Spermophilus citellus (European ground squirrel): 308631442
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Entry
308631442 CDS
T11988
Symbol
DSG1
Name
(RefSeq) desmoglein-1
KO
K07596
desmoglein 1
Organism
scil Spermophilus citellus (European ground squirrel)
Pathway
scil04382
Cornified envelope formation
scil04519
Cadherin signaling
scil05150
Staphylococcus aureus infection
Brite
KEGG Orthology (KO) [BR:
scil00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
308631442 (DSG1)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
308631442 (DSG1)
09160 Human Diseases
09171 Infectious disease: bacterial
05150 Staphylococcus aureus infection
308631442 (DSG1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
scil04515
]
308631442 (DSG1)
Cell adhesion molecules [BR:
scil04515
]
Cadherins
Major cadherins
308631442 (DSG1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_FAT4_N
Ig_CLSTN
Motif
Other DBs
NCBI-GeneID:
308631442
NCBI-ProteinID:
XP_081118788
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All DBs
Position
12:<90328589..>90361060
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AA seq
1098 aa
AA seq
DB search
MDWNSFRAAAVLFIFLVVVEVNSEFRIQVRDYNTKNGTIKWNSIRRQKREWIKFAAACRE
GEDNSKRNPIAKIHSDCAANQQVTYRISGVGIDQPPYGIFIINQKTGEINITSIVDREVT
PYFIIYCRALNSMGQDLERPLELRVRVLDINDNPPVFSMSTFVGQIEENSNANTLVMRLN
ATDADEPNNLNSKIAFKIIRQEPSDSPMFIINRYTGEIRTMNNFLDREQYGQYSLAVRGS
DRDGGADGMSAECECNIKILDVNDNIPYMEMSSNSVKIEENALHSDLLQIRVIDLDEEYT
ANWMAVIFFISGNEGNWFEIEMNERTNVGILKVVKPLDYEEIKNLQLSIGVRNKAEFHHS
IMSQYKLTATAISVVVLNVVEGSVFRPGSKTFAVTSNMGANHKVGEFIATDLDTGSASTT
VRYVMGNNPADLLVVDSKTGIITLRNRVTKDQYDRLGGKYQGTILSIDDSLQRTCTGTVI
IDLQGSGWATSNESGGTSGGSSSGSDGGTSTSGDTGSNTETSTGTDNNQGREDTSTNTNE
NGSTDSGTPNTQGNDNGQPTENFPNENSGVREIPSDNVHFGPAGIGLLIMGFLVLGLVPF
LLICCECGGAPGGGAGFEPVPECSDGAIHSWAVEGPQPEPQDMTTVCVPTIPPTNVNMIE
CIDNSGVYTNEYCGREMQDLGGGERTTGFELMDGVKTSAAPEICQEYSGTLRRNSMRECR
EGGLNMNFMENYFCQKAYAYADEDEGRPSNDCLLIYDIEGVGSPAGSVGCCSFIGEDLDE
SFLDTLGPKFKKLADISLGREIDSYPDPEPSWQPQSTEPPCPQQTTEPMAGGHPPVSPHF
GTTTVISESTYPSGPGVQHPMPIPDPLGYGNVTMTESYTTSGTLKPSVHLHDNRHASNVV
VTERVVGPISGADLHGMLDMPDLRDGSNVIVTERVIAPGSSLPTSLTISNPRESSNVVVT
ERVIQPTSGMMGSLSMHPDLSNAHNVIVTERVVSGAGISGISGTAGISGGGGIGSSGLVS
TSMGAGSMGLSGAGVSGSGIGLSNLGGGGGLSSSMGGTATIGHVRSSSDHHFSQTLGSAS
PSTSRSRITKYSTVQYTK
NT seq
3297 nt
NT seq
+upstream
nt +downstream
nt
atggactggaattccttccgagcagctgcagtactattcattttcctggtggtggtggaa
gttaacagtgaatttcgaatccaggttagagattataatacaaaaaatggcaccatcaag
tggaattcgatcagaaggcaaaaacgtgaatggatcaagtttgctgctgcctgccgtgaa
ggtgaagacaactccaagagaaacccaattgccaagattcattcagattgtgctgccaac
cagcaagttacataccgcatctctggagtaggaattgatcaaccaccttatggaatcttc
attattaaccaaaaaactggtgaaattaatataacatccatagtcgatcgagaggtcact
ccttatttcattatctattgccgagctctcaattcaatgggccaagatttggagagacct
ctggagcttagagtcagggttttggatataaatgacaatcctccagtgttttccatgtct
acatttgtaggacaaatagaagaaaattctaatgcaaatacactggtgatgagactcaat
gctactgatgcagatgaaccaaacaatttgaactcaaaaatagccttcaagatcataaga
caggaaccttctgattcaccaatgtttatcatcaacagatacactggagaaattcgaaca
atgaacaattttctagacagagagcaatatggccagtattctcttgctgtgagaggctca
gacagagatggtggggcagacggcatgtcagcagagtgtgaatgcaatattaaaatcctg
gatgtcaatgataacattccatatatggagatgtcttcgaactctgtaaagattgaagaa
aatgctctacattcagacctactccagattagagtaattgatttggatgaagaatacaca
gctaactggatggcagtaattttttttatctctggaaatgaaggaaattggtttgaaata
gaaatgaatgaaagaaccaatgtaggaattctaaaggtggtcaagcccttagattacgaa
gaaataaagaatctgcaacttagcattggagttagaaataaagctgaatttcatcattca
attatgtctcaatataaactcacagcaactgcaatctctgtggttgtgttaaatgtagtg
gaaggctcagtgttccgccctggttcaaagacatttgcagttacaagtaatatgggagca
aatcataaagtaggagagttcatagctactgacctggacacaggttcagcttcaacaact
gttagatatgtaatgggaaataatccagcagacctgctagttgttgactcaaaaacaggc
atcatcactttaagaaacagagttaccaaggatcaatatgacagacttgggggaaaatac
caaggaacaattctatctatagatgattctcttcaaagaacttgcactggcacagtcatt
attgaccttcaaggttctggctgggcaactagtaatgaaagtggtggtaccagcggtgga
agtagcagtggtagtgacggtggtaccagcaccagtggcgatacaggttccaatactgaa
accagtaccggtaccgataacaaccaaggaagagaagacaccagtaccaacacaaatgag
aatggttccactgattccggtactcccaacacacaaggaaatgacaatggacaaccgact
gagaattttcctaatgagaattcaggtgttcgagaaattccctcagataatgtacatttt
ggtcctgcgggtattggactactcatcatgggattcttagtactgggattggtcccattt
ttgttgatctgttgtgaatgtggaggagcccctggtggtggagctggctttgaacctgtt
cctgaatgttctgatggagcaattcactcatgggcagtagaaggaccacagcctgaaccc
caggatatgaccacagtctgtgtaccaacaataccacctactaatgtaaatatgatagaa
tgcattgacaactcaggagtctatacaaatgagtattgtggcagagaaatgcaggatctg
ggaggaggagaaagaacaacaggatttgaactaatggatggagttaagacatcagcggca
cctgagatatgtcaagaatattctggaacgttaagaagaaattctatgagggaatgtaga
gaaggcggtttgaatatgaatttcatggaaaattacttttgtcagaaggcatatgcttac
gcagatgaagatgaaggacgcccgtccaatgactgcttgctcatatatgacattgaaggg
gtaggttcgcctgccggctccgtgggctgttgcagtttcattggagaagacctggatgaa
agcttcttggatactctgggacctaaatttaagaaattggcagatatcagcctgggaaga
gaaatcgactcttatccagaccctgaaccttcctggcaacctcagagcactgaaccacct
tgccctcagcagacaacagagcccatggcaggtggacacccaccagtctccccgcacttt
ggcactactaccgtaatttctgagagcacctatccctcaggacctggtgtacagcatcct
atgcctattcctgatcctctgggctatggtaatgtcactatgacagagtcttataccacc
tctggcactctgaagccctctgtccatcttcatgataaccggcatgcatcaaacgtggtg
gtgacagagagggtggtgggcccaatctctggcgctgatttgcatggaatgctagatatg
cccgacttgagagatggctcgaatgtgatagtgacagaaagggtcatagcaccaggttca
agtctacccacctctctgaccatctctaatcctagagagtcttcaaatgtggtagtgaca
gaaagagtaatccaaccaacttctggcatgatgggcagtctgagtatgcatcctgactta
tcaaatgcccacaatgtgattgtgacagagagggttgtttctggtgctggcataagtgga
attagtggcacagctgggataagtggaggtgggggcataggtagcagtggcctggttagc
accagcatgggtgccggtagcatgggcctgagtggagctggagtcagtggtagtggcatt
gggctgagcaacctgggtggaggagggggcttgagtagtagtatgggggggacagccact
attggtcatgtgaggagttcctctgaccatcactttagccagacccttggatctgcctcc
cctagcacatctcgaagtcgaatcacaaagtacagtacagtacaatataccaagtaa
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