KEGG   Spermophilus citellus (European ground squirrel): 308633863
Entry
308633863         CDS       T11988                                 
Symbol
BTRC
Name
(RefSeq) F-box/WD repeat-containing protein 1A isoform 1
  KO
K03362  F-box and WD-40 domain protein 1/11
Organism
scil  Spermophilus citellus (European ground squirrel)
Pathway
scil04114  Oocyte meiosis
scil04120  Ubiquitin mediated proteolysis
scil04218  Cellular senescence
scil04310  Wnt signaling pathway
scil04340  Hedgehog signaling pathway
scil04390  Hippo signaling pathway
scil04710  Circadian rhythm
scil05170  Human immunodeficiency virus 1 infection
Brite
KEGG Orthology (KO) [BR:scil00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    308633863 (BTRC)
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    308633863 (BTRC)
   04340 Hedgehog signaling pathway
    308633863 (BTRC)
   04390 Hippo signaling pathway
    308633863 (BTRC)
 09140 Cellular Processes
  09143 Cell growth and death
   04114 Oocyte meiosis
    308633863 (BTRC)
   04218 Cellular senescence
    308633863 (BTRC)
 09150 Organismal Systems
  09159 Environmental adaptation
   04710 Circadian rhythm
    308633863 (BTRC)
 09160 Human Diseases
  09172 Infectious disease: viral
   05170 Human immunodeficiency virus 1 infection
    308633863 (BTRC)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:scil04121]
    308633863 (BTRC)
   03036 Chromosome and associated proteins [BR:scil03036]
    308633863 (BTRC)
Ubiquitin system [BR:scil04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Target recognizing subunit (F-box)
     308633863 (BTRC)
Chromosome and associated proteins [BR:scil03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Regulators of centriole replication
     308633863 (BTRC)
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_WDR3_1st Beta-prop_THOC3 Beta-prop_IFT122_1st WD40_WDHD1_1st WD40_Prp19 Beta-prop_WDR3_2nd WD40_CDC20-Fz Beta-prop_TEP1_C Beta-prop_TEP1_2nd DSE1_N EIF3I WD40_MABP1-WDR62_2nd WD40_Gbeta Beta-TrCP_D WDR55 Beta-prop_WDR36-Utp21_2nd Beta-prop_SCAP Beta-prop_WDR75_1st Beta-prop_EML Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 Beta-prop_WDR41 Beta-prop_WDR36-Utp21_1st Beta-prop_WDR90_POC16_2nd F-box-like Beta-prop_EIPR1 CFAP251_N Beta-prop_RIG_2nd Beta-prop_Aladin WDR90_beta-prop_4th ANAPC4_WD40 WD40_MABP1-WDR62_1st PAC11 ASA1 Beta-prop_SPT8 Beta-prop_DCAF12 NBCH_WD40 Beta-prop_IP5PC_F TRM82_WD Beta-prop_DCAF4 F-box Beta-prop_IFT140_1st Beta-prop_VPS8 WD40_like Beta-prop_NOL10_N Beta-prop_WDR19_1st Beta-prop_HPS5 WD40_RFWD3 Beta-prop_Nup120_160 Beta-prop_WDR11_2nd F-box_5 WD40_2 Aq_678 DUF4508 MTUS1_CCDC69_CC1
Other DBs
NCBI-GeneID: 308633863
NCBI-ProteinID: XP_081123198
LinkDB
Position
15:70857290..71051629
AA seq 605 aa
MDPAEAVLQEKALKFMCSMPRSLWLGCSSLADSMPSLRCLYNPGTGALTAFQNSSEREDC
NNGEPPRKIIPEKNSLRQTYNSCARLCLNQETVCLANTAMKTENCVAKTKLANGTSSMIV
PKQRKLSASYEKEKELCVKYFEQWSESDQVEFVEHLISQMCHYQHGHINSYLKPMLQRDF
ITALPARGLDHIAENILSYLDAKSLCAAELVCKEWYRVTSDGMLWKKLIERMVRTDSLWR
GLAERRGWGQYLFKNKPPDGNAPPNSFYRALYPKIIQDIETIESNWRCGRHSLQRIHCRS
ETSKGVYCLQYDDQKIVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQYDERVIITGS
SDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGLMVTCSKDRSIAVWDMASPTDITLRR
VLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYRDRLVV
SGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLVAALDPR
APAGTLCLRTLVEHSGRVFRLQFDEFQIVSSSHDDTILIWDFLNDPATQAEPPRSPSRTY
TYISR
NT seq 1818 nt   +upstreamnt  +downstreamnt
atggacccggccgaggcggtgctgcaggagaaagcgctcaagtttatgtgctctatgccc
aggtctctgtggctgggctgctccagcctggcggacagcatgccttcgctgcgatgcctg
tataacccagggactggcgcactcacagctttccagaattcctcagagagagaagactgt
aataatggtgaaccccctaggaagataataccagagaagaattcacttagacagacttat
aacagctgtgccagactctgcttaaaccaagaaacagtatgtctagcaaatactgctatg
aagactgaaaattgtgtggccaaaacaaaacttgccaatggcacttccagtatgatcgta
cccaagcaacggaaactctctgcaagctatgaaaaggaaaaggaactgtgcgtcaaatat
tttgagcagtggtcagagtccgatcaagttgaatttgtggaacatcttatatcccaaatg
tgtcattatcaacatgggcacataaattcatatcttaaacctatgctgcaaagggatttc
ataactgctctgccagctcggggattagatcatattgctgagaatattctgtcatacttg
gatgccaaatcactttgtgctgctgaacttgtatgcaaagaatggtaccgagtgacgtcg
gatggcatgttatggaagaagctcatcgagagaatggtcaggacagattctctgtggaga
ggcttggcagaacgaagagggtggggacagtatttattcaaaaacaaacctcctgatggg
aatgctcctcccaactctttttatagagcactttatcctaaaattatacaagacattgag
acaatagaatctaattggagatgtggaagacacagtttacagagaatccactgccggagt
gaaacgagcaaaggagtttactgtttacagtatgatgaccagaaaatagtaagcggcctt
cgagacaacacaatcaagatctgggataaaagcacattggaatgcaaacgaattctcaca
ggccacacaggttccgtcctttgtctccagtatgatgagagggtgatcataactggatcg
tcagattccacggtcagagtttgggatgtaaatacaggtgaaatgctaaacacattgatt
caccattgtgaagcagttctgcacttacgtttcaataatggcttgatggtgacctgttcc
aaagatcgttccattgctgtatgggatatggcctccccaactgatattaccctccggagg
gttttggttggacaccgagctgctgtcaatgttgtagactttgatgacaagtacatcgtt
tctgcatctggggacagaactataaaggtgtggaacacaagtacttgtgaatttgtaagg
accctaaatggacacaaacgagggattgcctgtttgcagtacagagacaggctggtggtg
agtggctcctctgacaacactatcagattatgggacattgaatgtggtgcatgtttacga
gtgttagaaggtcatgaggaattggtgcgttgtattcgatttgataacaagaggatagtc
agtggggcctatgatggaaaaattaaagtgtgggatcttgtggctgctttggacccccgt
gctcctgcagggactctctgtctacggacccttgtggagcattctggaagagttttccga
ctccaatttgatgaattccagattgtcagtagttcacacgatgacacaatcctcatctgg
gacttcctaaatgatccagcaacccaagctgagcccccccgctccccttctcgaacatac
acctacatctccagataa

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