Spermophilus citellus (European ground squirrel): 308639097
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Entry
308639097 CDS
T11988
Symbol
SMC1A
Name
(RefSeq) structural maintenance of chromosomes protein 1A isoform 1
KO
K06636
structural maintenance of chromosome 1
Organism
scil Spermophilus citellus (European ground squirrel)
Pathway
scil04110
Cell cycle
scil04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
scil00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
308639097 (SMC1A)
04114 Oocyte meiosis
308639097 (SMC1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
scil03036
]
308639097 (SMC1A)
Chromosome and associated proteins [BR:
scil03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
308639097 (SMC1A)
Meiosis-specific proteins
Cohesin complex and associated proteins
308639097 (SMC1A)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_15
AAA_21
AAA_29
ABC_tran
Mce4_CUP1
Motif
Other DBs
NCBI-GeneID:
308639097
NCBI-ProteinID:
XP_081133226
LinkDB
All DBs
Position
X:complement(45148174..45205147)
Genome browser
AA seq
1233 aa
AA seq
DB search
MGFLKLIEIENFKSYKGRQIIGPFQRFTAIIGPNGSGKSNLMDAISFVLGEKTSNLRVKT
LRDLIHGAPVGKPAANRAFVSMVYSEEGAEDRTFARVIVGGSSEYKINNKVVQLHEYSEE
LEKLGILIKARNFLVFQGAVESIAMKNPKERTALFEEISRSGELAQEYDKRKKEMVKAEE
DTQFNYHRKKNIAAERKEAKQEKEEADRYQRLKDEVVRAQVQLQLFKLYHNEVEIEKLNK
ELASKNKEIEKDKKRMDKVEDELKEKKKELGKMMREQQQIEKEIKEKDSELNQKRPQYIK
AKENTSHKIKKLEAAKKSLQNAQKHYKKRKGDMDELEKEMLSVEKARQEFEERMEEESQS
QGRDLTLEENQVKKYHRLKEEASKRAATLAQELEKFNRDQKADQDRLDLEERKKVETEAK
IKQKLREIEENQKRIEKLEEYITTSKQSLEEQKKLEGELTEEVEMAKRRIDEINKELNQV
MEQLGDARIDRQESSRQQRKAEIMESIKRLYPGSVYGRLIDLCQPTQKKYQIAVTKVLGK
NMDAIIVDSEKTGRDCIQYIKEQRGEPETFLPLDYLEVKPTDEKLRELKGAKLVIDVIRY
EPPHIKKALQYACGNALVCDNVEDARRIAFGGHQRHKTVALDGTLFQKSGVISGGASDLK
AKARRWDEKAVDKLKEKKERLTEELKEQMKAKRKEAELRQVQSQAHGLQMRLKYSQSDLE
QTKTRHLALNLQEKSKLESELANFGPRINDIKRIIQSREREMKDLKEKMNQVEDEVFEEF
CREIGVRNIREFEEEKVKRQNEIAKKRLEFENQKTRLGIQLDFEKNQLKEDQDKVHMWEQ
TVKKDENEIEKLKKEEQRHMKIIDETMAQLQDLKNQHLAKKSEVNDKNHEMEEIRKKLGG
ANKEMTHLQKEVTAIETKLEQKRSDRHNLLQACKMQDIKLPLSKGTMDDISQEEGSSQGE
ESVSGSQRTSSIYAREALIEIDYGDLCEDLKDAQAEEEIKQEMNTLQQKLNEQQSVLQRI
AAPNMKAMEKLESVRDKFQETSDEFEAARKRAKKAKQAFEQIKKERFDRFNACFESVATN
IDEIYKALSRNSSAQAFLGPENPEEPYLDGINYNCVAPGKRFRPMDNLSGGEKTVAALAL
LFAIHSYKPAPFFVLDEIDAALDNTNIGKVANYIKEQSTCNFQAIVISLKEEFYTKAESL
IGVYPEQGDCVISKVLTFDLTKYPDANPNPNEQ
NT seq
3702 nt
NT seq
+upstream
nt +downstream
nt
atgggtttcctgaaactgattgagatcgagaactttaaatcgtataagggtcgacagatt
atcggaccatttcagaggttcaccgccatcattggacccaatggctctggtaagtcaaat
ctcatggatgctatcagctttgtgctaggtgaaaaaaccagcaacctgagggtaaagacc
ctgcgggacctgatccatggagcacctgtgggcaaaccagctgccaaccgggcctttgtc
agcatggtctactctgaggagggtgctgaggatcgcacctttgctcgtgtcattgtagga
ggttcttctgaatacaagatcaacaacaaagtggtccagctacatgagtacagtgaggaa
ttagagaaattgggcattctcatcaaagctcgtaacttcctcgtctttcagggtgctgtg
gaatctattgccatgaagaaccccaaagagaggacagctctatttgaagagatcagtcgc
tctggggagctggcccaggagtatgataagcgaaagaaggaaatggtgaaggctgaagag
gacacacaatttaattaccatcgcaagaaaaacattgcagctgaacgcaaggaggccaaa
caggaaaaagaagaggcggaccgctaccagcgcctgaaagatgaggtggtacgagcccag
gtacagctgcaactctttaagctttaccataatgaagtagaaatcgagaaactcaacaag
gaactggcatcaaagaacaaagagattgagaaagacaagaagcgaatggacaaggtagag
gatgagctgaaggagaagaagaaggagctgggcaaaatgatgcgggagcagcagcagatc
gagaaggagatcaaggagaaggactcagagctgaatcagaagcgacctcagtacatcaaa
gccaaggagaatacctcccacaaaatcaagaagctggaagcagctaagaagtctctgcag
aatgctcagaagcactataaaaagcgtaaaggtgacatggatgaactggagaaggagatg
ctgtctgtggagaaggcccggcaggagtttgaagaacggatggaagaggagagtcagagt
cagggcagagacttgaccctggaggagaatcaggtaaagaaataccaccggctgaaagaa
gaagccagcaagagagcagctactttagcccaggagctggagaagttcaatagagaccag
aaagctgaccaggaccgtttggatctggaagagcggaagaaagtagaaacagaggccaag
atcaagcagaagctgcgggagattgaagagaatcagaagcggattgagaagctggaggaa
tacatcactactagcaagcaatccctagaggagcagaagaaactagagggagaactgact
gaggaggtggagatggccaagaggcgaatagatgagatcaataaggagctgaatcaggtg
atggagcagttgggggatgcacgcatagaccgccaggagagcagccgtcagcagcgaaag
gcagagataatggaaagcatcaagcgcctttaccctggctctgtgtatggccgcctcatt
gacctctgccagcccacacaaaagaagtatcagattgctgtgaccaaggttttgggcaag
aacatggatgccattattgtagactcagaaaagacaggccgggattgtattcagtatatc
aaggaacagcgtggggagccagagaccttcttgcctcttgactacctggaggtgaaacct
acagatgaaaaactccgggaactgaaaggggccaagctagtgattgatgtgattcgctat
gagccacctcacatcaaaaaagccctgcagtatgcttgtggcaatgcccttgtctgtgac
aatgtagaagatgcccgccgcattgcctttggaggccatcagcgtcacaagacagttgca
ctggatgggaccctgttccagaagtcaggagtcatctctggtggagccagtgacctgaaa
gcgaaggcacggcgctgggatgagaaagcagtagacaagttgaaagagaagaaggagcgg
ttgacagaggagctgaaagagcaaatgaaggcaaagcggaaagaggcagagctgcgtcag
gtgcagtctcaggcccatggattgcagatgcgactcaagtactcacagagcgacctagaa
cagaccaagacacgacatctggcactaaatctccaggaaaagtccaagctggagagtgag
ctggccaacttcgggcctcgaattaatgatatcaagaggattattcagagccgagagagg
gaaatgaaagacttgaaagagaagatgaaccaggtagaggatgaggtatttgaagaattt
tgtcgggagattggtgtccgcaacatccgagaatttgaggaagagaaggtgaagcgacag
aatgaaattgccaagaagcgtttggagttcgaaaatcagaagactcgcttgggcatccag
ttggattttgaaaagaaccaactgaaggaagaccaggataaagtacacatgtgggaacag
acagtaaaaaaggatgaaaatgagatagaaaaactcaagaaggaagaacaaagacatatg
aagatcatagatgagaccatggcccagctacaagacctgaagaatcagcacctggccaag
aagtcagaagtgaatgacaagaatcacgagatggaggaaattcggaagaaacttgggggc
gccaacaaggaaatgactcatttacagaaggaggtaacagccattgagaccaaacttgaa
cagaagcgcagtgatcgccacaatttgctacaggcctgcaagatgcaagacatcaagttg
ccgctgtcaaagggtactatggatgatattagtcaggaagagggtagctcccaaggggag
gaatcagtgagtggttcccagagaacttccagtatctatgctcgagaagccctcattgaa
atcgactacggtgacctgtgtgaggatctgaaggatgcccaggctgaggaggaaatcaag
caggaaatgaacacactgcagcagaaactgaatgagcagcagagtgtgcttcagcgaatt
gctgcccccaacatgaaggccatggaaaagctggaaagtgtccgagacaagttccaggag
acctcagatgaatttgaggcagcccgaaagcgagcaaagaaggccaaacaggcttttgaa
cagattaagaaggagcgctttgaccgtttcaatgcttgttttgaatctgtggctactaac
attgatgagatctacaaggctctgtctcgtaacagcagtgcccaggcattcttgggccct
gagaaccctgaggagccctacttggatggtatcaactacaactgtgtagctcctggcaaa
cgcttccggcctatggataacttgtcagggggggagaagacagtggcagctctggccctg
ctctttgccatccacagctacaagccagcccccttcttcgtcctggatgagatcgatgct
gccttggataacaccaacattggcaaggtggcaaattatatcaaggagcagtcgacttgc
aacttccaggccatcgtcatctctctcaaggaggagttctacaccaaggctgagagcctc
attggagtctatcctgagcaaggggactgtgtgatcagcaaagtcctgaccttcgacctc
accaagtacccagatgccaaccccaaccccaatgagcagtag
DBGET
integrated database retrieval system
