KEGG   Spermophilus citellus (European ground squirrel): 308634143
Entry
308634143         CDS       T11988                                 
Symbol
SHOC2
Name
(RefSeq) leucine-rich repeat protein SHOC-2 isoform 1
  KO
K19613  leucine-rich repeat protein SHOC2
Organism
scil  Spermophilus citellus (European ground squirrel)
Pathway
scil04014  Ras signaling pathway
scil04519  Cadherin signaling
Brite
KEGG Orthology (KO) [BR:scil00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04014 Ras signaling pathway
    308634143 (SHOC2)
  09133 Signaling molecules and interaction
   04519 Cadherin signaling
    308634143 (SHOC2)
SSDB
Motif
Pfam: LRR_8 LRR_14 LRR_4 LRR_1 LRR_LRWD1 LRR_9 LRR_13 LRR_NLRC4
Other DBs
NCBI-GeneID: 308634143
NCBI-ProteinID: XP_081123873
LinkDB
Position
15:79156091..79247453
AA seq 582 aa
MSSSLGKEKDSKEKDPKVPSAKEREKEAKASGGFGKESKEKEPKTKGKDAKDGKKDSSAA
QPGVAFSVDNTIKRPNPAPGTRKKSSNAEVIKELNKCREENSMRLDLSKRSIHILPSSIK
ELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLPDSLDNLKKLRMLDLRHNK
LREIPSVVYRLDSLTTLYLRFNRITTVEKDIKNLSKLSMLSIRENKIKQLPAEIGELCNL
ITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGNLSSLNRLGLRYNRLSAIP
RSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSL
NMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPED
VSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTN
NQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELALC
SKLSIMSIENCPLSHLPPQIVAGGPSFIIQFLKMQGPYRAMV
NT seq 1749 nt   +upstreamnt  +downstreamnt
atgagtagtagtttaggaaaagaaaaagactctaaagagaaagatcccaaagtaccatca
gccaaggaaagagaaaaggaggcaaaggcctctggaggttttgggaaagaaagcaaagaa
aaagaacctaaaaccaaagggaaagatgccaaagatggaaaaaaggactccagtgctgcc
caaccaggggtggctttttcagttgacaatacgatcaaacggccaaatcctgcacctggg
actaggaaaaaatccagtaacgcagaagtgattaaagagctcaacaaatgccgggaagag
aattcaatgcgtttggacttatccaagagatctatacacatattgccatcatcaatcaaa
gagttgactcaattaacagaactttatttatacagtaacaaactgcagtccctcccagca
gaggtgggctgtttagtaaatctcatgacactggctctaagtgaaaattcacttaccagt
ttgcctgactctcttgataacttgaagaagctgcggatgcttgatttacggcataataaa
ctgagagaaattccttcagtggtgtataggctagattctctcaccactctctaccttcgc
tttaatcgtattactactgtggaaaaggacatcaaaaacctgtcaaaactcagcatgctt
agcatccgtgagaacaaaatcaaacaactacctgctgaaattggtgaattatgtaacctc
attacgctggatgtagctcacaatcaacttgaacatcttccaaaggagattggaaactgc
acacagataaccaaccttgacttgcagcacaatgaactgctagacctcccagatactata
ggaaacctatccagtttaaatcgtcttggtctgagatacaatagactgtcagcaataccc
agatcactagcaaaatgcagtgcgcttgaagaattaaatttagagaacaataacatttct
actttaccagagagtcttttatccagtcttgtgaaactgaatagcttgaccttagctaga
aattgcttccaattgtatccagtgggtggtccatctcagttttctaccatctattccctc
aacatggaacacaatcgaatcaataaaatcccatttggaattttctctagagcaaaagta
ttaagtaagctgaatatgaaggacaatcagttaacatcacttcctttggactttggaact
tggaccagcatggtagaattgaatttagccactaatcagcttacaaagatccctgaggat
gtatctggacttgtttctcttgaggttctaatattatcaaacaatcttctgaagaagctt
ccccatggtcttggaaaccttaggaagttaagagagttggatctagaggagaacaaatta
gaatctttgccaaatgaaattgcttatcttaaagatttacagaaattagtcttgacaaac
aaccagttgaccactcttcccagaggcattggtcaccttactaatctcacacatctaggc
cttggagagaacctacttactcatcttcctgaggaaattggtacactggaaaacctagaa
gaactgtatttgaatgacaaccctaaccttcatagccttccctttgagctggctctctgc
agcaaactttcaatcatgagtattgagaactgtccactcagtcaccttccacctcagatt
gttgctgggggaccttctttcatcattcagttcttaaaaatgcagggtccatatcgtgcc
atggtctga

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