Spermophilus citellus (European ground squirrel): 308645323
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Entry
308645323 CDS
T11988
Symbol
MED16
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 16 isoform 1
KO
K15159
mediator of RNA polymerase II transcription subunit 16
Organism
scil
Spermophilus citellus (European ground squirrel)
Pathway
scil04919
Thyroid hormone signaling pathway
Brite
KEGG Orthology (KO) [BR:
scil00001
]
09150 Organismal Systems
09152 Endocrine system
04919 Thyroid hormone signaling pathway
308645323 (MED16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
scil03021
]
308645323 (MED16)
Transcription machinery [BR:
scil03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Tail
308645323 (MED16)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Med16_bridge
Med16_N
Med16_C
WD40
Beta-prop_IFT140_1st
Beta-prop_WDR3_1st
WD40_WDHD1_1st
ANAPC4_WD40
Beta-prop_THOC3
Beta-prop_IFT122_1st
Beta-prop_WDR35_TULP_N
WD40_CDC20-Fz
Beta-prop_WDR5
WD40_Prp19
Beta-prop_HPS5
Beta-prop_EML_2
DSE1_N
Beta-prop_RIG_2nd
Beta-prop_EML
ASA1
Motif
Other DBs
NCBI-GeneID:
308645323
NCBI-ProteinID:
XP_081143490
LinkDB
All DBs
Position
3:complement(541862..558692)
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AA seq
829 aa
AA seq
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MDLAYVCEWEKWPKSTHCPSVPLACAWSCRNLIAFTTDLRSDDQDLTRTIHILDTEHPWD
VHSVSSQHREAITCLEWDQSGSRLLSADADGQIKCWSMADHLANSWESCLGSMVEGDPIV
ALSWLHNGVKLALHVEKSGASSFGEKFSRVKFSPSLTLFGGKPMEGWIAVTVSGLVTVSL
LKPSGQVLTSTESLCRLRGRVALADIAFTGGGNIVVATADGSSASPVQFYKVCVSVVSEK
CRIDTEILPSLFMRCTTDLSRKDKFPAITHLKFLARDMSEQVLLCASSPTSSLVECWSLR
KEGLPVNNIFQQISPAVGDKQPMILKWRILSATNDLDRVSAVALPKLPISLTNTDLKVAS
DTQFYPGLGLALAFHDGSVHIVHRLSLQTMVVFYSSATPRSVDEPALKRPRTTGPAVHFK
AMQLSWTSLALVGIDNHGKLSMLRISPSMGHALEVSLALRHLLFLLEYCMVTGYDWWDIL
LHVQPGMVQSLVEKLHEEYTRQSAALQQVLSTRILAMKASLCRLSPCTVTRVCDYHTKLF
LMAVSSTLKSLLCPHFLNTPDKSPGDRLTEICAKITDVDIDKVMINLKTEEFVLDMNTLQ
ALQQLLQWVGDFVLYLLASLPNQGSPLRPGHSFLRDGTSLGMLRELMVVIRIWGLLKPSC
LPVYTATSDTQDSMSLLFRLLTKLWICCRDEGPSSEPDEALVDECCLLPSQLLVPSLDWL
PVSDGLVSRLQPKQPLRLYFGRAPTLPGSATTLQLDSLARAPGQPKMDHLRRLHLGAYPT
EECKACTRCGCVTMLRSPNKTTAVKQWEQRWIKNCLCGGLWWRTPPSCP
NT seq
2490 nt
NT seq
+upstream
nt +downstream
nt
atggacctggcctacgtctgtgagtgggagaagtggcccaagagcacccactgcccatca
gtgcccctggcctgtgcctggtcctgccgcaacctcattgccttcaccacggacctccgc
agcgatgaccaggacctgacccgcacgattcacatcctggacacagagcacccctgggat
gtgcactccgtcagctcccagcaccgtgaggccatcacctgcctggagtgggaccagtca
ggctcccggctcctctccgctgatgccgacgggcagatcaagtgctggagcatggcggac
cacttggccaacagctgggagagctgcctgggcagcatggtggagggggaccccatcgtg
gccctgtcctggctgcacaatggtgtgaagctggcgctgcacgtggagaagtcaggtgcc
tctagcttcggtgagaagttctcccgcgtcaagttctcgccgtcactcacgctgtttggc
ggcaagcccatggagggctggatcgcagtgaccgtcagcggcttggtcacagtgtccctg
ctcaaacccagcgggcaggtgttgacgtccaccgagagcctgtgccggctgcgtggccgc
gtggccctggctgacatcgccttcacgggtggtggcaacattgtggtagccaccgcggat
ggcagcagtgcctcgcccgtgcagttctacaaggtgtgcgtgagcgtcgtcagcgagaag
tgccgcattgacacagagatcctgccctcgctcttcatgcgctgcaccacagacctcagt
cgcaaggacaagttccccgccatcacccacctcaagttcctggcccgggacatgtccgag
caggtgctcctgtgtgcgtccagcccgacgagcagcctcgtggagtgctggtccttgcgc
aaggaggggctccccgtgaacaacatctttcagcagatctctcccgctgttggtgacaaa
cagcccatgatcctcaagtggcggatcctgtcagccaccaatgacctggaccgtgtgtcg
gctgtggcactgcccaagctgcccatctctctcaccaacactgacctcaaggtggccagc
gacacccagttctaccccggccttgggctggccttggccttccacgacggcagcgtccac
atagtgcaccgcctctcgctgcagaccatggtggtcttctatagctccgcgaccccgcgc
tctgtggacgagccggccctcaagcgccctcgcaccacaggccctgcagtgcacttcaag
gccatgcagctgtcctggacttcgctggccctcgtgggcatcgacaaccatgggaagcta
agcatgctgcgcatctcgccctccatgggccacgcactggaggtgtccctggccctgcgg
cacctgctgttcctgctcgagtactgcatggtgacgggctacgactggtgggacatcctg
ctgcacgtgcagcccggcatggtgcagagcctggtggagaagctgcacgaggagtacaca
cgccagagcgcagccctgcagcaggtgctctccacccggatcctggccatgaaggcctca
ctctgcaggctctcgccgtgtacggtgacacgcgtgtgcgactaccacacaaagcttttt
ctgatggctgtcagctccacgctcaagtctctgctgtgtccacatttcctcaacacccct
gataagagccctggcgaccggctaaccgagatctgtgccaagatcactgacgtcgacatc
gacaaggttatgatcaacctcaagactgaggagtttgtcctagacatgaacacgctgcag
gcgctgcagcagcttctgcagtgggtcggcgactttgtgctttatctcctggctagcctg
cccaaccagggctccccactgcggccaggccacagcttcctgcgggatggcacctcactg
ggcatgctgcgggagctgatggtggtcattcgcatctggggcctgctgaagcccagctgc
ctgcccgtgtacacagccacctcggacacccaggacagcatgtccctgctctttcgcctg
ctcaccaagctctggatctgttgccgagacgagggcccatctagcgagccagatgaggca
ctagtggacgagtgctgcctgctgcccagccagctgctggtccccagcctggactggctg
cccgtcagcgatggtctggtcagccgcctgcagcccaagcaacccctgcgcctgtacttc
ggcagggcacccacgctgccaggcagtgccaccactttgcagctagacagcctcgccaga
gcaccgggccagcctaagatggaccatctacggcggctgcacctgggcgcctaccccaca
gaggagtgcaaggcctgcaccaggtgcggctgcgtcacaatgctcaggtcccccaacaag
accacggcggtcaagcagtgggagcagcgctggatcaagaactgcctgtgtggggggctc
tggtggcggacaccccccagctgcccctga
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