Spermophilus citellus (European ground squirrel): 308638223
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Entry
308638223 CDS
T11988
Symbol
SPTBN4
Name
(RefSeq) spectrin beta chain, non-erythrocytic 4
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
scil Spermophilus citellus (European ground squirrel)
Pathway
scil04517
IgSF CAM signaling
scil04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
scil00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
308638223 (SPTBN4)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
308638223 (SPTBN4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
scil04812
]
308638223 (SPTBN4)
Cytoskeleton proteins [BR:
scil04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
308638223 (SPTBN4)
Intermediate filaments
Intermediate filament-binding proteins
308638223 (SPTBN4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
Helical_needle
RASSF_helical
Rv3651-like_N
PH_11
FlgK_D1
Motif
Other DBs
NCBI-GeneID:
308638223
NCBI-ProteinID:
XP_081131583
LinkDB
All DBs
Position
18:complement(14105120..14179583)
Genome browser
AA seq
2562 aa
AA seq
DB search
MAQVPGEVDNMEGLPAPNNNNLAARWESPDRGWEREPPAASTAAASLFECSRIKALADER
EAVQKKTFTKWVNSHLARVGCHIGDLYADLRDGFVLTRLLEVLSGEQLPRPTRGRMRIHS
LENVDKALQFLKEQRVHLENVGSHDIVDGNHRLTLGLVWTIILRFQIQVIKIETEDNRET
RSAKDALLLWCQMKTAGYPEVNIQNFTTSWRDGLAFNALIHRHRPDLVDFGKLTKSNANY
NLQRAFRTAEQHLGLARLLDPEDVNMEAPDEKSIITYVVSFYHYFSKMKALAVEGKRIGK
VLDQVLEVGKIIERYEELAAELLAWIHRTVGLISNQKFANSLSGVQQQLQAFTAYCTLEK
PVKFQEKGNLEVLLFSIQSKLRACNRCLFVPREGCGIWDIDKAWGQLEKAEHEREAALRA
ELIRQEKLELLAQRFDHKVAMRESWLNENQRLVSQDNFGYELPAVEAAMKKHEAIEADIA
AYEERVQGVAELAQALAAEGYYDARRVAAQRDSVLRQWALLTGLVGARRTRLEQNLALQK
VFQEMVYMVDWMEEMQAQLLSRECGQHLVEADDLLQKHGLLEGDIAAQSERVEALNAAAL
RFSQLQGYQPCDPQVICNRVNHVHGCLAELQEQASRRRAELEASRSLWALLQELEEAESW
ARDKERLLEAAGGGGGGAGAAGGAHDLSSTARLLAQHKILQGELGGRRALLQQALRRGEE
LAAAGGSVGPGAETVQLAGLAERAASARRRWQRLEEAAARRERRLQEARALHQFGADLDA
LLDWLRDAYRLAAAGDFGHDEASSRRLARQHRALTGEVEAHRGPVGGLRRQLATLGGASG
AGPLVVALQVRVVEAEQLFAEVTEVAALRRQWLRDALAVYRMFGEVHACELWIGEKEQWL
LAMRVPDSLDDVEVVQHRFESLDQEMNSLMGRVLDVNHTVQELVEGGHPSSDEVRSCQDH
LNSRWNRIVELVEQRKEEMSAVLLVENHVLEVAEVRAQVREKRRAVESAPRAGGALQWRL
SGLEAALQALEPRQAALLEEAALLAARFPAQATRLHQGAEELGAEWGALASSAQACGEAV
AAAGRLQRFLHDLDAFLDWLVRAQEAAGGGEGPLPSSLEEADALLARHAALKEEVDQREE
DYARIVAASEALLAADGAELGPGLALDEWLPHLELGWHKLLGLWEARREALVQAHVYQLF
LRDLRQALAVLRNQEVALSGVELPGTVESVEEAIKRHRDFLTTMELNQQKMQVAVQAAEG
LLRQGNAYGEQAQEAVARLLEKSQENQLQAQQWMQKLHDQLGLQHFLRDCHELDGWIHEK
MLMARDGSREDGHKLHKRWLRHQAFMAELAQNKEWLEKIEREGQQLMQEKPELAASVRKK
LGEIRQCWAELESTTQAKARQLFEASKADQLVQSFAELDKKLLHMESQLQDVDPGGDLAT
VNSQLKKLQSMESQVEEWYREVGELQAQTAALPLEPASKELVGERQNAVGERLVRLLEPL
QERRRLLLASKELHQVAHDLDDELAWVQERLPLAMQTERGSGLQAVQQHIKKNQGLRREI
QAHGPRLEEVLERAGALASLRSPEAEAVRRGLEQLQSAWAGLREAAERRQQVLDAAFQVE
QYYFDVAEVEAWLGEQELLMMSEDKGKDEQSTLQLLKKHLQLEQGVENYEESIAQLSRQC
RALLEMGHPDSEQISRRQSQVDRLYVALKELGEERRVGLEQQYWLYQLSRQVDELEHWIA
EKEVVAGSPELGQDFEHVSVLQEKFSEFASETGTAGRERLAAVNQMVDELIECGHTAAAT
MAEWKDGLNEAWAELLELMGTRAQLLAASRELHKFFSDARELQGQIEEKRRRLPRLTAPP
EPRPSASSMQRTLRAFEHDLQLLVSQVRQLQEGAAQLRTVYAGEHAEAIASREQEVLQGW
KELLAACEDARLHVSSTADALRFHSQARDLLSWMDGIAGQIGAADKPRDVSSVEVLMNYH
QGLKTELEARVPELTACQELGRSLLLNKSAMADEIQAQLDKLGTRKEEVSDKWDRHWEWL
QQMLEVHQFAQEAVVADAWLTAQEPLLQSRELGSSVDEVEQLIRRHEAFRKAAAAWEERF
SSLRRLTTIEKIKAEQSKQPPTPLLGRKFFGDPTELAAKAAPLLRPGGYERGLEPLARRA
SDTLSAEVRTRVGYVRQELKPERLQPRIDRLPEVPGRVEPAAPPAALENIAAETPGTPAA
AEQVRPRPERQESADRTEELPRRRRPERQESADQPEESARRRRPERQESTEHEVAHSLTL
GRYEQMERRRERRERRLERQESSEQETPIRGELAKGKATLADIVEQLQEKEAGPGLPVGV
PSLPQPRELPPGRLPNGLEPPERTPRPDRPRARDRPKPRRRPRPREGGEGGGSRRSRSAP
AQGGSAPAPPPPPTHTVQHEGFLLRKRELDANRKSSNRSWVSLYCVLSKGELGFYKDSKG
PASGGTHGGEPLLSLHKATSEVASDYKKKKHVFKLQTQDGSEFLLQAKDEEEMNGWLEAV
AASVTEHAEIARWGQTLPTTSSTDEGNPKREGGERRASGRRK
NT seq
7689 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaggttccgggggaggtggacaacatggagggcctgcccgcccccaacaacaac
aaccttgcagctcgctgggagagtccagaccggggctgggagcgggaacctccagctgct
tccacggcagctgcttctctctttgagtgctcacggatcaaggccttggcagacgagcgg
gaggccgtgcagaagaaaaccttcaccaagtgggtgaactcgcacctcgcccgcgtgggc
tgccacatcggggacctctatgcggacctccgggatggctttgtgctgactcggctcctg
gaagtgctgtcgggggagcagctgccgaggcccacacggggccgcatgcggatccactcg
ctggagaacgtggacaaggctctgcagttcctcaaggagcagcgtgtgcacctggaaaac
gtgggctctcatgacatcgtggacgggaatcaccgactcacgctggggttggtctggacc
atcatcctgcgcttccagattcaggtcatcaaaattgagaccgaggacaacagagagacg
cgctcggccaaggacgctctgctcctgtggtgccagatgaagacggctggttaccccgag
gtaaacatccagaatttcaccaccagctggcgggacggcttggccttcaatgccctcatt
catcggcacaggcctgaccttgtggacttcggcaaactcaccaaatccaacgccaactac
aacctgcagagagccttccgcacagctgagcagcacctggggctggcgcgtctgctggac
cccgaagatgtgaacatggaggctcccgatgagaagtctatcatcacctatgtggtctct
ttctaccactacttctccaagatgaaggccctggctgtggaggggaagcggattgggaag
gttctggaccaggtgctggaggtggggaagatcatagagcgctatgaggagctggcggct
gagctgctggcttggatccaccgcaccgtgggcctcatcagcaaccagaagtttgccaac
tcgctgagtggggtgcagcagcagctgcaggctttcacggcctattgcaccctggagaaa
cccgtcaagtttcaggaaaaggggaacttggaggtactgctcttcagcatccagagcaaa
ctgcgtgcctgcaaccgttgcctttttgtgcctcgggagggctgtggcatctgggatatc
gacaaggcatggggccaactggagaaggcagagcatgagcgggaggctgccctacgggct
gagctgatccggcaggaaaagctggaactcctggctcagaggttcgaccacaaggtggcc
atgagggagagctggctgaatgagaaccagcgcctggtctctcaggacaactttgggtat
gagttgccagcagtggaggcagccatgaagaagcacgaagcgattgaggcggacattgca
gcctacgaggagcgggtgcagggtgtggcagaactggcccaggcgttggcagctgaaggc
tactatgatgcccggcgggtggcagcccagcgtgacagcgtcctgcgtcagtgggccctg
ctgactgggctggtaggtgcccggcggacccgactggagcagaacctggccctgcagaag
gtcttccaggagatggtctacatggtggactggatggaggagatgcaggctcagctgctg
tcccgggagtgtgggcagcacctggtggaggcggacgacctgttgcagaagcacggcctg
ctggagggggacatcgctgcccagagcgagagggtggaggctctcaatgctgcagccctg
cgtttctcccagctgcagggctaccaaccctgcgacccgcaggtcatctgcaaccgcgtg
aaccacgtgcacggctgtctggcggagctgcaggagcaggcgtcgcggcgtcgcgcggag
ctggaggcctcgcggagcctgtgggcgctgctgcaggagctggaggaggcagagagctgg
gcccgggacaaggagcgcctcctggaggccgcgggcggcggcggcggcggggcaggcgcg
gcgggtggtgcgcacgacctgtccagcaccgcgcgccttctggcgcagcacaagatcttg
cagggcgagctaggcgggcggcgggcgctgctgcagcaggccctgcggcgtggcgaggag
ctggctgcggccggcggctccgtgggcccgggcgcagagaccgtgcagctggcgggtctg
gcggagcgcgcggcgagcgcacggcgccgctggcagcggctggaggaggcggcggcgcgg
cgcgagaggcggctgcaggaggcgcgggccctgcatcagtttggcgccgatcttgacgca
ctgctggactggctccgcgacgcttaccgcctggcagccgccggcgactttggtcacgac
gaagcgtccagtcgccgcctggcacgccagcaccgcgctctcaccggggaggtggaggcg
catcgcgggccggtgggcggcctgcggcgccagctggcgacactggggggcgccagcggg
gccggacctctggtggtggcactacaagtgcgtgtggtagaggccgagcagttgttcgcc
gaggtgaccgaggtggccgcactgcggcgccagtggctgcgggacgcgctcgccgtgtac
cgaatgttcggggaggtgcacgcgtgtgagctgtggatcggtgagaaggagcagtggtta
ctcgccatgcgtgtgcccgactcgctggacgacgtggaggtggtacagcaccgattcgag
agcctggaccaggagatgaacagtctgatgggccgtgtcctggatgtgaaccacacggtc
caggagctagtggaagggggtcaccccagctcagatgaggtgcgctcctgccaggaccac
ctcaacagcaggtggaaccgcatcgtggagctggtggaacagcgcaaagaggagatgagc
gcggtactgctggtggagaaccacgtgctggaggtagccgaggtgcgcgcccaggtgcgc
gagaagcggcgagccgtggagagcgcaccccgcgctggcggcgccctgcagtggcgcctc
agcggccttgaggctgctttgcaagcgctcgagccgcgccaggcggcccttctggaggag
gcagccctgctggccgcgcgcttccccgcacaggcgacgcggcttcaccagggcgcggag
gagctgggagccgagtggggcgcgctggccagctcagctcaggcctgcggcgaggcggtg
gcggcggccggacgtttacagcgtttcctgcacgacctggacgctttcctggattggctc
gtgcgcgcccaggaggcggcgggcggcggggagggccccctgcccagcagcctggaagag
gcggacgcgctgttggcgcgccacgcggcgctcaaggaggaagtggaccagcgcgaggag
gactatgcgcgcattgtggcagccagcgaagcgctgctggcggcagacggcgccgagctc
ggcccaggcctggcgctcgacgaatggctgccacacctcgaacttggctggcacaaactg
ctcggcttgtgggaggcgcgcagggaggcgctggtccaggcgcacgtctaccagctcttc
ctgcgcgacctacgccaagcgctcgctgtgctgcgcaaccaggaggtggcgctgtctggt
gtggagctcccgggcaccgtggagtcggtggaggaggcgataaaaaggcaccgggatttt
ctcaccacgatggagctgaaccagcagaagatgcaggtggccgtgcaggcggctgagggc
ctgctgaggcagggcaacgcctatggggagcaggcccaggaggctgtggcccggctgctg
gagaagagccaagaaaaccagctacaggctcagcagtggatgcagaagctccatgaccag
cttgggctgcagcacttcctccgagactgccacgagctggatggctggatccatgagaag
atgctgatggcgcgagatggttctcgagaagatggccacaagctgcacaagcgatggctc
cggcaccaggcattcatggccgagctggctcagaataaggagtggctggagaagatcgag
agggagggccagcaactgatgcaggagaagccggagttggcggcctccgtgcggaagaag
ctgggtgagatccggcagtgctgggcagagctggagagtaccacccaggccaaggcccgg
cagctcttcgaagccagcaaggccgaccagctggtgcagagcttcgcggagctggacaag
aagctccttcacatggaaagccagctccaagatgtggaccccggtggggacctggctacg
gtcaacagccagctcaagaaattgcagtcgatggaatcacaggtggaggagtggtaccgc
gaggtaggagagttgcaggcgcagacagcggcgcttcctttggagccggcgagcaaggag
ctggtgggcgagcggcagaacgcggtgggcgagcggctggtgcgcctgctggagccgttg
caggagcgccgccgcttgttgttggcctccaaggagctgcatcaggtggctcacgaccta
gacgacgagctggcatgggttcaggagcggctgccactggccatgcagacagaacgaggc
agtggtttacaggctgtccagcagcacatcaaaaagaaccagggcctgcggcgggagatc
caggcgcatgggccgcgcctggaggaggtgttggagcgcgcgggcgcgctggcctcgctg
cgcagcccagaggcggaggccgtgcgccgtggcctggagcaactgcagagcgcctgggca
ggactgcgcgaggcggctgagcggaggcagcaggtgctggacgccgccttccaggtggaa
cagtactacttcgacgtggccgaggtggaggcatggctgggcgagcaggagctgctcatg
atgagtgaggacaagggcaaggatgaacagagcaccctgcagctgctcaagaagcacctg
cagctggagcagggcgtggagaactacgaagagagcatcgcgcagctgtcgcgccaatgc
cgggcgctgctggagatggggcacccggacagcgagcagatcagccggcggcagtctcag
gtggaccgcctgtacgtggcgctcaaggagcttggggaggaacgaagggtgggcctcgag
cagcagtactggctgtaccagctcagtcgccaggtggatgagctagagcactggattgct
gaaaaggaggtggtggctggttcaccagagctgggccaggacttcgagcatgtctcggtg
ctgcaggagaaattctcagagttcgccagtgagacgggcacggcaggacgtgagcggctg
gcagctgtgaaccagatggtggatgagctgatcgagtgtggccatacggcagcagccacc
atggctgagtggaaggatgggctgaacgaggcctgggccgagctgctggagctcatgggt
actcgggcccagctgctggccgcctctcgggagctgcataagttcttcagtgatgcccga
gagcttcaaggacaaattgaggaaaagcggaggcgactgcctcgccttactgccccacct
gagccaagacccagtgccagctccatgcaaaggaccttgcgagcctttgagcatgatctg
cagctcctcgtgtcccaggtacggcagctgcaggagggcgctgcccagctgcggaccgtg
tacgcgggcgagcacgccgaggccatcgccagccgcgagcaagaggtgctgcagggctgg
aaagaactgctggcagcctgcgaggacgcccgcctgcatgtcagctccacggccgacgcc
ctgcgcttccacagccaggcccgcgacctgctctcctggatggacggcatcgcgggccag
atcggggcagctgacaagcccagggatgtgtcatcggtggaggtgctcatgaactaccac
cagggcctgaagactgagctggaggcacgggtgcctgagctgactgcctgccaggagctg
gggcgctcccttctgctcaacaagagtgccatggctgatgagatccaggcacagctggac
aaactgggaaccaggaaggaggaggtgtcagacaaatgggaccgccattgggagtggctg
cagcagatgctggaagtacatcagtttgcccaggaggcagtggtggctgatgcctggctg
acagcccaggagccactcctgcagagccgggagctgggcagcagcgtggatgaggtagag
cagcttatccggagacacgaggccttccgcaaggcagctgcagcctgggaagagaggttc
agctctctgcgacgcctgaccacgattgagaaaatcaaggcggaacaaagcaagcaacca
cccactcccctgctggggcgcaagttctttggggaccccacggaactggcggccaaggcg
gcacctctactgcggccaggaggctatgaaaggggcttggagcccttggcccgccgggcc
tcggacacgctgtcagctgaggtgcggacccgggtggggtacgtgcgccaggagctcaag
cccgagcgcctccagccacgcattgaccggctgccggaggtccccgggagggtagagcct
gcggcccctccggccgcactggagaacattgcagcggagactcccgggacccctgcggct
gcggagcaggtccggcccagaccggagcgccaggagtcagcggatcgcacggaggagctg
ccccggaggcggcggccggagcgccaagaatcggctgaccaacccgaggagtctgcgcgg
aggaggagaccagaacgacaggaatccacggagcatgaggtggcacatagccttacactg
ggccgctatgagcagatggagaggcggcgcgagcggcgcgagcggcggttggagcggcag
gagtccagcgaacaggagacgcccataagaggagagctggccaaagggaaggccaccctg
gctgacattgtggagcagctgcaggagaaagaggcgggcccagggctccctgttggggtg
ccttcgctgcctcagcctcgcgagcttccccctggccgcctgcccaacgggcttgagccg
cccgagcggacacctcggccggatcggccgcgggcgcgggaccggcccaagccgcgacgg
cggccgcggccaagagagggtggtgagggcgggggaagccggcgctcgcgctccgctccg
gcccagggcggctccgcccccgcgcctccgccaccgcccactcacacagtgcagcacgag
ggcttcctgctgcgcaagcgcgagctcgacgctaaccgcaagtcgtccaaccggtcgtgg
gtgagcctgtactgcgtcctcagcaagggggagctgggcttctacaaggactccaaaggc
ccagcatcagggggaacacatggtggggagccactgctcagcctgcacaaggccaccagc
gaggtggctagtgactacaagaaaaagaagcatgtcttcaagctccagacccaggatggc
agtgaatttttgctccaggctaaagatgaggaggagatgaacggttggctagaggctgtg
gctgcctcagtgacagaacacgcagagattgcacgctggggccagacactacccacaacg
tcctccacagacgagggcaaccccaagcgcgagggaggggagcgcagagccagcgggcgc
cggaagtga
DBGET
integrated database retrieval system
