Spermophilus citellus (European ground squirrel): 308644159
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Entry
308644159 CDS
T11988
Symbol
MED13L
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 13-like isoform 1
KO
K15164
mediator of RNA polymerase II transcription subunit 13
Organism
scil
Spermophilus citellus (European ground squirrel)
Pathway
scil04919
Thyroid hormone signaling pathway
Brite
KEGG Orthology (KO) [BR:
scil00001
]
09150 Organismal Systems
09152 Endocrine system
04919 Thyroid hormone signaling pathway
308644159 (MED13L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
scil03021
]
308644159 (MED13L)
Transcription machinery [BR:
scil03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
308644159 (MED13L)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Med13_C
MID_MedPIWI
Med13_N
Motif
Other DBs
NCBI-GeneID:
308644159
NCBI-ProteinID:
XP_081141077
LinkDB
All DBs
Position
3:complement(85198056..85501744)
Genome browser
AA seq
2213 aa
AA seq
DB search
MTAAANWVANGASLEDCHSNLFSLAELTGIKWRRYNFGGHGDCGPIISAPAQDDPILLSF
IRCLQANLLCVWRRDVKPDCKELWIFWWGDEPNLVGVIHHELQVVEEGLWENGLSYECRT
LLFKAIHNLLERCLMDKNFVRIGKWFVRPYEKDEKPVNKSEHLSCAFTFFLHGESNVCTS
VEIAQHQPIYLISEEHIHMAQSSPAPFQVLVSPYGLNGTLTGQAYKMSDPATRKLIEEWQ
YFYPMVLKKKEELKEEEELGYDDDFPVAVEVIVGGVRMVYPSAFVLISQNDIPVPQSIAT
AGGHITVGQPGLGSVKDPSNCGMPLTPPTSPEQAITGESGVMQSATSHLGSQDGGMVTMH
SPKRSGKIPPKLHNHMVHRVWKECILNRTQSKRSQMSTPTLEEEPANNPATWDFVDPTQR
VSCSCSRHKLLKRCAVGPSRPPTMSQPGFSAGPSSSSSLPPPASSKHKTTERQEKGDKLQ
KRPLIPFHHRPSVAEELCMEQDTPGQKLGLAGMDSSLEVSSSRKYDKQMAVPSRNTSKQM
NLNPMDSPHSPISPLPPTLSPQPRGQETESLDPPSVPVNPALYGNGLELQQLSTLDDRTV
LVGQRLPLMAEVSETALYCGIRPSNPESSDKWWHSFRLPASDDAEFRPPELQGERCDAKM
EVNSESTALQRLLAQPNKRFKIWQDKQPQMQSLHFLDPLPLSQQPGDSLGEVNDPYTFED
GDIKYIFTANKKCKQGTEKDSLKKNKSEDGFGTKDVTTPGHSTPVPDGKNAMSIFSSATK
TDVRQDNAAGRAGSSSLTQVTDLAPSLHDLDNIFDNSDDDELGAVSPALRSSKMPTVGME
DRPLGKDGRAAVPYPPTVADLQRMFPTPPSLEQHPAFSPVMNYKDGISSETVSALGMMES
PMVSMVSTHLTEFKMEVEDGLGSPKPEEIKDFSYVHRVPPFQPFVGSSMFAPLKMLPSHC
LLPLKIPDACLFRPSWAIPPKIEQLPMPPAATFIRDGYNNVPSVGSLADPDYLNTPQMNT
PVTLNSAAPASNSGAGVLPSPATPRFSVPTPRTPRTPRTPRGGGTASGQGSVKYDSTDQG
SPASTPSTTRPLNSVEPATMQPIPEAHSLYVTLILSDSVMNIFKDRNFDSCCICACNMNI
KGADVGLYIPDSSNEDQYRCTCGFSAIMNRKLGYNSGLFLEDELDIFGKNSDIGQAAERR
LMMCQTTFLPQMEGARKSQETPISLLLLLQNQHTQPFASLSFLDYISSNSRQTLPCVSWS
YDRVQADNNDYWTECFNALEQGRQYVDNPTGGKVDEALVRSATVHSWPHSNVLDISMLSS
QDVVRMLLSLQPFLQDAIQKKRTGRTWENIQHVQGPLTWQQFHKMAGRGTYGSEESPEPL
PIPTLLVGYDKDFLTISPFSLPFWERLLLDPYGGHRDVAYIVVCPENEALLEGAKTFFRD
LSAVYEMCRLGQHKPICKVLRDGIMRVGKTVAQKLTDELVSEWFNQPWSSEENDNHSRLK
LYAQVCRHHLAPYLATLQLDSSLLIPPKYQTPPAATQGQAPPGNAGPLASNSGSAAPPAG
SAFNPTSNGGSTNPPTSSSTSGSSVSQVSSSASAPGINQMSTTSSSGLSGSVGGQNPSVG
GSATDRTQGNMGCGGDTELGQNSSQPVQDGQESVTERERIGIPTEPDSADSQAYPPAVVI
YMVDPFTYTAEEDSTSGNFWLLSLMRCYTEMLDNLPEHMRNSFILQIVPCQYMLQTVKDE
QVFYIQYLKSMAFSVYCQCRRPLPTQIHIKSLTGFGPAASIEMTLKNPERPSPIQLYSPP
FILAPIKDKSKQTELGENFGEASQKYNVLFVGYCLSHDQRWLLASCTDLHGELLETCVVN
IALPNRSRKSKVSARKIGLQKLWEWCIGIVQMTSLPWRVVIGRLGRLGHGELKDWSILLG
ECSLQTISKQLKDVCRMCGISAADSPSILSACLVAMEPQGSFVVMPDAVTMGSVFGRSTA
LNMQSSQLNTPQDASCTHILVFPTSSTIQVAPANYPNEDGFSPNNDDMFVDLPFPDDMDN
DIGILMTGNLHSSPNSSPVPSPGSPSGIGVGSHFQHSRSQGERLLSREAPEELKQQPLAL
GYFVSTAKAENLPQWFWSSCPQAQNQCPLFLKASLHHHISVAQSDELLPARNSQRVPHPL
DSKTTSDVLRFVLEQYNALSWLTCNPATQDRTSCLPVHFVVLTQLYNAIMNIL
NT seq
6642 nt
NT seq
+upstream
nt +downstream
nt
atgactgcggcagcgaactgggtggcgaacggggcgagcttggaggattgtcactccaac
ctcttctcgctggctgaactcacaggaatcaaatggcgtaggtacaattttggagggcat
ggggactgtggacccataatttcagccccagcccaagatgatccaatcttgttaagtttc
atccgctgcctgcaagccaacctgttgtgtgtatggcgtcgtgacgtcaaaccagattgc
aaagaattatggatattctggtggggagatgaacccaaccttgtgggtgtaatacatcat
gaactgcaggttgtggaagaaggactctgggaaaatggcctttcctatgaatgtaggacg
ctgctcttcaaggcgatccacaatctcttagaaaggtgcctaatggacaagaacttcgtt
aggattgggaagtggtttgttcgaccctatgagaaggacgaaaagccagtcaacaaaagt
gaacatttgtcctgtgcatttacattttttcttcatggagaaagtaatgtatgcacaagt
gtggagattgcccaacatcagccaatttatttgatcagtgaagaacatatacacatggct
cagtcttcacctgcaccatttcaagtactggtgagtccatatggcttaaatggcacgcta
acaggccaagcatataaaatgtcagacccagccacccgcaaattgattgaggaatggcaa
tatttctacccgatggtgctaaaaaagaaagaggaattgaaagaagaggaagagttggga
tatgatgatgatttccccgtggcagtcgaagtaattgttggtggtgttcggatggtctac
ccttcagcttttgtattgatctctcagaatgacatcccagttcctcagagtattgccact
gctggaggccatattacagttgggcagccggggcttggtagtgtgaaggacccaagtaac
tgtgggatgcctctgacccctcccacctctccagagcaggccatcacaggagagagtgga
gttatgcagagtgctacaagtcacctgggttcccaagatggggggatggtaactatgcac
agtccaaagagatcggggaagattcctccaaaactccacaatcatatggttcatcgagtc
tggaaggaatgcatcctcaacagaacccagtccaagaggagccaaatgtcaactccaact
cttgaagaagagcctgctaacaatcctgctacctgggattttgtggatccaacccaaaga
gtcagctgttcttgttccaggcataaacttttaaaacggtgtgcagtaggacccagtcga
cctcccacaatgtctcaaccagggttcagtgcaggaccatcatcatcttcatctttacca
cctcctgcttcttctaagcacaaaacaacagaaagacaagaaaaaggagacaagttgcaa
aagagacccttgataccctttcatcatcggccgtctgtggctgaagagttatgcatggaa
caggatacaccgggacaaaagctagggttggcagggatggactcctccttagaggtgtct
agcagtcggaagtatgataagcaaatggccgtgccttccagaaatacaagcaagcaaatg
aatctgaatcctatggattcacctcattcccctatttcccctctgccaccaacactcagc
cctcagccacgaggtcaggaaacagaaagtttggacccaccgtctgtccctgtgaatcca
gccctctatggaaatgggctagaacttcagcagttgtctactttagatgacagaactgtc
ctcgtaggccaaagactgcctctgatggcagaggtcagcgagacggccttatattgtggg
attaggccctcaaacccagagtcatcagataaatggtggcatagttttcgtctcccagcc
agcgatgatgctgagttcaggcctccagagctccagggtgagagatgtgatgccaaaatg
gaggtgaactcagagagcactgcactgcaaagactcttagcacaacctaacaaacggttt
aaaatctggcaagacaagcagccccagatgcagtcactccacttccttgacccgttgcct
ctgtcacagcaacctggagacagtttgggagaagtcaatgacccatatacctttgaagat
ggcgacataaaatacatcttcacagcaaataagaaatgcaaacaagggacagaaaaggat
tccctgaaaaagaataagtcagaggatggatttggtaccaaggatgtcactacaccaggt
cattccacgccggtgcctgatgggaaaaatgccatgtctattttcagttctgctactaaa
acagatgtccggcaggataatgcagctggcagagctggctccagtagccttacgcaggtg
acagatttggcaccttccctgcatgacttagacaacatctttgataattctgatgatgac
gaacttggggctgtatcacctgcactgcgctcatcaaaaatgcctacggttgggatggaa
gaccgacctcttgggaaggatggaagagctgctgttccatacccaccaacagttgcagac
ttgcaaaggatgttccccacccctccatctttggaacagcatcctgcattttctcctgtg
atgaattataaagatgggatcagttcagagacagtgtcagcattaggcatgatggagagt
cctatggtcagtatggtttcaacacacctcacagaattcaaaatggaagtagaagatgga
ttaggaagtcccaaaccagaggaaataaaggacttttcatatgtgcacagagttccaccc
tttcagccttttgtgggatcttccatgtttgctccactgaagatgttgccgagccattgc
ctgctacctctgaagatacctgatgcctgtctgtttcggccttcgtgggcaattcctcct
aaaattgaacaactgcccatgccccctgcagccactttcattagggatggctacaataat
gtgcctagtgttgggagcctagcagatccagactatctgaacacaccacagatgaacacg
ccggtgacgctgaacagcgctgccccagccagcaacagtggggcaggagtcctcccatct
ccagcgacccctcgcttttcagtccccacaccacgaacccccagaaccccaagaactccc
agaggtgggggcactgccagtggtcaagggtctgttaaatatgacagcactgatcagggg
tcaccagcctctaccccctctaccacacggccccttaactctgtggagcctgccaccatg
cagccaattcctgaggcccacagtctttatgtcaccctgattctctcagattctgtgatg
aatatctttaaagacagaaactttgacagctgttgcatctgtgcctgcaacatgaacatc
aaaggggcagatgttgggctctacatccccgattcttccaatgaggaccagtaccgctgc
acctgtgggtttagtgcgattatgaaccgcaaacttggctacaattcgggactcttcctt
gaagatgagttggatatttttgggaagaattctgatattggtcaggctgcagagaggcgc
ttaatgatgtgtcagaccacctttcttcctcagatggagggagccagaaaatcccaggag
acacccataagccttcttcttctccttcagaatcaacatacacaaccttttgcttctctg
agtttcctggactatatttcctctaacagtcgccaaactcttccctgtgtaagctggagt
tatgaccgggtacaggcagacaacaatgattactggacagagtgctttaatgcgctggag
cagggacggcagtatgtggataatcccactggtgggaaagtggatgaagctctggtgaga
agtgccactgtgcactcttggcctcatagcaatgtgctagacatcagcatgctctcctct
caggatgtggtccgcatgctgttgtccctgcagccctttctccaagatgccatccaaaag
aagcgcacgggcaggacctgggagaacattcagcacgtgcagggaccactcacctggcag
cagttccataagatggcgggacgtggaacctacggttcagaagaatctcctgagccgtta
cccatccctaccctgctggtaggctatgacaaggacttcctgaccatctcgccattctcc
ttgcccttttgggaaaggctgttgttggacccatatgggggccaccgtgatgttgcctat
attgtggtgtgtccagaaaatgaggccttgctcgaaggagccaaaactttcttcagggac
ttgagtgctgtatatgagatgtgtaggcttgggcagcacaagcccatctgcaaagtgcta
cgtgatggcatcatgcgtgtgggcaagaccgtggcacagaagctgacagatgagcttgtg
agcgaatggtttaaccagccttggagcagtgaggagaatgacaatcattccagactcaaa
ctttatgcgcaagtttgccgccatcacctagcaccttatttagccactctgcagctggac
agcagcctgttgataccacctaaataccagaccccaccagcagcaacacagggacaagct
ccgcctgggaatgctgggcctttagcttcaaattcaggatcagcagctcccccagctggc
agtgcattcaatcccacctctaatggtggttctacaaaccccccaacaagtagttccaca
tctggatcctccgtgtcccaggtctcgtcatctgcttctgctccgggtattaaccagatg
agcactacctcttcctcaggactcagcggtagtgttggagggcagaaccccagtgttggg
ggcagtgccacggacagaacccaagggaacatgggctgtggtggagacactgagcttggg
cagaactcctcccagcctgtgcaggatggacaagaaagtgttacagaaagggagagaata
ggaattcccacggagcctgactctgcagacagccaagcctaccctcctgctgttgtgatt
tacatggtggacccattcacctacactgcagaggaagactccacttctggaaacttctgg
ctcttgagcttgatgcgctgctacacagaaatgctggataatttacctgagcatatgaga
aattctttcattctccagattgtgccttgccagtacatgctgcagacagtgaaggatgaa
caagttttctacattcaatacttgaagtccatggcattttcagtgtactgccagtgcagg
cgacctctgcctacacagatccacattaaatccctcacaggatttgggcctgcagccagc
attgagatgaccctcaagaaccctgagcggcccagcccaatccagctttactcccctccc
tttatattggccccaatcaaagacaaatcaaagcagacagagctgggagagaactttggt
gaggccagccagaagtacaatgtgctctttgtgggctattgtctatcccatgaccagcgg
tggctcttggcttcctgcactgacctccatggggagttattagagacctgcgttgtgaat
attgctttaccaaacaggtcacggaagagtaaagtatctgcacgtaagattggactgcag
aaactgtgggaatggtgcataggcattgtgcaaatgacatcgctgccctggagagttgtg
attggaagacttgggcgccttggccatggggagcttaaagattggagtatcctccttgga
gaatgttcactacagacaatcagcaaacagctcaaggatgtgtgccggatgtgtggaatc
tctgccgcagactctccttctatccttagtgcctgcctggttgccatggagccccagggg
tcctttgtagtgatgccagatgctgtcacaatgggctctgtttttggccgaagtactgca
ctgaacatgcagtcttctcagctgaatacccctcaagatgcatcttgtacacacatcttg
gtgttcccaacatcatcaaccatccaggtggctccagcaaactatcccaacgaggatggg
ttcagccctaacaatgatgatatgtttgttgaccttccattcccagatgatatggacaat
gacattggcatattaatgactgggaacctccattcctctcccaactcctccccagttccc
tccccaggctctccttctggaattggtgtgggctctcacttccagcacagtcggagccag
ggtgagcgtcttctctcgagagaggcaccagaggagctcaagcagcagcccttggccctt
gggtattttgtgtcaactgccaaagctgagaatctcccccagtggttttggtcatcatgt
ccccaggctcagaaccagtgccctctcttcctaaaggcttcactacatcaccatatctct
gtagcacagtcggacgaacttctccctgccaggaattctcaacgcgttccacaccctctg
gactccaagaccacatctgatgttttaaggtttgttttggagcagtacaacgcactgtcc
tggctcacgtgcaatccagccacccaggaccgtacttcctgccttcccgtccactttgtg
gtgctcactcagttgtacaatgccatcatgaatatactttaa
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integrated database retrieval system
