Spermophilus citellus (European ground squirrel): 308636656
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Entry
308636656 CDS
T11988
Symbol
VPS53
Name
(RefSeq) vacuolar protein sorting-associated protein 53 homolog
KO
K20299
vacuolar protein sorting-associated protein 53
Organism
scil Spermophilus citellus (European ground squirrel)
Brite
KEGG Orthology (KO) [BR:
scil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
scil04131
]
308636656 (VPS53)
Membrane trafficking [BR:
scil04131
]
Protein recycling
Others
EARP complex
308636656 (VPS53)
Endosome - Golgi transport
Tethering complex
GARP complex
308636656 (VPS53)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps53_N
VPS53_C
Vps54_N
COG4_N
GrpE
FBF1
Sec8_N
Syndetin_C
DUF8042
GbsR_C
NBD94
TPR_CAND1
COG3_N
HAUS1
IFT74
WHD_1st_NFRKB
COG5_N
VPS51_Exo84_N
Motif
Other DBs
NCBI-GeneID:
308636656
NCBI-ProteinID:
XP_081128395
LinkDB
All DBs
Position
17:complement(28841482..28987255)
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AA seq
832 aa
AA seq
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MMEEEELEFVEELEAVLQLTPEVQLAIEQVFPSQDPLDQADFNAVEYINTLFPTEQSLAN
IDEVVNKIRLKIRRLDDNIRTVVRGQTNVGQDGRQALEEAQKAIQQLFGKIKDIKDKAEK
SEQMVKEITRDIKQLDHAKRHLTTSITTLNHLHMLAGGVDSLEAMTRRRQYGEVANLLQG
VMNVLEHFHKYMGIPQIRQLSERVKAAQTELGQQILADFEEAFPSQGTKRPGGPSNVLRD
ACLVANILDPKIKQEIIKKFIKQHLSEYLVLFQENQDVAWLDKIDRRYAWVKRQLVDYEE
KYGRMFPREWYMTERIAVEFCHVTRAELAKIMRARAKEIEVKLLLFAIQRTTNFEGFLAK
RFSGCTLTDGTLKKLESPPPSTNPFLEDESAPEMEELAIERGELDQPKKPKVPDNPFHGI
VSKCFEPHLYVYIESQDKNLGELIDRFVADFKAQGPPKPNTDEGGAVLPSCADLFVYYKK
CMVQCSQLSTGEPMIALTTIFQKYLREYAWKILSGNLPKTTTSSGGLTISSLLKEKEGSE
VAKFTLEELCLICSILSTAEYCLATTQQLEEKLKEKVDVSLTERINLTGEMDTFSTVISS
SIQLLVQDLDAACDPALTAMSKMQWQNVEHVGDQSPYVTSVILHIKQNVPIIRDNLASTR
KYFTQFCIKFANSFIPKFITHLFKCKPISMVGAEQLLLDTHSLKMVLLDLPSIGSQVVRK
APASYTKIVVKGMTRAEMILKVVMAPHEPLMVFVDNYIKLLTDCNTETFQKILDMKGLKR
SEQSNMLELLRQRLPTPPSGADGSSSLSLMAPTPEQESSRIRKLEKLIKKRL
NT seq
2499 nt
NT seq
+upstream
nt +downstream
nt
atgatggaggaagaggaactggagttcgtggaggaactggaagccgtgctgcagctcacg
cctgaggtgcagctagccatcgagcaggtgtttccaagccaggatcctttagatcaagca
gatttcaatgctgttgaatatatcaataccctgttcccaacggaacaatctctggcaaat
atagatgaagttgtgaacaaaattagactgaaaataaggagactggatgacaatattcga
acagttgtaagaggtcagacaaatgttgggcaggatggaaggcaagcacttgaagaggcc
cagaaagctattcaacaactcttcggcaaaatcaaagatatcaaagacaaagcagaaaaa
tcagaacaaatggtcaaagaaatcacccgtgatatcaagcaattagatcatgccaaacgc
cacctgaccacctcaatcacaacgctaaaccacctgcacatgttggcaggtggtgtggat
tccctcgaagccatgaccaggcgcagacagtatggagaagttgctaatcttcttcagggt
gtaatgaatgttctggaacacttccacaagtatatggggattccacagatccggcagctt
tctgaaagagtgaaggctgcgcaaacggagctaggacagcaaatcctggcagatttcgaa
gaggcatttccttcccagggtaccaagaggccaggaggacccagtaacgttctgcgagat
gcatgtctggttgctaatattttggaccccaaaatcaagcaagaaatcattaagaagttt
attaaacaacatctgtcagagtatctagtactttttcaagaaaatcaagatgttgcctgg
ctagacaaaattgatagacgctatgcctgggtaaaacgccagcttgtggactatgaagag
aaatatggccgaatgtttccacgggaatggtatatgactgagaggattgcagtagaattc
tgccatgtgacaagggcagaacttgccaaaatcatgcgtgccagagctaaggaaattgag
gtgaaattacttctttttgctattcagagaacgactaactttgaagggtttcttgcaaaa
cgcttctccggctgcaccctgacagatggaaccctgaaaaagctcgagtctccaccacca
tctaccaaccccttcctggaagatgagtcagcaccagagatggaggagctggcaatcgag
aggggagagttagatcaaccaaagaagcctaaagtcccagacaacccatttcatggcatt
gtttccaagtgttttgagcctcatctgtatgtgtatattgagtcccaggataaaaacctt
ggagagctgattgataggtttgtggccgatttcaaagcccaggggccacctaagcccaac
actgatgaggggggcgctgtgctccccagctgtgctgacctcttcgtctactacaagaag
tgcatggtacagtgctcacagctcagtactggggagccaatgattgccctgacaaccatt
ttccagaagtacctccgagaatacgcctggaaaatcctctctggcaacctgcccaaaacc
acaaccagcagtggagggttgaccatcagcagccttctcaaggaaaaggagggctcagaa
gtggccaagttcactcttgaggagctctgcctcatctgcagcatattgagcacagcagaa
tactgtttggccaccacccagcagttagaagaaaaactcaaagaaaaagttgatgtaagt
ctgactgaacgaatcaatctcacgggagaaatggacacattcagcactgtcatctccagc
agtattcagttgctggttcaggatctagatgcagcctgcgatcctgccttgactgccatg
agcaagatgcagtggcagaatgtggaacatgttggtgaccagagcccctatgtcacttct
gtcattcttcacattaagcagaatgtccccatcatccgtgacaacctggcctccacacgg
aaatacttcactcaattctgcatcaaatttgcaaactccttcattcctaaattcatcacc
cacctcttcaagtgcaagccaattagcatggtgggagcagaacagctgctgctggacacc
cactccctgaagatggtcctgctcgacctcccttccattggctcacaggtggtgaggaag
gcacctgccagttacactaagattgtcgtgaaaggcatgacccgggctgagatgatcctc
aaggtagtgatggccccccatgagccattgatggtgtttgtggacaactacatcaaactc
cttacagactgtaacacagaaaccttccagaagatactggacatgaaggggctgaagaga
agtgagcagagcaacatgctggaactcctgcgccagagacttcccaccccgccctcaggg
gcagatggctccagctctctgtccctgatggctcctacaccagagcaggaatcatctcgc
atccgcaaacttgagaaactaattaagaagagactttag
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