Spermophilus citellus (European ground squirrel): 308640825
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Entry
308640825 CDS
T11988
Symbol
TSG101
Name
(RefSeq) tumor susceptibility gene 101 protein isoform 2
KO
K12183
ESCRT-I complex subunit TSG101
Organism
scil Spermophilus citellus (European ground squirrel)
Pathway
scil03250
Viral life cycle - HIV-1
scil03272
Virion - Hepatitis viruses
scil04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
scil00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
308640825 (TSG101)
03272 Virion - Hepatitis viruses
308640825 (TSG101)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
308640825 (TSG101)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
scil04131
]
308640825 (TSG101)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
scil04147
]
308640825 (TSG101)
Membrane trafficking [BR:
scil04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-I complex
308640825 (TSG101)
Exosome [BR:
scil04147
]
Exosomal proteins
Proteins found in most exosomes
308640825 (TSG101)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UEV
Vps23_core
HAUS1
DUF3450
Helical_needle
UQ_con
STB2_C
Tuftelin_like
SSNA1
SPC25_N
CC_Bre1
T4SS_LegC2C7
ANG-1
FapA
CEP135_N
Exonuc_VII_L
DUF7856
Prominin
ENTR1
Spc7
CCDC90-like
LEKR1
Phage_scaffold
CRWN_second_CC
DUF5685
Rv0250c
DUF6212
FlaC_arch
Motif
Other DBs
NCBI-GeneID:
308640825
NCBI-ProteinID:
XP_081134869
LinkDB
All DBs
Position
2:complement(211633446..211700213)
Genome browser
AA seq
422 aa
AA seq
DB search
MAVSESQLKKMVSKYKYRDLTVRETVNVITLYKDLKPVLDSYVFNDGSSRELMNLTGTIP
VPYRGNTYNIPICLWLLDTYPYNPPICFVKPTSSMTIKTGKHVDANGKIYLPYLHEWKHP
QSDLLGLIQVMIVVFGDEPPVFSRPTISASYPPYQATGPPNTCQVSGVLGDILRPHICMY
RFLPKTGIWASISSYMPGMPSGISAYPSGYPPNPSGYPGCPYPPGGPYPATTSAQYPSQP
PVTTVGPSRDGTISEDTIRASLISAVSDKLRWRMKEEMDRAQAELNALKRTEEDLKKGHQ
KLEEMVTRLDQEVAEVNKNIELLKKKDEELSSALEKMENQSENNDIDEVIIPTAPLYKQI
LNLYAEENAIEDTIFYLGEALRRGVIDLDVFLKHVRLLSRKQFQLRALMQKARKTAGLSD
LY
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgtcggagagccagctcaagaaaatggtgtccaagtacaaatacagagaccta
actgtacgtgaaactgtcaatgttattactctgtacaaagatctcaaacctgtattggat
tcatatgtttttaatgatggcagttccagggaattaatgaaccttactggaacaattcct
gtgccttatagaggtaatacatacaacattccaatatgcctgtggctgctggacacatac
ccatataatccccctatatgttttgttaaacctactagttcaatgactattaagacagga
aagcatgttgatgcaaatgggaaaatatatcttccttatctacatgaatggaaacatcca
cagtcagacttgttggggcttattcaggttatgattgtggtatttggagatgaaccacca
gtcttctctcgtcctactatttcagcatcctatccaccataccaagcaacagggccacca
aatacctgtcaagttagtggagttttgggagatattctgaggccccacatctgcatgtac
cgattcctaccaaagactggcatttgggcttccatttcctcctacatgccaggcatgcca
agtggaatctctgcctacccatctggataccctcccaatcccagtggttacccaggctgt
ccttatccacctggtggtccttaccctgccacaacaagtgcccagtacccttcccagcct
cctgtgaccacagttggtcccagcagagatggcacaatcagcgaggacaccattcgagcc
tctcttatctcagcagtcagtgacaaactgaggtggcgaatgaaagaggaaatggatcgc
gctcaggctgagctcaatgccttgaaacgaacagaggaagacctgaaaaaaggtcaccag
aaactggaagagatggtcacccgtttagatcaagaagtagctgaagttaacaaaaacata
gaacttttgaaaaagaaggatgaagaactcagttctgctctggagaaaatggaaaatcaa
tctgaaaataatgatattgatgaagttatcattcccacagccccactatataaacagatc
ctaaatctgtatgcagaggaaaatgctattgaagacactatcttttacctgggagaagcc
ttgagacgaggagtaatagatctggatgtcttcttaaagcatgtacgtctgctgtcccgt
aaacagttccagttgagggcactaatgcaaaaagcaagaaagactgctggtcttagtgac
ctctactga
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