KEGG   Spermophilus citellus (European ground squirrel): 308643446
Entry
308643446         CDS       T11988                                 
Symbol
LOC308643446
Name
(RefSeq) tubulin beta-4B chain-like
  KO
K07375  tubulin beta
Organism
scil  Spermophilus citellus (European ground squirrel)
Pathway
scil04145  Phagocytosis
scil04517  IgSF CAM signaling
scil04540  Gap junction
scil04814  Motor proteins
scil05010  Alzheimer disease
scil05012  Parkinson disease
scil05014  Amyotrophic lateral sclerosis
scil05016  Huntington disease
scil05020  Prion disease
scil05022  Pathways of neurodegeneration - multiple diseases
scil05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:scil00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    308643446 (LOC308643446)
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagocytosis
    308643446 (LOC308643446)
  09144 Cellular community - eukaryotes
   04540 Gap junction
    308643446 (LOC308643446)
  09142 Cell motility
   04814 Motor proteins
    308643446 (LOC308643446)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    308643446 (LOC308643446)
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    308643446 (LOC308643446)
   05012 Parkinson disease
    308643446 (LOC308643446)
   05014 Amyotrophic lateral sclerosis
    308643446 (LOC308643446)
   05016 Huntington disease
    308643446 (LOC308643446)
   05020 Prion disease
    308643446 (LOC308643446)
   05022 Pathways of neurodegeneration - multiple diseases
    308643446 (LOC308643446)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:scil03036]
    308643446 (LOC308643446)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:scil04812]
    308643446 (LOC308643446)
   04147 Exosome [BR:scil04147]
    308643446 (LOC308643446)
Chromosome and associated proteins [BR:scil03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     308643446 (LOC308643446)
Cytoskeleton proteins [BR:scil04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    308643446 (LOC308643446)
Exosome [BR:scil04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   308643446 (LOC308643446)
  Exosomal proteins of colorectal cancer cells
   308643446 (LOC308643446)
  Exosomal proteins of bladder cancer cells
   308643446 (LOC308643446)
SSDB
Motif
Pfam: Tubulin Tubulin_C Misat_Tub_SegII Tubulin_3 Tubulin_2
Other DBs
NCBI-GeneID: 308643446
NCBI-ProteinID: XP_081139410
LinkDB
Position
3:<148168702..>148171774
AA seq 447 aa
MREIVLIQAGQCGNQIGAKFWEVISDEHGIDPTGSYHGDGDLQLDRINVYYNEAAGNKYV
PRAILVDLEPGTVDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSMLDVV
RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVV
EPYNATLSLHQLLENTDETFCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL
RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSMQYRALTVPELTQQMFDAKNMM
AACDPRHGRYLAVAAIFRGRMSMREVDEQMLNMQNKNSSYFVDWIPHNVKTAVCDIPPRG
LKMSATFIGNNTAIQELFQRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVA
EYQQYQDATAEEQGEFDEEEEEEVEEA
NT seq 1344 nt   +upstreamnt  +downstreamnt
atgcgtgaaatcgtgctcatccaggcaggccaatgcggcaaccagatcggcgccaagttt
tgggaggtcatcagtgatgaacatggcattgaccccacaggcagttatcatggagatggt
gacttacagctggacagaatcaatgtgtactacaatgaagcagctggcaataaatatgtt
cctcgggccatcctagtggacctggagccaggaacggtagactcggtgagatcgggacca
tttggccagatattcaggccagacaactttgtgtttggccagagtggtgcagggaataac
tgggccaagggccactacacagagggagccgagctggtggactctatgctggatgtggtg
agaaaggaggcggagagctgtgactgtctgcagggcttccaactgacccactcgctgggg
ggcggcactggctcgggcatgggcaccctgctcatcagcaagatccgggaggagtaccca
gaccgcatcatgaacaccttcagcgtcgtgccttcacctaaggtgtcagacacggtggtg
gagccctataacgccaccctgtctctccaccagctgctggaaaacacggatgaaaccttt
tgcatcgacaacgaggccctgtacgacatctgtttccgcaccctaaagctgaccaccccc
acgtatggtgacctcaaccacctggtgtcagccaccatgagcggggtcaccacgtgcctg
cgcttcccgggccagctgaacgcagacctgcgcaagctggccgtgaacatggtgcccttc
ccccgcctgcacttcttcatgcctggcttcgcgcccctgaccagcaggggcagcatgcag
taccgcgccctgacggtgcccgagctcacccagcagatgttcgacgccaagaacatgatg
gccgcgtgtgacccccgccacggccgctacctggcagtggctgccatcttccgaggccgc
atgtccatgagggaggtggacgagcagatgctcaacatgcagaacaagaacagcagctac
ttcgtggactggatcccccacaacgtgaagacggccgtgtgcgacatcccaccgcggggc
ctcaagatgtcagccaccttcattggcaacaacacagccatccaggagctcttccagcgc
atctctgagcagttcactgccatgttccggcgcaaggccttcctgcactggtacacaggc
gagggcatggacgagatggagttcactgaggctgagagcaacatgaacgacctggtggct
gagtaccagcagtaccaggatgccactgctgaggaacagggagagttcgacgaggaggaa
gaggaagaggtcgaggaggcttag

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