KEGG   Spermophilus citellus (European ground squirrel): 308632609
Entry
308632609         CDS       T11988                                 
Symbol
LOC308632609
Name
(RefSeq) leucine-rich repeat protein SHOC-2-like isoform 1
  KO
K19613  leucine-rich repeat protein SHOC2
Organism
scil  Spermophilus citellus (European ground squirrel)
Pathway
scil04014  Ras signaling pathway
scil04519  Cadherin signaling
Brite
KEGG Orthology (KO) [BR:scil00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04014 Ras signaling pathway
    308632609 (LOC308632609)
  09133 Signaling molecules and interaction
   04519 Cadherin signaling
    308632609 (LOC308632609)
SSDB
Motif
Pfam: LRR_8 LRR_14 LRR_4 LRR_LRWD1 LRR_NLRC4
Other DBs
NCBI-GeneID: 308632609
NCBI-ProteinID: XP_081120981
LinkDB
Position
13:complement(<83589..>108184)
AA seq 582 aa
MSGNLGKEKNSKEKDLNVPSVKEREKTSKASGDSGTESHEKEPKTKGKDAKDGKGVSSAA
QPGVAFLVDNTIKRPSPALGTGKKSSNAEVTKELNKCLEENAVRLDLSKRSMHMLPSSIQ
HLTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLPDSLDNMKKLQLLDLRHNK
LKEIPLVVYRLDSLTTLYLRFNRITTVEKDIKNLSKLRTLSIRENKIKQLPAEIGELCNL
IMLDVAHNQLEHLPKEIGNCIQITNLDLQHNELLDLPDTIGNLSHLYRLGLRYNRLSAIP
RSLANCSALEDLNLENNNISALPESLLCSLVKLNSLNLARNYFQSYPVGGPAQFFTICSL
NMEHNQINKIPYGIFSRAKALRKLNMKDNQLTLLPLDFGTWTIMIELNLANNQLRMIPED
LSGLVSLQVLILSNNLLKKLPQGLGNLKKLRELDIEENKLESLPNEIGYLQDLQNLVLTN
NQLTILPKSIGYLTSLTHLSLGDNLLNHLPKEIGTLENLEELYLNDNPNLHSLPFELALC
SKLTIMSIENCPLSHLPPQIVARGPSFIIQFLKMRGTYNAVV
NT seq 1749 nt   +upstreamnt  +downstreamnt
atgagtggtaatttagggaaagaaaaaaactctaaagagaaagatctgaatgtgccatca
gtcaaagaaagagaaaagacgtcaaaggcctctggagattcggggacagaaagccatgaa
aaagaacctaaaaccaaagggaaagatgccaaagatggaaaaggggtctccagtgctgcc
caaccaggggtggcttttttagttgacaatacgatcaagcggccaagtcctgcacttggg
actgggaaaaaatccagtaatgcagaagtaactaaagagctcaacaaatgcctggaagag
aatgcagtgcgtttggacttatccaagaggtctatgcacatgttgccatcatcaatccaa
cacttgactcaattaaccgaactgtatttatacagtaacaaactgcagtccctcccagca
gaggtgggctgtctagtaaatctcatgacactggctctaagtgaaaattcacttaccagt
ttgcctgactctcttgataacatgaagaagctgcagttgcttgatttacggcataataaa
ctgaaagaaattcctttagtggtgtataggttagattctctcaccactctctaccttcgc
tttaatcgcataactactgtggaaaaggacataaaaaacctgtcaaaactcagaacgctt
agcattcgggagaacaaaatcaaacaactacctgctgaaattggtgaattatgtaacctc
attatgctggatgtagctcataatcaacttgaacaccttccaaaggagattggaaactgc
atacaaataaccaaccttgacttgcagcacaatgaactgctagacctcccagatactata
ggcaacctgtctcatttatatcgtcttggtctgagatacaatagactgtcagcaataccc
agatcactagcaaactgcagtgcacttgaagacttaaatttggagaacaataacatttct
gctttaccagagagccttctatgcagtcttgtgaaactgaacagtttgaacttggctaga
aattacttccagtcatatccagtgggtggtccagctcagtttttcaccatctgttccctc
aacatggaacacaatcaaatcaataaaatcccatatggaattttctctagagcaaaagca
ttaagaaaactaaatatgaaggacaatcagttaacattacttccattggactttggaact
tggaccatcatgatagaattgaatttagccaataatcagttaagaatgatccctgaggat
ttatctggtcttgtttctcttcaggttctaatattatcaaacaatcttctaaagaagctt
ccccaaggtcttggaaaccttaagaagttaagagagttggatatagaggagaacaaatta
gaatccttgccaaatgaaattggttatcttcaagatttacagaatttagtcttgacaaac
aaccaattgaccattcttcccaaaagcattggttaccttaccagtctcacacatctaagc
cttggagataacctgcttaatcatcttcctaaggaaattggtacactggaaaaccttgaa
gaactgtatttgaatgacaaccctaacctacatagccttccttttgagctggctctctgc
agcaagcttacaatcatgagtattgagaactgtccactcagtcaccttccacctcagatt
gttgctaggggaccttctttcatcattcagttcttaaaaatgcggggtacatataatgcc
gtggtctga

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