Spermophilus citellus (European ground squirrel): 308640907
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Entry
308640907 CDS
T11988
Symbol
GCNT1
Name
(RefSeq) beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase isoform 1
KO
K00727
beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase [EC:
2.4.1.102
]
Organism
scil Spermophilus citellus (European ground squirrel)
Pathway
scil00512
Mucin type O-glycan biosynthesis
scil01100
Metabolic pathways
Module
scil_M00056
O-glycan biosynthesis, mucin type core
Brite
KEGG Orthology (KO) [BR:
scil00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00512 Mucin type O-glycan biosynthesis
308640907 (GCNT1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
scil01003
]
308640907 (GCNT1)
Enzymes [BR:
scil01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.102 beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase
308640907 (GCNT1)
Glycosyltransferases [BR:
scil01003
]
Glycan extension
O-Glycan
308640907 (GCNT1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Branch
Motif
Other DBs
NCBI-GeneID:
308640907
NCBI-ProteinID:
XP_081135025
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All DBs
Position
2:78362375..78394277
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AA seq
428 aa
AA seq
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MLRNLWRRRLFSCPTKYYFMILVFSLITFSVVRIHQKPEFVSVRHLELIGDNPSNNINCT
KILQGDANEIQKVKLEMLTVKFRKRPRWTPSDYINMTSDCPSFIKMRKYIVEPLSKEEES
FPIAYSIVVHHKIEMLDRLLRAIYMPQNFYCIHVDKKSEDSFIAAVMGIASCFSNVFVAS
QLENVVYASWSRVQADLNCMKDLYRMSANWKYLINLCGLDFPIKTNLEIVRKLKSFMGEN
NLETEKMPSNKEERWKKHHVVINGKLTNTGTVKVHPPLKTPLFSGSAYFVVSREYVRYVL
ENENIQKFMEWAQDTYSPDEYLWATIQRIPEVPGSLSLSHKYDLSDMQSVARFVKWQYFE
GDVAQGAPYPPCNGVHVRSVCVFGAGDLNWILRKHHFFANKFDLDVDLFAVQCLDEHLRH
KALEMLEH
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgctgaggaatttatggcggaggagacttttttcttgtcccactaaatactattttatg
attcttgttttttccctaataactttctctgttgtaaggattcatcagaagcctgaattt
gtaagtgtcagacacctggagcttattggagataatcctagtaataatattaattgtacc
aaaattttgcagggtgatgcaaatgaaatccagaaggtaaagcttgagatgctaacagtg
aaatttagaaaacgtcctcggtggacaccatctgactatataaacatgaccagtgactgc
ccttcattcattaagatgcgtaaatatattgtagaacctcttagtaaagaagaggaaagc
ttcccaattgcatactccatagtagttcatcacaaaattgaaatgcttgacaggctcctg
agggccatctatatgcctcagaatttctactgcattcatgtagacaaaaaatcagaagac
tcctttatagcagcggtaatgggcatcgcatcctgtttcagtaacgtatttgtggccagt
cagttggagaatgtagtttatgcatcctggagtcgggttcaggccgatctcaactgcatg
aaggacctttacagaatgagtgccaattggaagtacttgatcaatctttgtgggttagat
tttcctattaaaaccaacctggaaattgtcaggaagctcaagtcattcatgggtgaaaac
aacctggaaacggaaaagatgccatctaataaagaagaaaggtggaagaagcatcatgtg
gtcattaacggaaagttgactaatacggggactgtcaaagtgcatcctccactcaaaaca
cctctgttttcgggcagtgcctattttgtggtcagtagggagtacgtgaggtatgtgcta
gagaatgaaaacattcaaaagttcatggagtgggcacaagacacgtacagcccagatgag
tatctctgggccactattcagaggatccctgaggtcccaggctcgctgtccttaagccac
aagtatgacttgtctgacatgcagtcagttgccaggtttgtcaagtggcagtactttgaa
ggtgacgttgcccagggtgcaccttacccaccctgcaacggggtccatgtgcgctcagtg
tgtgttttcggagctggcgacttgaactggatactacgtaagcaccacttttttgccaat
aagtttgacctggacgttgatctctttgctgttcagtgtttggatgagcatctgaggcat
aaagccctggagatgttagaacactga
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