Spermophilus citellus (European ground squirrel): 308636981
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Entry
308636981 CDS
T11988
Symbol
TRPV1
Name
(RefSeq) transient receptor potential cation channel subfamily V member 1 isoform 1
KO
K05222
transient receptor potential cation channel subfamily V member 1
Organism
scil Spermophilus citellus (European ground squirrel)
Pathway
scil04080
Neuroactive ligand-receptor interaction
scil04750
Inflammatory mediator regulation of TRP channels
Brite
KEGG Orthology (KO) [BR:
scil00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
308636981 (TRPV1)
09150 Organismal Systems
09157 Sensory system
04750 Inflammatory mediator regulation of TRP channels
308636981 (TRPV1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
scil04040
]
308636981 (TRPV1)
Ion channels [BR:
scil04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
308636981 (TRPV1)
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Paralog
GFIT
Motif
Pfam:
Ank_2
Ank
YVC1_C
Ion_trans
Ank_3
Ank_5
Ank_4
Motif
Other DBs
NCBI-GeneID:
308636981
NCBI-ProteinID:
XP_081129016
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All DBs
Position
17:25919276..25967391
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AA seq
847 aa
AA seq
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MKKWANLDSGESEDPPHEDSCPDPPDGDPNSKQSPAKPHIFSTTKSRTRLFGKGDSEEAS
PMDCSYEEGELASCPTITVSSVVIIQRPGDALTCARQLSQDSVSAGAEKPLKLYDRRSIF
DAVAQNNCQELESLLPFLQKSRKRLTDSEFKDPETGKTCLLKAMLNLHNGQNDTISLLLD
IARQTDSLKEFVNASYTDSYYKGQTALHIAIERRNMALVTLLVENGADVQAAANGDFFKK
TKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPADISARDSVGNTVLHALVEVADNT
ADNTKFVTSMYNEILILGAKLHPTLKLEELINKKGLTPLALAASSGKIGVLAYILQREIQ
EPECRHLSRKFTEWAYGPVHSSLYDLSCIDTCEKNSVLEVIAYSSSETPNRHDMLLVEPL
NRLLQDKWDRFVKRIFYFNFFVYCLYMIVFTTAAYYRPVDGLPPYKLKNTVGDYFRVTGE
ILSVSGGVYFFLRGIQYFLQRRPSMKTLFVDSYSEMLFFVQSLFMLGSVVLYFSHRKEYV
ASMVFSLAMGWTNMLYYTRGFQQMGIYAVMIEKMILRDLCRFMFVYLVFLFGFSTAVVTL
IEDGKNYSEPVEYASHRWRAPGCRPPDSYNSLYSTCLELFKFTIGMGDLEFTENYDFKAV
FIILLLAYVILTYILLLNMLIALMGETVNKIAQESKNIWKLQRAITILDTEKSFLKCMRK
AFRSGKLLQVGYTPDGKDDYRWCFRVDEVNWTTWNTNVGIINEDPGNCEGVKRTLSFSLR
SGRGLFHWIWKSGLTGFYFYFFISTLCFFTCLAFWEKSSLFDCVLGFREKLEELCPGSPF
KGCKHSR
NT seq
2544 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagtgggctaacttagactcaggtgagtctgaggacccaccccatgaggattcc
tgcccagacccccctgatggagaccctaactccaagcaatctccagccaagcctcacatt
ttctccacgaccaagagccgcactcggctctttgggaagggtgattcagaggaagcatct
cctatggattgctcttatgaggaaggtgagctggcctcctgcccaaccatcacagtcagc
tcagttgttatcatccagaggcctggggatgctctcacctgtgccaggcagctgtcccag
gactctgtctctgctggtgctgagaagcccctcaagctctacgatcgcaggagtatattt
gatgctgtcgctcagaataactgccaggagctggagagcctgctgcccttcctccagaag
agcaggaagcgcctcacggacagcgagttcaaagaccccgagacaggaaagacttgtttg
ctgaaagccatgctcaacttgcacaatgggcagaatgacaccatctctttgctcctggac
attgcccggcaaacagacagcttgaaggagtttgtcaatgccagctacacagacagctac
tacaagggccagacagcactgcacattgccattgagaggcggaacatggcactggtgacc
ctcctggtggagaatggagcagatgtccaggctgctgcaaatggggacttcttcaagaaa
accaaggggcgacctggcttttactttggtgagctgcccctctccctggctgcgtgcacc
aaccagttggccattgtgaagttcctgctgcagaattcctggcagccggccgacatcagc
gccagggactcagtgggcaacacagtgctgcacgccctggtggaggtggcagacaacacg
gccgacaacaccaagtttgtgacgagcatgtacaacgagatcctgatcttgggagccaag
ctccaccctacattgaagttggaggaactcatcaacaagaaggggctcacaccgttggct
ctggccgccagcagtgggaagattggggtcttggcctatattctccagagggagatccag
gagcctgagtgcagacacctgtctaggaagttcaccgagtgggcctatgggcctgtgcac
tcctcactctatgacctgtcctgcatcgatacctgtgagaagaattcagtgctggaagtg
attgcctacagcagcagcgagacccctaatcgccatgacatgctcctggtggagcctctg
aaccgactcctgcaggacaagtgggacagattcgtcaagcgcattttctacttcaacttc
tttgtctactgcttgtatatgatcgtcttcaccacagccgcctattataggcctgtggat
ggcttgcctccctacaagctgaaaaacacagttggagactatttccgagtcactggagag
attctgtctgtatctgggggagtctacttttttctccgagggattcaatatttcctgcag
aggcggccatctatgaagaccttatttgtggatagctacagtgagatgcttttctttgtg
cagtccctgttcatgctgggatccgtggtgctgtacttcagccaccgcaaggagtatgtg
gcttccatggtgttctccctggcaatgggttggaccaacatgctctactacacccgtggc
ttccagcagatgggcatctatgctgtcatgatcgagaagatgatcctcagagacctgtgt
cggttcatgtttgtctacctcgttttcttgttcgggttttccacagcggtagtaacactg
atcgaggatgggaagaattactctgagccggttgagtacgcatcacataggtggcgggct
cctggctgcaggccacccgacagctacaacagcctatactccacgtgcctggagctgttc
aagttcaccatcggcatgggtgacctggagttcacggagaactatgacttcaaagctgtc
ttcatcatcctgctgttggcctatgtgattctcacctacatcctcctactcaacatgctc
atcgccctcatgggggagaccgtgaacaagattgcacaggagagcaagaacatctggaaa
ctgcagagagccatcaccatcctggacacggagaagagcttcctaaagtgcatgaggaag
gccttccgctcaggcaagctgctgcaggtggggtacacacctgacggcaaggatgactac
agatggtgcttcagggtggacgaggtaaactggaccacctggaacaccaatgtgggcatc
atcaatgaggaccctggcaactgtgagggtgtaaagcgcaccctgagcttctccctgagg
tcaggcagaggtttatttcactggatatggaagtctgggttaacaggtttttatttttat
ttttttatctcaacactttgtttcttcacttgccttgccttctgggagaagtcatcatta
tttgattgtgttctcggtttcagggagaaactggaggaactttgccctggttcccctttt
aagggatgcaagcactcgagatag
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