Spermophilus citellus (European ground squirrel): 308644989
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Entry
308644989 CDS
T11988
Symbol
LOC308644989
Name
(RefSeq) E3 ubiquitin-protein ligase RNF115-like
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
scil Spermophilus citellus (European ground squirrel)
Brite
KEGG Orthology (KO) [BR:
scil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
scil04131
]
308644989 (LOC308644989)
04121 Ubiquitin system [BR:
scil04121
]
308644989 (LOC308644989)
Enzymes [BR:
scil01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
308644989 (LOC308644989)
Membrane trafficking [BR:
scil04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
308644989 (LOC308644989)
Ubiquitin system [BR:
scil04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
308644989 (LOC308644989)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4
zf-rbx1
Zn_ribbon_19
zf-C3HC4_3
zf-RING_5
zf-ANAPC11
DUF8608
HypA
zf-RING_16
C1_2
zf_RING_Vps8
DZR_2
zf-RING_6
zf-Nse
Rad50_zn_hook
FAR1_N
Motif
Other DBs
NCBI-GeneID:
308644989
NCBI-ProteinID:
XP_081142998
LinkDB
All DBs
Position
3:complement(61744701..61746260)
Genome browser
AA seq
306 aa
AA seq
DB search
MAEASAAGADAGAAVAAHRFFCHFCKGEVSPKLPEYICPRCESGFIEEVTDDSSFLGGGS
SRIDNSTSTRFAELWDHLDHTMFFQDFRPFLSSNPLDQDTRANERSHQTSTDFWGPSRPP
RLPVTRRHRSLGSTPPPGRSPTIEGIMQQIFAGFLANSAFPGSPHPFSWSGMLHSNPGDY
AWGQTGLDAIVTQLLGQLENTGPPPADKEKITSLPTVTVTPEQVDMGLECAVCKEDYTVE
EEVRQLPCNHLFHSSCIVPWLELHDTCPVCRKSLNGEDSTRQTQSSEASASNRFSNDSQL
HDRWTF
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggcctcggcggccggggcggacgcgggcgccgcggtggccgcgcaccggttt
ttctgccacttttgcaaaggcgaggtcagccccaaactgccggaatatatatgtcccaga
tgtgaatcaggctttattgaagaagtgacagatgattccagttttttaggtggtggcagc
agccggatagacaatagcacatcaactcgttttgcagagctctgggaccatttggatcac
acgatgtttttccaagattttagaccatttctaagtagcaatccactggaccaagatact
agagccaatgaaaggagtcaccagacttccactgacttctggggaccaagtaggcctcca
aggctgcccgttacccggagacacaggtctctaggaagcactcctcctcctggcaggtct
ccaactattgagggaataatgcaacagatctttgcaggattccttgcaaattctgcattt
ccaggatccccacaccctttttcttggagcgggatgctgcactccaaccctggggactat
gcctggggtcagacagggcttgatgccattgtaacccagcttttaggacagctggaaaac
acagggcctcccccagctgacaaggaaaaaatcacctctcttccaacagtgaccgtaact
ccggaacaagttgatatgggtttagaatgtgcagtttgcaaagaagattacacagttgaa
gaggaagtccgacagctaccctgcaatcacctctttcacagcagctgtattgtgccatgg
ttagaactgcatgacacatgtcctgtatgtaggaagagtctaaatggtgaggattctacg
cggcaaacccagagctctgaggcctctgcaagcaacagatttagcaatgacagccagctg
cacgatcgatggactttctga
DBGET
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