KEGG   Spermophilus citellus (European ground squirrel): 308636074
Entry
308636074         CDS       T11988                                 
Symbol
ITGB4
Name
(RefSeq) integrin beta-4 isoform 1
  KO
K06525  integrin beta 4
Organism
scil  Spermophilus citellus (European ground squirrel)
Pathway
scil04151  PI3K-Akt signaling pathway
scil04382  Cornified envelope formation
scil04510  Focal adhesion
scil04512  ECM-receptor interaction
scil04518  Integrin signaling
scil04810  Regulation of actin cytoskeleton
scil04820  Cytoskeleton in muscle cells
scil05165  Human papillomavirus infection
scil05410  Hypertrophic cardiomyopathy
scil05412  Arrhythmogenic right ventricular cardiomyopathy
scil05414  Dilated cardiomyopathy
Brite
KEGG Orthology (KO) [BR:scil00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04151 PI3K-Akt signaling pathway
    308636074 (ITGB4)
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    308636074 (ITGB4)
   04518 Integrin signaling
    308636074 (ITGB4)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    308636074 (ITGB4)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    308636074 (ITGB4)
   04810 Regulation of actin cytoskeleton
    308636074 (ITGB4)
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    308636074 (ITGB4)
 09160 Human Diseases
  09172 Infectious disease: viral
   05165 Human papillomavirus infection
    308636074 (ITGB4)
  09166 Cardiovascular disease
   05410 Hypertrophic cardiomyopathy
    308636074 (ITGB4)
   05412 Arrhythmogenic right ventricular cardiomyopathy
    308636074 (ITGB4)
   05414 Dilated cardiomyopathy
    308636074 (ITGB4)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:scil04147]
    308636074 (ITGB4)
   04515 Cell adhesion molecules [BR:scil04515]
    308636074 (ITGB4)
   04090 CD molecules [BR:scil04090]
    308636074 (ITGB4)
Exosome [BR:scil04147]
 Exosomal proteins
  Exosomal proteins of colorectal cancer cells
   308636074 (ITGB4)
  Exosomal proteins of bladder cancer cells
   308636074 (ITGB4)
Cell adhesion molecules [BR:scil04515]
 Integrins
  Integrin beta subunits
   308636074 (ITGB4)
CD molecules [BR:scil04090]
 Proteins
  308636074 (ITGB4)
SSDB
Motif
Pfam: Integrin_beta fn3 Calx-beta Integrin_B_tail PSI_integrin Pur_ac_phosph_N I-EGF_1 EGF_Teneurin FN3_DSCAM-DSCAML_C EGF_integrin EGF_TEN EGF_2 vWA_SIBA-E EGF_DL_JAG
Other DBs
NCBI-GeneID: 308636074
NCBI-ProteinID: XP_081127281
LinkDB
Position
17:73224429..73257789
AA seq 1868 aa
MAGPHPNPWVRLLLAALLSVGFPGSTANLCKKAQVKSCTECIRVHPDCAYCTDEMFKERR
CNTQIELLAAGCRQESIVVMESSLEITEETQIDTTLRRSQVSPQRLQARLRPGEERHFAL
EVFEPLESPVDLYILMDFSNSMSDDLDNLKKMGQDLAQVLSQLTSDYTIGFGKFVDKVSV
PQTDMRPEKLKEPWPNSDPPFSFKNVISLTEDVNEFRSKLQGERISGNLDAPEGGFDAIL
QTAVCTGAIGWRPDSTHLLVFSTESAFHYEADGANVLAGIMSRNDEKCHLDATGTYTQYN
MQDYPSVPTLVRLLAKHNIIPIFAVTNYSYSYYEKLHTYFPVSSLGVLQQDSSNIVDLLE
EAFNRIRSNLDIRALDSPRGLRTEVTSKMYQKTKTGSFHIRRGEVGTYDVQLRAAEDVDG
THVCQLAEEDQRGNIHLKPSFSDGLWMDVGIICDVCTCELQKEVRSARCDYHGDFMCGHC
VCNEGWSGKTCNCSTGSLSDTEPCIREGEDKPCSGRGECQCGRCVCYGEGRYEGHFCEYD
NFQCPRTSGFLCNDRGRCSMGQCVCEPGWTGLSCDCPLSNATCIDSNGGICNGRGYCECG
RCHCNQQSLYTDTTCEINYSAIRLGLCEDLRSCVQCQAWGTGEKKGRTCEECSFKVKMVD
ELKKAEEVVEYCSFRDEDDDCTYSYTVEGDGSPGPNSTILVHRKKDCPPGSWWLIFLLIP
LLLLLALLLLLCWKYCACCKACLALLPCCNRGHMVGFKEDHYMLRENLMASDHLDTPMLR
SGNLKGRDTVRWKITNNVQRPGFATHAASTNPTELVPYGLSLRLGRLCTENLMKPGTREC
DQLRQEVEENLNEVYRQVPGAHKLQQTKFRQQPNAGKKQDHTIVDTVLMAPRSAKQTLLK
LTEKQVEQGSFHELKVAPGYYTLTAEQDARGMVEFQEGVELVDVRVPLFIRPEDDDEKQL
LVEAIDVPVGTATLGRRLVNITIIKEQASGVVSFEQSEYSVSRGEQVARIPVIRRILDNG
KSQVSYRTQDNTAQGNRDYIPVEGELLFHPGETWKELQVKLLELQEVDSLLRGRHSRRFH
VQLSNPKFGTRLGQPHSATIIIGDRDELDRSLINQTGSSPPPPRGDLGAPQNPNAKAAGS
RKIHFNWLPPPGKPMGYRVKYWIQGDSESEAHLLDSKVPSVELTNLYPYCDYEMKVCAYG
AQGEGPYSSPVSCRTHQEVPSEPGRLAFNVVSSTVTQLSWAEPAETNGEITAYEVCYGLV
NEDNRPIGPMKKVLVDSPKNRMLLIENLRESQPYRYTVKARNGAGWGPEREAIINLATQP
KRPMSIPIIPDIPIVDAQGGEDYESFLMYSDDVLRSPAGSQRPSVSDDTGGGWKFEPLLG
EELDLRHVTWRLPPELIPRLSASSGRSSDDGGAGSAAGEGSSRARSATPRPPGEHLVNGR
MDFAFPGSANSLHRMTAANATYGTHLSPHLPHRVLSTSSTLTRDYHSLTRTQHSQSSTLP
RDYSTLTSLSSQGLPPIWEDGRSRLPLSWALGSWSRAQMKGLPPSRGSRDSIILAGQPAA
PFWGPDSQGAMGVPDTPTRLVFSALGPTSLKVSWQEPQCERLLLGYSVEYQLLNGGELHR
LNIPNPGQTSVVVEDLLPNHSYVFRVRAQSQEGWGREREGVITIESQVHPQSPLCPLPGS
AFTLSTPSAPGPLVFTALSPDSLQLSWERPRRPNGDILGYLVTCEMAQGGGPATTFRVDG
DNPESRLTVPGLSENVPYKFKVQARTTEGFGPEREGIITIESQDGGPFPQLGTHSGLFQH
PLQGEYSSITTTHTSTTEPFLMDGLTLGSQHLETSGSLTRHVTQEFVSRTLTTSGTLNAQ
VDQQFFQT
NT seq 5607 nt   +upstreamnt  +downstreamnt
atggcagggccacatcccaatccgtgggtcaggctgctgctggcagctctactgagtgtc
ggctttcctgggagtacagccaacctctgcaagaaggctcaggtgaagagctgcacggag
tgcatccgtgtgcacccagactgcgcctactgcacggatgagatgttcaaggagcggcgc
tgcaacacccagatcgagctgctggccgcaggctgccggcaggaaagcatagtggtcatg
gagagcagcttggagatcacagaggagacccagatcgataccaccctccgccgcagccag
gtgtccccccagcgcctacaggcccgcctgcgacccggggaagagcggcactttgcactc
gaggtgtttgagcccctggagagccctgtggacctgtatatcctcatggacttctccaac
tccatgtccgacgacttggacaaccttaagaagatggggcaggacctggcccaggtcctg
agccagctcaccagtgactacactattggatttggcaagtttgtggacaaagtcagcgtc
cctcagacagacatgaggcctgagaagctgaaggaaccctggcccaacagtgaccctccg
ttctcctttaagaacgtcatcagcttgacggaggatgtgaacgaattccggagtaagctg
cagggagagaggatctcaggcaacctggacgctcctgaaggtggcttcgatgccatcctg
cagacggcggtgtgcacgggggccatcggctggcgccccgacagcacccatctgctggtg
ttctccactgagtcagccttccactatgaggccgatggtgccaacgtgctggctggcatc
atgagccgcaatgatgagaagtgccacctggatgccacgggcacctacacccagtacaat
atgcaggactacccttcagtgcccacgcttgtgcgcctgctcgccaagcacaacattatc
cccatcttcgctgttaccaactactcctacagctactatgagaagcttcatacatacttc
ccggtctcctcgctgggggtgctgcaacaggactcatccaacatcgtggacctgctagag
gaagccttcaatcgcattcgctccaaccttgacatccgggccctagacagcccacgaggg
cttcggacagaggtcacctccaagatgtaccagaagacaaagacagggtcctttcacatc
aggcggggagaagtgggaacttatgatgtgcaactgcgggccgcggaagacgtggatgga
acacacgtgtgccagctggcggaagaggaccagaggggaaacatccacctgaagccctcc
ttctccgacggcctctggatggacgtgggcatcatctgtgacgtgtgcacctgcgagctg
caaaaagaggtgcggtcagctcgctgcgactaccacggagacttcatgtgtggacactgt
gtgtgcaacgagggctggagcggcaagacctgcaactgctccactggctcgctgagtgac
actgagccctgcatccgcgagggtgaggacaagccatgctcaggccgcggggagtgccag
tgcgggcgttgcgtgtgctatggtgaaggccgctatgagggtcacttctgcgagtatgac
aacttccagtgtccccgcacctccgggttcctctgcaatgaccggggacgctgctccatg
ggccagtgtgtgtgtgagcctggttggacgggcctgagctgtgactgtcccctcagcaat
gccacctgcatcgacagcaatgggggcatctgtaatgggcgtggctactgcgagtgtggc
cgctgccactgcaaccagcagtcgctctacacggacaccacctgcgagatcaactactca
gcgatccgcctgggcctctgcgaggacctgcgctcctgtgtgcagtgccaggcctggggc
actggggagaagaaggggcgcacgtgcgaggagtgcagcttcaaggtcaagatggtggac
gagctcaagaaagctgaggaggtggtggagtactgctccttccgggacgaggacgacgac
tgcacctacagctacaccgtggagggcgacggctccccggggcccaacagcaccatcctg
gtgcacaggaagaaggactgccctcccggctcctggtggctcatcttcctgctcatcccc
ctcctgctgctgctggcactgctgctgctgctctgctggaagtactgtgcctgctgtaag
gcctgtctggcacttctcccttgctgcaaccgaggtcacatggtcggctttaaggaagac
cactacatgctgcgggagaacttgatggcctcagaccacctggacacacccatgctgcgc
agtgggaacctcaaggggcgggacacggtccgctggaagatcaccaacaacgtgcagcgc
cctggctttgccacccacgccgccagcaccaaccccacagagctcgtgccctatgggctg
tccctgcgccttggccgcctctgcaccgagaacctgatgaagcctggcactcgagagtgt
gaccagctgcgccaggaggtggaagagaatctcaacgaggtgtacagacaggtccctggt
gcacacaagctccagcagacaaagttccggcaacagcccaatgctgggaaaaagcaagac
cacaccattgtggacacggtgttgatggcgccccgctcggccaagcagaccctcctgaag
ctgacagagaagcaggtggagcaggggtccttccatgagctcaaggtggcccccggctac
tacaccctcactgcagagcaggacgccaggggcatggtggagttccaggagggcgtggag
ctggtggacgtgcgcgtgcccctcttcatccggcctgaagacgacgatgagaagcagctg
ctggtggaggccatcgatgtgcccgtgggcactgccacccttggccgccgcctggtaaac
atcaccatcatcaaggagcaagcaagtggcgtggtgtcctttgagcaatctgagtactca
gtgagccgtggggagcaggtggcccgcattcctgtcatccggcgaatcctggacaatggc
aagtctcaggtctcctaccgcacacaggacaacacagcacagggcaaccgggactacatt
cccgtggagggcgagctgctgttccaccctggagagacctggaaggagctgcaggtgaag
ctcctggagctgcaggaagtagattccctccttcggggccgtcacagccgccgcttccat
gtccaacttagcaaccccaagtttgggacccgcctgggccagccccactcagccaccatc
atcattggggaccgagatgaactggaccggagcctcataaatcagaccgggtcatcacca
ccacctccccgtggggacctgggagccccacagaaccccaatgccaaggctgctgggtcc
cggaagatccatttcaactggctgcctcctcctggcaagcccatggggtacagggtgaag
tactggatccagggtgactccgagtccgaagcccacctgcttgatagcaaggtgccctcg
gtggagctcaccaacctctacccatactgcgactatgagatgaaggtgtgtgcctacggg
gcacagggcgagggtccctacagctccccagtgtcctgccgcacccaccaagaagtaccc
agtgagcctgggcgtctggccttcaatgtcgtctcctctacggtgacacagctgagctgg
gctgagccagctgagaccaatggcgagatcacagcctatgaagtctgctatggcctggtc
aatgaggacaaccgacccattgggcccatgaagaaggtgctggtggacagccccaagaac
aggatgctgctcatcgagaacctacgagaatcccagccatatcgctacaccgtgaaggca
cgcaatggggcaggctggggacctgagcgggaggccatcatcaacctggccactcagccc
aagaggcccatgtccatccccatcatcccagacatccccattgtggacgcccagggtggg
gaagactatgaaagcttccttatgtacagtgatgacgttctgcgctccccagcaggcagt
cagaggcccagcgtctctgatgacactggcggcggctggaagttcgagcccctgctgggg
gaggagctggacctacggcacgtcacgtggcggctgcccccggagctcatcccgcgcctg
tcggccagcagcgggcgctcttctgacgacggcggcgcggggagcgcggccggggagggc
agcagccgggcccgcagcgcgacgccccggccccctggagagcacctggtgaatggtcga
atggactttgccttcccaggcagtgccaactccctacacaggatgacagcggccaatgcc
acctatggcacccacctgagcccacatctgccccaccgtgtgctgagcacctcctccacc
ctcactcgggactaccactcactgacccgcacacagcactcacagtcgtccacactgccc
agagactactccaccctcacctccctctcctcccagggcctccctcccatctgggaagac
gggaggagcaggcttccgctgtcctgggccctggggtcctggagtcgggctcagatgaag
gggctccccccgtccaggggctcacgagattctataatcctggctgggcagccagcagca
cccttctggggcccagattctcaaggtgctatgggtgtgcctgacacacccacccgcctt
gtgttctccgccctgggacccacatctctgaaagtgagctggcaggagcctcagtgtgag
cgcctgctgctgggctacagtgtggagtaccagctgctgaatggcggtgagctacacagg
ctcaacatccccaaccctggccaaacttctgtggtggtggaagacctcctgcccaaccac
tcctatgtgttccgtgtgcgggcccagagtcaggagggctggggccgagagcgtgagggt
gtcatcaccattgaatcacaggtgcacccgcagagcccactctgccccctgccaggatct
gccttcactctgagcacccccagtgccccaggcccattggtgttcactgccctgagcccc
gattcactgcagctgagctgggagcggccacggagacccaatggtgacatcctcggctat
ctggtgacctgtgagatggcccaaggaggagggccagccactacattccgggtggatgga
gacaaccctgagagccggctgaccgtgcctggcctcagtgagaacgtgccctacaagttc
aaggttcaggccaggactaccgagggcttcgggccagagcgtgaaggcatcatcaccatt
gaatcccaggatggaggtcccttcccacagctgggcacccattccgggctcttccagcac
ccactgcaaggcgagtacagcagcatcaccaccacccacaccagcaccactgagcccttc
ctaatggatggactgaccctggggtcccagcacctagagacaagtggctctctcacccgg
cacgtgacccaggaatttgtgagccggacactgactaccagtggaaccctcaatgcccag
gtggaccaacagtttttccaaacatga

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