Spermophilus citellus (European ground squirrel): 308643464
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Entry
308643464 CDS
T11988
Symbol
LAMB4
Name
(RefSeq) laminin subunit beta-4
KO
K06245
laminin, beta 4
Organism
scil Spermophilus citellus (European ground squirrel)
Pathway
scil04151
PI3K-Akt signaling pathway
scil04510
Focal adhesion
scil04512
ECM-receptor interaction
scil04518
Integrin signaling
scil05145
Toxoplasmosis
scil05146
Amoebiasis
scil05165
Human papillomavirus infection
scil05200
Pathways in cancer
scil05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
scil00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
308643464 (LAMB4)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
308643464 (LAMB4)
04518 Integrin signaling
308643464 (LAMB4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
308643464 (LAMB4)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
308643464 (LAMB4)
09162 Cancer: specific types
05222 Small cell lung cancer
308643464 (LAMB4)
09172 Infectious disease: viral
05165 Human papillomavirus infection
308643464 (LAMB4)
09174 Infectious disease: parasitic
05146 Amoebiasis
308643464 (LAMB4)
05145 Toxoplasmosis
308643464 (LAMB4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_laminin
Laminin_N
EGF_LMN_ATRN
LAMININ_IV_B
LAMB4
LAMB1
Motif
Other DBs
NCBI-GeneID:
308643464
NCBI-ProteinID:
XP_081139426
LinkDB
All DBs
Position
3:complement(176903806..>176998506)
Genome browser
AA seq
1766 aa
AA seq
DB search
MQIRLTLFLHLGWLICSKAQDKCDQGACRPTPGNLLLGRSTQLTASSTCGLNGAQKYCIL
SYLEGEQKCFVCDSRFPYDPYSQPNSHTIENVITSFEPDRGKKWWQSENGLDHVSIRLDL
EALFQFSHLILTFKTFRPAAMLVERSTDFGHSWKVLRYFAKDCAASFPDVTSGQAQGVGD
LVCDSKYSDIEPSTGGEVVLKVLDPSFEIENPYSPYIQDLVTLTNLRINFTKLHTLGDTF
LGRKQNDSLDKYYYALYEMVLRGSCFCNGHATECGPSQKERGDTFSSPGMVHGRCVCQHN
TDGPNCERCKDFFQDAPWRPAIGSQDSACRSCSCNGHSDRCHFDLAMYLASGGLSGGVCE
DCQHHTEGQHCDRCRPLFYKDPLKAISDPDACLPCECDPDGTISGGICVSHLDAAMGTVA
GQCLCKENVEGVNCDRCKPNHYGLSASDPLGCQPCNCNPLGSLPFETCDVDTGRCLCQAY
VTGPHCEQCIVGYWGLGDQRPGCSPCDCDIGGAYSNMCSPKDGQCECRPHVTGRSCNEPA
PGYFFAPLNFYLYEAEEAIPLQGLVPLGKIVTFLLVTFGQVPAVHIVFRELVPGNPVTWT
GPGFARVLPGAGLRFAVNNIPFPMDYIIAVRYETQSADDWAIQVMFNPSGESKYCTHKTL
RQEPQSFILSAAARIMLLPTPICLEPDVQYSIDVYFFQPLESHTHSHILVDSLGLIPQIN
SWEDFCSKKDMDEYQLHNCVEIASEVGPQVLSGACERLVASMSAKLHNGAVACKCHPQGA
VGSSCSPLGGQCQCKPHVVGRCCDRCSTGSYGLGHHGCHSCHCHPQGSKNTVCDQITGQC
PCHKEVTGRRCDQCLAGYFGFPNCRPCHCNGFAELCDSETGSCFNCGGFTTGGNCERCID
GYYGNPSLGQSCRPCLCPDAPSSNQYFAHSCYQSPWMSDVICNCLQGYAGVQCGECAPGF
YGNPSVSGAPCQPCACNNNIDVTDPESCNRVTGECLRCLHNTQGTNCQLCKPGHFGSALN
QTCRRCFCHPSGVSPTVCPPGEEACLCDPITGACPCLPNVTGLACDRCADGHWNLVPGRG
CQSCDCDHQTSQSSHCDQLTGQCLCKLGYGGKHCSECQENYYGDPFGQCLPCDCNIEGTQ
KPICDPDTGMCHCREGVSGQRCDRCARGHGQEFPTCLRCHLCFDQWDQAISSLSKAVQGL
IKLAANMEDKRETLPVCEVDFKGLRENMSEIERILKHPVLSSEEFLKVKDYHDSVRKQIT
HLNEQLKTVYKFQDLTETIVRMRNETDHLLENVQEKIDLQSSILNASTEDSLENIKKYYH
ISSSAEKKTNETGSIINNSVNTRTSLLTILDTLTSKENLSLEKLKQIKIPDIQILNEKVC
GEPGNLSCDFSSCGGALCKDSEGHRRCGGPNCHGSLTLSSNALQKAQDAESVVQNLNNQS
QGLKNQIKNISKLAEVSKNNVLQLNEKLANMKNQSEFEEEKLNLLIKKVKNFLLEENVPP
EDIEKVANRVLEIHLPITSQNLTHEFDKVQKLMQLGEDYRTEKNKLKKAAHGAQKLLVKA
KAAEKAAAVLLNLDKTLNKLQQVQITQGQANSTITQLAAKITKIKKNVLQAENQAKEMKN
KQLDLAKQLSEQEDGFSLLRTKWQKNQEQAGRAKVQAESARRHAGGAEKEFLELKKQYTL
LQHERRASGLTKETIRRVKQLKDAAEKLAGDTEDKMKRITDLEKKIQDLNLSRQEKADQL
KQLEEQVVAIKNEIVEQENKYATCYS
NT seq
5301 nt
NT seq
+upstream
nt +downstream
nt
atgcaaattcgactgaccctgtttttacaccttgggtggctcatttgctcgaaagctcaa
gacaaatgtgaccagggtgcctgccgtcctacccctggcaatctcctgttaggccgcagc
acgcaacttactgcatcttctacctgtgggctgaatggagcccagaaatactgcatcctc
agctacctggagggggaacaaaaatgtttcgtgtgtgactcccgatttccctatgaccca
tattcccagcctaacagtcacaccattgagaatgtaatcacaagttttgaaccagacaga
ggaaagaaatggtggcaatctgagaatggccttgatcacgtcagcatcagattggaccta
gaggcgctatttcagttcagccaccttatactgacctttaagacttttcggcctgctgca
atgttagtggaacgatccacagacttcggacactcctggaaagtgctcagatattttgca
aaagactgtgctgcctcctttcctgatgtcacatctggtcaggcccagggagtgggagac
cttgtttgtgactccaaatattcagatattgaaccctcaactggtggcgaggttgtttta
aaagttttggatcccagctttgaaatagagaacccttacagcccctacatccaggatctt
gtaacattaacaaacctgaggataaactttaccaaactccatacacttggggatactttc
ctgggaaggaagcaaaatgattcccttgataaatactactatgccctgtatgagatggtt
cttcggggaagctgtttttgcaatggccatgccactgaatgtggtccttcacagaaagaa
cggggagacacttttagctccccaggaatggttcatggtcggtgcgtctgtcagcacaac
acagatggcccaaactgtgagagatgcaaagacttcttccaggatgctccatggagacca
gccataggctctcaggacagtgcatgcagatcatgtagctgtaatggccactctgaccgc
tgtcatttcgatctggccatgtacctggcgagcggcggcctcagcgggggcgtgtgcgag
gactgccagcaccacaccgagggccagcactgcgaccgctgcagaccccttttctacaag
gaccccctcaaggccatctcagatcctgacgcatgcctgccttgtgaatgtgatcctgat
ggaaccatatctggtggcatttgtgtgagccaccttgatgctgccatggggactgtggcc
ggccagtgcctgtgtaaggagaacgtggaaggagtcaactgcgaccggtgcaaacccaat
cactatggactaagtgcctctgaccccctgggctgtcagccctgcaactgcaaccccctt
gggagtctgccatttgagacttgtgatgtagatacaggtcgatgcttatgccaggcctat
gtcaccggaccacactgcgaacagtgcattgttggctactggggactgggagatcaacgc
cctggatgttctccctgtgactgtgatattggaggtgcttattccaacatgtgctcaccc
aaggatggacagtgtgaatgccgcccacacgtcactggccgcagctgcaatgaacctgcc
ccaggctacttctttgcccctttgaatttctatctctatgaggcagaggaagccatacca
ctccaaggactcgtgcctttgggaaagatagttacattcctcttggtaacttttggccag
gtgcctgcagttcacattgttttccgagagcttgttcctgggaaccccgttacatggact
ggacctggatttgccagagttctccctggagctggcttgagatttgctgtcaacaacatt
ccttttcccatggactatatcattgctgttcgctatgaaactcagtctgcagatgactgg
gccatccaggtcatgtttaacccttctggggagagcaagtactgcacacacaagactcta
cggcaggagcctcagtctttcatcttatcagcagctgccagaatcatgctgcttcccaca
cccatctgtttagaaccagatgtacagtattccatcgacgtctatttttttcaacctttg
gagtcccacactcattctcacatcctggttgattctcttggccttattcctcaaatcaat
tcatgggaggatttctgcagcaagaaagacatggatgagtatcagctgcacaattgtgtt
gaaattgcctcggaagtgggacctcaagtgctctctggtgcttgtgaaaggctcgtggcc
agcatgtctgccaagctacacaatggggcagtggcctgcaagtgtcacccccagggtgca
gtcggatccagctgcagcccacttggaggccagtgccagtgtaaacctcatgtggttggg
cgctgctgcgacaggtgctcaactggaagctacggtttgggacatcatggctgtcactca
tgtcactgccatcctcagggttcgaagaacacggtctgtgaccaaataaccggtcagtgc
ccctgccacaaagaggtgactggccgccgttgtgatcagtgcctggcaggctacttcggg
tttcccaactgccgtccttgccattgtaatgggtttgctgaactttgtgattcagagaca
gggtcgtgcttcaattgtggaggtttcacaaccggaggaaactgtgaaaggtgcatcgat
ggttactatggaaatccgtctttaggacagtcttgtcgtccttgcctgtgtccagatgct
ccctcaagcaatcagtattttgcccattcctgttatcagagtccttggatgtcagatgta
atctgcaattgtcttcaaggttatgcaggtgttcagtgtggagaatgcgctcctggtttc
tatggtaatccaagtgtttcgggagcaccttgccagccatgtgcctgcaacaacaacata
gatgtaactgatccagagtcctgcaaccgggtaacaggggagtgccttcgatgtctgcat
aatactcagggtacaaattgccagctctgcaaaccaggtcactttggatcagccctcaat
cagacctgcagaagatgcttctgccacccttctggagtcagtcccactgtgtgtccccct
ggtgaggaagcttgcctttgtgaccccatcactggtgcatgcccttgtctaccaaatgtc
acaggcctggcttgtgaccgttgtgctgatggacactggaatcttgtccctggcagggga
tgtcagtcatgtgactgtgaccaccagacctctcaaagcagccactgtgaccagcttaca
ggccaatgtctgtgcaaactgggctatggtgggaaacactgtagtgagtgccaggaaaat
tattatggagacccattcggccaatgccttccatgtgactgcaacatagaaggaacccag
aagcctatctgtgacccagacacaggcatgtgccactgccgggagggtgtcagcggccag
cgatgtgaccgctgtgcccggggtcatggtcaggaattccctacttgtcttcgatgtcac
ttgtgttttgatcaatgggaccaggccatttcttccctctccaaagcagtgcaagggtta
attaagctggctgctaacatggaagataaaagagagaccctgccggtctgtgaggtcgac
ttcaaaggcctcagagagaacatgtctgaaatagagaggattttgaaacatcctgttctc
tcatctgaggaattcttaaaagtcaaggattatcatgactctgttagaaaacaaatcacg
catctaaatgaacaattgaaaacggtgtacaaattccaagatctgacagaaaccatagta
aggatgaggaatgaaacagaccacttgcttgaaaacgttcaggagaaaattgatttgcaa
tctagcattcttaatgcaagcactgaagattccttagaaaatatcaagaagtattaccac
atatcatcatctgctgaaaagaaaactaatgaaactggttccatcataaataactctgta
aacaccaggaccagcttgcttaccattttagatacactgacctcaaaagaaaacttgtca
ttggaaaagttaaagcagattaagataccagatatccaaatattgaatgagaaggtgtgt
ggagaacctgggaacttgtcatgtgatttctcatcctgtgggggagctctctgcaaggac
tctgagggacacaggcggtgtggtggtcccaactgtcatggctctctgaccctctcaagc
aatgccctccaaaaagcccaggatgcagaatctgtggttcaaaatttgaataatcagtct
caagggttgaagaatcagatcaaaaatataagtaaactggcagaagtctccaaaaacaat
gtcttgcagctaaatgagaaactggcaaatatgaaaaaccaaagtgaatttgaagaagaa
aaactgaatcttttaatcaaaaaagtgaagaactttttgttagaggaaaatgtgcctcca
gaagacatagagaaggttgcaaatcgtgtgcttgaaatccacctaccaataacatcacaa
aatctaacccatgaatttgacaaagtacagaaacttatgcaacttggtgaggactacagg
acagaaaagaacaagcttaaaaaagcagcacatggagcccaaaagcttttggtgaaggcc
aaagcagctgagaaagcagcagctgtcttgttaaaccttgacaaaacattgaataagttg
caacaagttcaaatcactcaaggacaggcaaactctactattactcagctggctgccaag
ataacaaaaataaaaaagaatgtactgcaggctgaaaatcaagccaaggaaatgaagaat
aagcagctggacttagcaaagcagctgtcagagcaggaggatggattctccctgctgcgg
accaagtggcaaaagaaccaagaacaagcgggcagggcaaaagttcaggctgaatctgcc
cgtcgccatgctgggggtgctgagaaggagtttcttgagctgaaaaaacagtacaccctt
cttcaacatgagaggagggcttcaggactgacaaaggaaacgatccgaagagtcaaacag
ctaaaagatgccgccgagaaattggctggggatacagaggacaagatgaaaagaataaca
gatttagagaagaagatccaagatttgaatctaagtagacaagaaaaagctgatcaactg
aaacaattagaagagcaagttgttgccattaaaaatgaaattgttgagcaggaaaataaa
tatgccacctgctatagttag
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