWA_SIBA-E
EGF_TEN
Motif
Other DBs
NCBI-GeneID:
308631044
NCBI-ProteinID:
XP_081118030
LinkDB
All DBs
Position
11:complement(64444404..64569426)
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AA seq
787 aa
AA seq
DB search
MGIELLCLFFLFLGRNDRAQGGCALGGAETCGDCLLIGPQCAWCSQENFTHPSGVGERCD
TPANLLAKGCQLTFIENPVSQIEILKNKPLSVGRQKNSSDIVQIAPQNLILKLRPGGEQT
LQVQVRQTEDYPVDLYYLMDLSASMDDDLNTIKELGSLLSKEMSKLTSNFRLGFGSFVEK
PVSPFMKTTPEEIANPCSSIPYFCLPTFGFKHILPLTNDAERFNEIVKNQKISANIDTPE
GGFDAIMQAAVCKEKIGWRNDSLHLLVFVSDADSHFGMDSKLAGIVIPNDGLCHLDNKNE
YSMSTVLEYPTIGQLIDKLVQNNMLLIFAVTQEQVHLYENYAKLIPGATVGLLQKDSGNI
LQLIISAYEELRSEVELEVLGDTEGLNLSFTAVCNNGTLFPHQKKCLHMKVGDIASFNVT
VSIPNCERSRRIIIKPVGLGDTLEILISPECHCDCQKEVEVNSSKCHNGNGSFQCGVCAC
NPGHMGPHCECGEDILSTDSCKEAPDHPSCSGRGDCYCGQCICHLSPYGNIYGPYCQCDN
FSCVRHKGLLCGDNGDCDCGECVCRTGWTGEYCNCTTSTDSCVSEDGVLCSGRGDCVCGK
CVCTNPGASGPTCERCPTCSDPCNSKRSCIECHLSADSKAQEDCVDKCKLAGATISEEED
FSKDSSVSCSLQGENECLITFLITTDNEGKTIIHSINEKDCPKPPNIPMIMLGVSLAILL
IGVVLLCIWKLLVSFHDRKEVAKFEAERSKAKWQTGTNPLYRGSTSTFKNVTYKHREKQK
VDLTTEG
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atggggattgagctgctctgcctgttctttctatttctaggaaggaatgatcgtgcacaa
ggtggctgtgccttgggaggtgcagaaacctgtggagactgcttactcattggacctcag
tgtgcctggtgttcccaggagaattttacccatccatctggagttggtgaaagatgtgat
accccagcaaatcttttagccaaaggatgtcaattaaccttcatcgaaaaccctgtctcc
caaatagaaatccttaaaaataagcctctcagtgtaggcagacagaaaaatagttctgac
attgttcagattgcacctcaaaacttgattcttaaattgagaccaggtggtgaacagaca
ttgcaagtgcaagtccgccagaccgaggattaccctgtggacctgtattacctcatggat
ctctccgcctccatggacgatgacctcaacacaatcaaagagctgggctccctgctttcc
aaggagatgtctaaattaaccagcaactttagactgggcttcggctcttttgtggaaaaa
cccgtctccccttttatgaaaacaacgccagaggaaattgccaacccttgcagtagtata
ccctacttctgcctacctacatttggattcaagcacattttgccactgacaaatgacgct
gaaagattcaatgaaattgtgaagaatcagaaaatttctgctaatatcgacacacccgaa
ggtggatttgatgcaattatgcaagcagctgtgtgtaaggaaaagatcggctggcggaat
gactccctccatcttctggtctttgtgagtgatgccgattcgcactttggaatggacagc
aaactggcaggcatcgtcattcccaacgacgggctctgtcacctggacaacaagaatgaa
tactccatgtcaactgtcttggaatatccaacaattggacaactcattgataaactggtg
caaaacaacatgctattgatctttgctgtaacacaagaacaagttcatttatatgagaat
tacgcaaaacttattcctggagccacagtgggactgcttcagaaggactctggaaacatt
ctccagctcattatctcagcttatgaagaactgcggtctgaggtggaactggaggtatta
ggagacaccgaaggactcaacctgtccttcacagctgtctgtaacaatggcaccctcttc
ccacaccaaaagaaatgcttgcacatgaaggtgggagacatagcttcattcaacgtgact
gtgagcatacccaactgtgagagaagcaggcgcattatcataaagcctgtggggctgggg
gacaccctggaaatactcatcagtccagagtgccactgtgactgtcagaaagaagtggaa
gtgaacagctccaaatgccacaatggaaacggctccttccagtgtggggtgtgtgcctgc
aaccctggccacatgggccctcactgcgagtgtggcgaggacatcctgagcacagattcc
tgcaaggaggcccccgatcacccctcatgcagtggaaggggcgactgctactgtgggcag
tgcatctgccacctgtctccctatggaaacatttatgggccttactgccagtgtgacaat
ttctcctgcgtgagacataaagggctgctctgtggagataacggagactgtgactgtggc
gagtgtgtgtgcaggaccggctggactggcgaatactgtaactgcacaaccagcacggac
tcgtgtgtctctgaagacggagtgctgtgcagcgggcgtggggactgcgtttgcggcaag
tgtgtttgcacaaaccccggagcctcgggtcccacctgtgaacgatgtcctacctgcagt
gacccctgtaactcaaagcggagctgcatcgagtgccacctgtctgcagattccaaggcc
caagaagattgtgtggacaaatgcaaactagcgggcgcaactatcagtgaggaggaagat
ttctcaaaggatagttctgtttcctgctctctgcaaggagaaaatgaatgtcttattaca
ttcctaataactacagataacgaggggaaaaccatcattcacagcatcaacgaaaaagac
tgtccaaaacctccgaacattcctatgatcatgttgggggtttcactggctattcttctc
atcggagttgtcctcctgtgcatctggaagctgctggtgtcatttcatgatcgcaaagaa
gttgccaaatttgaagcagaacgatcaaaggccaagtggcaaacgggaacaaatccactg
tacagaggctccactagtacttttaaaaatgtgacctataaacacagggaaaaacaaaaa
gtggatctcaccacagaaggctag
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