Spermophilus citellus (European ground squirrel): 308632620
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Entry
308632620 CDS
T11988
Symbol
SIX3
Name
(RefSeq) homeobox protein SIX3 isoform 2
KO
K19473
homeobox protein SIX3/6
Organism
scil Spermophilus citellus (European ground squirrel)
Brite
KEGG Orthology (KO) [BR:
scil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
scil03000
]
308632620 (SIX3)
Transcription factors [BR:
scil03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain SINE
308632620 (SIX3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SIX1_SD
Homeodomain
Homeobox_KN
HTH_3
Motif
Other DBs
NCBI-GeneID:
308632620
NCBI-ProteinID:
XP_081120990
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Position
13:complement(<79851638..>79854876)
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AA seq
355 aa
AA seq
DB search
MVFRSPLDLYSSHFLLPNFADSHHCSLLLASSGGGNGAGGGGGEGGGGGGGGGNRAGGGG
AGGAGGGGGGGGGSRAPPEELSMFQLPTLNFSPEQVASVCETLEETGDIERLGRFLWSLP
VAPGACEAINKHESILRARAVVAFHTGNFRDLYHILENHKFTKESHGKLQAMWLEAHYQE
AEKLRGRPLGPVDKYRVRKKFPLPRTIWDGEQKTHCFKERTRSLLREWYLQDPYPNPSKK
RELAQATGLTPTQVGNWFKNRRQRDRAAAAKNRLQHQAIGPSGMRSLAEPGCPTHGSAES
PSTAASPTTSVSSLTERADTGTSILSDKHGFSFWFPRTRHPTCMTIYLYLGKYSL
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atggtattccgctcccccctagacctctattcctcccacttcttgttgccaaacttcgcg
gattctcaccactgctccctacttctggcgagtagcggcggcgggaacggtgcgggaggc
ggcggcggcgagggaggcggcggcggcggcggcggcgggaaccgtgcgggaggcggcggt
gctggcggagcaggcggcggcggcggcggcggcggcggctccagggcccccccggaagag
ttgtccatgttccagctgcccaccctcaacttctcgccggagcaggtggccagcgtctgc
gagacgctggaggagacgggcgacattgagcggctgggccgcttcctctggtcgctgcct
gtggcccccggggcgtgcgaggccatcaacaaacacgagtcgatcctgcgcgcgcgcgcc
gtggtcgccttccacacgggcaacttccgcgacctgtaccacatcctggagaaccacaag
ttcaccaaggagtctcacggcaagctgcaggccatgtggctcgaggctcactaccaggag
gccgagaagctgcgcggccgcccactcggcccggtggacaagtaccgcgtgcgcaagaag
ttcccgctgccgcgcaccatctgggacggcgagcagaagacgcattgcttcaaggagcgg
actcggagcctgctgcgggagtggtacctgcaggacccctaccccaaccccagcaagaaa
cgcgaactggcgcaggccaccggcctcactcccacacaagtaggcaactggtttaagaac
cggcggcagcgcgaccgcgccgcagcggccaagaacaggctccagcaccaggccatcgga
cccagcggcatgcgctcgctggccgaacccggctgccccacgcacggctcggcagagtcg
ccgtccacggcggccagccccaccaccagtgtgtccagcctgacggagcgcgcggacacc
ggcacctccatcctctcggacaagcacggcttctccttttggttcccacggacccggcac
cccacctgcatgacgatttatttgtatctgggaaaatattctctctag
DBGET
integrated database retrieval system
