Spermophilus citellus (European ground squirrel): 308645597
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Entry
308645597 CDS
T11988
Symbol
UFD1
Name
(RefSeq) ubiquitin recognition factor in ER-associated degradation protein 1 isoform 1
KO
K14016
ubiquitin fusion degradation protein 1
Organism
scil Spermophilus citellus (European ground squirrel)
Pathway
scil04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
scil00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
308645597 (UFD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
scil03009
]
308645597 (UFD1)
Ribosome biogenesis [BR:
scil03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
308645597 (UFD1)
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GFIT
Motif
Pfam:
UFD1_N1
UFD1_N2
CDC48_2
Motif
Other DBs
NCBI-GeneID:
308645597
NCBI-ProteinID:
XP_081143959
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All DBs
Position
3:72267577..72291403
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AA seq
364 aa
AA seq
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MDRTMAEMPSHPGLRPAGLPVPDTSGTSWTLNYECPCSSALAWGMVCVPSQLDLRSLKFS
FNMFDHPIPRVFQNRFSTQYRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITY
PMLFKLTNKNSDRMTHCGVLEFVADEGICYLPHWMMQNLLLEEGGLVQVESVNLQVATYS
KFQPQSPDFLDITNPKAVLENALRNFACLTTGDVIAINYNEKIYELRVMETKPDKAVSII
ECDMNVDFDAPLGYKEPERQVQHEESTEGEADHSGYAGELGFRAFSGSGNRLDGKKKGVE
PSPSPIKPGDIKRGIPNYEFKLGKITFIRNSRPLVKKVEEDEAGGRFVAFSGEGQSLRKK
GRKP
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atggacagaacgatggcggagatgccgagtcacccgggcctgaggccggcgggtctgcca
gtcccggacacttctggaacgagctggacccttaactacgaatgcccctgttcatctgcg
cttgcctggggcatggtttgcgttccctctcagctggacttgaggtccttgaagttctct
ttcaacatgttcgaccacccgattccccgggtcttccagaaccgcttctccacacagtac
cgctgcttctccgtgtccatgctagccgggcctaatgacaggtcagatgtggagaaagga
gggaagataattatgccaccctcagccctcgatcaactcagccgacttaatattacctat
cccatgctgttcaaactgaccaataagaattcggatcgcatgacacactgcggagtgctg
gaattcgtggctgatgagggtatctgctatctcccacactggatgatgcagaatttgctg
ttggaagaagggggcttggtgcaggtggaaagtgtcaaccttcaagtggctacatactcc
aaattccagcctcagagcccagacttcctggatatcaccaaccccaaagcagtgttagaa
aatgcattgagaaactttgcctgtctgaccactggggatgtgattgccatcaattacaat
gagaagatctatgaactacgggtgatggagacaaaacctgacaaagctgtgtccatcatt
gagtgtgacatgaatgtggactttgatgctcccttaggctacaaggaacctgaaagacaa
gtccagcatgaggagtcaacagaaggcgaagccgaccacagtggctatgcaggagagttg
ggcttccgtgccttttctggctctgggaatagactagatggaaagaagaaaggggtagag
cccagtccctccccaatcaagcctggagacattaaaagaggaattcccaattatgaattt
aaacttggtaaaataactttcatcagaaattcacgtccattggttaaaaaggttgaagag
gatgaagctggaggcagatttgttgctttctctggagaaggacagtccttgcgtaaaaag
ggaagaaaaccataa
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