Spermophilus citellus (European ground squirrel): 308632680
Help
Entry
308632680 CDS
T11988
Symbol
OTX1
Name
(RefSeq) homeobox protein OTX1
KO
K09326
homeobox protein OTX1
Organism
scil Spermophilus citellus (European ground squirrel)
Pathway
scil04550
Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:
scil00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
308632680 (OTX1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
scil03000
]
308632680 (OTX1)
Transcription factors [BR:
scil03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
308632680 (OTX1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TF_Otx
Homeodomain
Homeobox_KN
SatD
Motif
Other DBs
NCBI-GeneID:
308632680
NCBI-ProteinID:
XP_081121086
LinkDB
All DBs
Position
13:complement(<63751720..>63755016)
Genome browser
AA seq
355 aa
AA seq
DB search
MMSYLKQPPYGMNGLGLAGPAMDLLHPSVGYPATPRKQRRERTTFTRSQLDVLEALFAKT
RYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQQQSGSGTKSRPVKKKSSPVRESSG
SESSGQFTPPAVSSSASSSSSASSASANPAAAAAAGIGGNPAVAAASSLSTPAASSIWSP
ASISPGSAPASVSVPEPLAAPSNASCMQRSVAAGAATAAASYPMSYGQGGSYGQGYPAPS
SSYFGGVDCSSYLAPMHSHHHPHQLSPMAPSSMAGHHHHHPHAHHPLSQSSGHHHHHHHH
HHQGYGGSGLAFNSADCLDYKEPGATAASSAWKLNFNSPDCLDYKDQASWRFQVL
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcttacctcaaacaacccccatatggcatgaatgggctgggcctggccgggccg
gccatggaccttctgcacccctctgtgggctatccggccaccccgcggaagcagcggcgg
gagcgcaccaccttcacgcgctcacagctggacgtgcttgaggcgctgttcgccaagact
cgctaccctgacatcttcatgcgcgaggaggtggcgctcaaaatcaacctgccagagtcc
agagtccaggtctggttcaagaaccgccgcgccaagtgccgccagcagcagcagagcggg
agcggaaccaagagccgcccagtcaaaaagaagtcgtctccggtgcgggaaagctccggg
tccgaaagcagcggccaattcacgccaccggctgtgtccagctcggcctcgtcctctagc
tcggcctccagcgcctccgctaaccccgcggctgctgcggctgcgggcataggtggcaac
ccggcggtggcagccgcgtcgtcgctcagcacgcccgctgcctcttccatctggagcccg
gcttccatctcacccggctcagcaccggcttctgtatcagtacccgaaccgctggccgct
ccaagcaacgcctcatgtatgcagcgctcagtagccgcaggtgccgccacggcagcagcg
tcctaccccatgtcctatggccagggcggcagctatggtcagggctatcccgcgccctcc
tcttcctactttggcggcgtggactgcagctcatacctagcacccatgcactcacatcac
cacccgcaccagctcagccccatggcaccctcctccatggctggccaccatcaccaccac
ccgcacgcgcaccacccgttgagccagtcctcaggtcaccatcaccaccaccaccaccac
caccaccaaggctacggtggctcggggcttgccttcaactctgccgactgcttggattac
aaggagcctggcgccaccgctgcttcctccgcctggaaactcaacttcaattctcccgac
tgtctggactataaagaccaagcctcatggcgattccaggtcttgtga
DBGET
integrated database retrieval system
