Spermophilus citellus (European ground squirrel): 308632263
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Entry
308632263 CDS
T11988
Symbol
BMAL1
Name
(RefSeq) basic helix-loop-helix ARNT-like protein 1 isoform 1
KO
K02296
aryl hydrocarbon receptor nuclear translocator-like protein 1
Organism
scil Spermophilus citellus (European ground squirrel)
Pathway
scil04710
Circadian rhythm
scil04728
Dopaminergic synapse
Brite
KEGG Orthology (KO) [BR:
scil00001
]
09150 Organismal Systems
09156 Nervous system
04728 Dopaminergic synapse
308632263 (BMAL1)
09159 Environmental adaptation
04710 Circadian rhythm
308632263 (BMAL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
scil03000
]
308632263 (BMAL1)
Transcription factors [BR:
scil03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
308632263 (BMAL1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAS_11
PAS
PAS_3
HLH
PAS_9
Per3-like_PAS-A
PAS_4
bHLH_IRO3
bHLH_INO2
PAS_2
bHLH_NCOA
bHLH_NPAS4
PAS_8
Motif
Other DBs
NCBI-GeneID:
308632263
NCBI-ProteinID:
XP_081120324
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All DBs
Position
2:<206943022..207043982
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AA seq
638 aa
AA seq
DB search
MADQRMDISSTISDFMSPGPTDLLSSSLGTSGVDCNRKRKGSSTDYQLDDFSFEESMDTD
KDDPHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLT
VLRMAVQHMKTLRGATNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVS
ESVFKILNYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDIT
PGPSRLCSGARRSFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYLKSWPP
TKMGLDEDNEPDNEGCNLSCLVAIGRLHSHVVPQPVNGEIRVKSMEYVSRHAIDGKFVFV
DQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTRDKITTNCYKFKIKDGSF
ITLRSRWFSFMNPWTKEVEYIVSTNTVVLANVLEGGDPTFPQLTTSPHSMDSMLPSGEDS
FVVGGPKRTHPTVPGIPGGTRAGAGKIGRMIAEEIMEIHRIRGSSPSSCGSSPLNITSTP
PPDASSPGGKKILNGGTPDIPSSGLLPGQAQENPGYPYSDSSSILGENPHIGIDMIDNDQ
GSSSPSNDEAAMAVIMSLLEADAGLGGPVDFSDLPWPL
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atggcggaccagagaatggacatttcctcgacaatcagtgacttcatgtccccaggcccc
accgacctgctctccagctcccttggcaccagtggtgtggattgcaaccgcaagcggaaa
ggcagctccactgactaccaacttgatgacttttcttttgaagaaagcatggacacagac
aaagatgaccctcatggaaggttagaatatacagaacatcagggaaggatcaagaatgca
agggaagctcacagtcagattgaaaagaggcgtcgggataaaatgaacagttttattgat
gaattggcttctttggtaccaacatgtaatgcgatgtccaggaaattagataaactgacc
gtgctaaggatggccgttcagcacatgaaaacattaagaggtgccaccaatccatataca
gaagcaaactataaaccaacttttctatcagatgatgaattgaaacacctcattctcagg
gcagcagatggatttttgtttgtcgtaggatgtgaccgagggaagatactctttgtctca
gagtctgtcttcaagatcctcaactatagccagaacgatctgattggtcagagtttgttt
gactacctgcaccctaaagatatcgccaaagtcaaggagcagctctcctcctctgacaca
gcaccccgggagcggctcatagatgcaaaaactggacttccagttaaaacagatataacc
cctgggccgtctcgattatgttctggagcacgacgttctttcttctgtaggatgaagtgt
aacaggccttcagtgaaggtcgaagacaaggactttccctccacctgttcaaagaaaaaa
gcagatcgaaaaagcttctgtacaatccacagcacaggctatttgaaaagctggccaccc
acaaaaatggggttggatgaagacaatgaaccagacaacgagggctgtaacctcagctgc
cttgtcgcaattggacgactgcattctcatgtggttccccaaccagtgaacggggaaatc
agggtgaaatccatggagtacgtttctcggcatgcaatagatgggaaatttgtctttgta
gaccagagggcaacagctattctggcatatttaccacaagaactcctaggcacatcatgt
tatgaatattttcatcaagatgacataggacatcttgcagaatgtcataggcaagtttta
cagacgagagacaagattacaactaattgctataagtttaaaatcaaagatggttctttc
atcacactacgaagtcgatggttcagtttcatgaacccctggaccaaggaagtagaatac
atcgtctcaaccaacactgttgttttagccaacgtcctggaaggcggggatccaaccttc
ccgcagctcacaacgtcccctcacagcatggacagcatgctgccctctggagaagattcc
tttgttgtaggtggcccaaagaggactcatcctactgttccagggattccagggggaacc
agggctggggcaggaaaaataggtcgaatgattgctgaggaaatcatggaaatccacagg
ataagagggtcatcgccttccagctgtggctccagcccattgaacattacaagtacgcct
ccccctgatgcctcctctccaggaggcaagaagattttaaacggagggactccagacatt
ccttccagtggcctactgccagggcaggctcaagagaacccaggttatccatattctgat
agttcttctattcttggtgaaaacccccacataggcatagacatgatagacaacgaccaa
ggatcaagtagtcccagtaatgatgaagcagcaatggctgtcatcatgagcctgctggaa
gcagatgctgggctgggcggccctgttgactttagcgacttgccatggccgctgtaa
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