KEGG   Spermophilus citellus (European ground squirrel): 308635699
Entry
308635699         CDS       T11988                                 
Symbol
TUBB4B
Name
(RefSeq) tubulin beta-4B chain
  KO
K07375  tubulin beta
Organism
scil  Spermophilus citellus (European ground squirrel)
Pathway
scil04145  Phagocytosis
scil04517  IgSF CAM signaling
scil04540  Gap junction
scil04814  Motor proteins
scil05010  Alzheimer disease
scil05012  Parkinson disease
scil05014  Amyotrophic lateral sclerosis
scil05016  Huntington disease
scil05020  Prion disease
scil05022  Pathways of neurodegeneration - multiple diseases
scil05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:scil00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    308635699 (TUBB4B)
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagocytosis
    308635699 (TUBB4B)
  09144 Cellular community - eukaryotes
   04540 Gap junction
    308635699 (TUBB4B)
  09142 Cell motility
   04814 Motor proteins
    308635699 (TUBB4B)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    308635699 (TUBB4B)
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    308635699 (TUBB4B)
   05012 Parkinson disease
    308635699 (TUBB4B)
   05014 Amyotrophic lateral sclerosis
    308635699 (TUBB4B)
   05016 Huntington disease
    308635699 (TUBB4B)
   05020 Prion disease
    308635699 (TUBB4B)
   05022 Pathways of neurodegeneration - multiple diseases
    308635699 (TUBB4B)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:scil03036]
    308635699 (TUBB4B)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:scil04812]
    308635699 (TUBB4B)
   04147 Exosome [BR:scil04147]
    308635699 (TUBB4B)
Chromosome and associated proteins [BR:scil03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     308635699 (TUBB4B)
Cytoskeleton proteins [BR:scil04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    308635699 (TUBB4B)
Exosome [BR:scil04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   308635699 (TUBB4B)
  Exosomal proteins of colorectal cancer cells
   308635699 (TUBB4B)
  Exosomal proteins of bladder cancer cells
   308635699 (TUBB4B)
SSDB
Motif
Pfam: Tubulin Tubulin_C Misat_Tub_SegII Tubulin_3 Tubulin_2
Other DBs
NCBI-GeneID: 308635699
NCBI-ProteinID: XP_081126446
LinkDB
Position
2:complement(760213..762777)
AA seq 445 aa
MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV
PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV
RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVV
EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL
RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM
AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG
LKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
EYQQYQDATAEEEGEFEEEAEEEVA
NT seq 1338 nt   +upstreamnt  +downstreamnt
atgagggagatcgtgcacctgcaagccgggcagtgcggcaaccagatcggcgccaagttc
tgggaggtgatcagcgacgagcatggcatcgatcctaccggcacgtaccacggggacagc
gatctgcagttggagcgcatcaatgtgtactacaacgaggccaccggtggcaagtacgtg
ccccgcgctgtgctcgtggacctggagcctggcaccatggactcggtgcgctcgggccct
tttgggcagatcttcaggccagacaacttcgttttcggtcagagtggtgctgggaacaac
tgggccaaggggcactacacagaaggcgccgagctggtggactctgtgctggatgttgtg
aggaaggaggcagagagctgtgactgcctgcagggtttccagcttacccactccctgggt
ggggggactggttctgggatgggtaccctcctcatcagcaagatccgggaggagtaccca
gacaggatcatgaacacattcagtgtggtgccctcccctaaagtgtcggacacagtggtt
gagccctacaatgccactctctcagtccaccagcttgtagaaaatacagatgaaacctat
tgcattgataatgaagccctctatgacatttgcttcagaaccctaaagctgaccacacct
acttatggtgaccttaaccacctggtgtctgccaccatgagtggggtcaccacctgcctg
cgctttccaggacagcttaatgctgaccttaggaagctggctgtgaacatggtgcccttt
ccccgcctgcactttttcatgcctggctttgcccccctgaccagcaggggcagccagcag
taccgtgccctgacggtgcctgagctcacccagcagatgtttgatgctaagaacatgatg
gccgcctgcgacccccgccatggccgctacctaacagtggctgctgtgttcaggggccgc
atgtccatgaaggaggtggatgaacagatgcttaatgtccagaacaagaacagcagctat
tttgtggaatggatccccaacaatgtgaaaacagctgtctgtgacattccgccccggggg
ctaaaaatgtctgccaccttcattggcaacagcaccgccatccaggagctgttcaagcgc
atctcggagcagttcactgccatgttccggcgcaaggccttcctgcactggtacacaggt
gagggcatggacgagatggagttcactgaagccgagagcaatatgaatgacctggtgtct
gagtaccaacagtaccaggacgccacggcggaggaggagggcgagtttgaggaggaggct
gaggaggaggtggcctag

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