KEGG   Spermophilus citellus (European ground squirrel): 308646753
Entry
308646753         CDS       T11988                                 
Symbol
ACTN1
Name
(RefSeq) alpha-actinin-1 isoform 1
  KO
K05699  actinin alpha 1/4
Organism
scil  Spermophilus citellus (European ground squirrel)
Pathway
scil04510  Focal adhesion
scil04517  IgSF CAM signaling
scil04518  Integrin signaling
scil04519  Cadherin signaling
scil04520  Adherens junction
scil04530  Tight junction
scil04670  Leukocyte transendothelial migration
scil04810  Regulation of actin cytoskeleton
scil05146  Amoebiasis
scil05203  Viral carcinogenesis
scil05322  Systemic lupus erythematosus
Brite
KEGG Orthology (KO) [BR:scil00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    308646753 (ACTN1)
   04518 Integrin signaling
    308646753 (ACTN1)
   04519 Cadherin signaling
    308646753 (ACTN1)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    308646753 (ACTN1)
   04520 Adherens junction
    308646753 (ACTN1)
   04530 Tight junction
    308646753 (ACTN1)
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    308646753 (ACTN1)
 09150 Organismal Systems
  09151 Immune system
   04670 Leukocyte transendothelial migration
    308646753 (ACTN1)
 09160 Human Diseases
  09161 Cancer: overview
   05203 Viral carcinogenesis
    308646753 (ACTN1)
  09174 Infectious disease: parasitic
   05146 Amoebiasis
    308646753 (ACTN1)
  09163 Immune disease
   05322 Systemic lupus erythematosus
    308646753 (ACTN1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:scil04131]
    308646753 (ACTN1)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:scil04812]
    308646753 (ACTN1)
   04147 Exosome [BR:scil04147]
    308646753 (ACTN1)
Membrane trafficking [BR:scil04131]
 Exocytosis
  Small GTPases and associated proteins
   Rab associated proteins
    308646753 (ACTN1)
Cytoskeleton proteins [BR:scil04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Cross-linking proteins
     308646753 (ACTN1)
Exosome [BR:scil04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   308646753 (ACTN1)
  Exosomal proteins of colorectal cancer cells
   308646753 (ACTN1)
  Exosomal proteins of bladder cancer cells
   308646753 (ACTN1)
SSDB
Motif
Pfam: Spectrin CH EFhand_Ca_insen EF-hand_8 EF-hand_1 EF-hand_6 EF-hand_7 EF-hand_5 XisI FUSC
Other DBs
NCBI-GeneID: 308646753
NCBI-ProteinID: XP_081146246
LinkDB
Position
4:complement(163935019..164029756)
AA seq 914 aa
MDHYDSQQTNDYMQPEEDWDRDLLLDPAWEKQQRKTFTAWCNSHLRKAGTQIENIEEDFR
DGLKLMLLLEVISGERLAKPERGKMRVHKISNVNKALDFIASKGVKLVSIGAEEIVDGNV
KMTLGMIWTIILRFAIQDISVEETSAKEGLLLWCQRKTAPYKNVNIQNFHISWKDGLGFC
ALIHRHRPELIDYGKLRKDDPLTNLNTAFDVAEKYLDIPKMLDAEDIVGTARPDEKAIMT
YVSSFYHAFSGAQKAETAANRICKVLAVNQENEQLMEDYEKLASDLLEWIRRTIPWLENR
VPENTMHAMQQKLEDFRDYRRLHKPPKVQEKCQLEINFNTLQTKLRLSNRPAFMPSEGRM
VSDINNAWGCLEQAEKGYEEWLLNEIRRLERLDHLAEKFRQKASIHEAWTDGKEAMLRQK
DYETATLSEIKALLKKHEAFESDLAAHQDRVEQIAAIAQELNELDYYDSPSVNARCQKIC
DQWDNLGALTQKRREALERTEKLLETIDQLYLEYAKRAAPFNNWMEGAMEDLQDTFIVHT
IEEIQGLTTAHEQFKATLPDADKERLAILGIHNEVSKIVQTYHVNMAGTNPYTTITPQEI
NGKWDHVRQLVPRRDQALTEEHARQQHNERLRKQFGAQANVIGPWIQTKMEEIGRISIEM
HGTLEDQLSHLRQYEKSIVNYKPKIDQLEGDHQLIQEALIFDNKHTNYTMEHIRVGWEQL
LTTIARTINEVENQILTRDAKGISQEQMNEFRASFNHFDRDHSGTLGPEEFKACLISLGY
DIGNDPQKKTGMMDTDDFRACLISMGYNMGEAEFARIMSIVDPNRLGVVTFQAFIDFMSR
ETADTDTADQVMASFKILAGDKNYITGDELRRELPPDQAEYCIARMAPYNGPDSVPGALD
YMSFSTALYGESDL
NT seq 2745 nt   +upstreamnt  +downstreamnt
atggaccattatgattcacagcaaaccaatgactacatgcagcccgaagaggactgggac
cgggacctgcttctggacccggcctgggagaagcagcagagaaagacattcacagcatgg
tgcaactcccacctgcggaaggcgggcacgcagatcgagaacatcgaggaggacttccga
gacggcctgaagctcatgctgctgctagaggttatctcaggcgaacgcttggccaagccg
gagagaggcaagatgcgagtccacaagatctccaatgtcaacaaggccctcgatttcata
gcaagcaaaggggtcaaactggtgtccattggtgccgaggaaatcgtggatgggaatgtg
aaaatgaccctgggcatgatctggaccatcatcctccgctttgccatccaagacatctct
gtggaagagacctcagccaaggaaggcctgctcctgtggtgtcagaggaagacggcccct
tacaaaaatgtcaacatccaaaatttccacatcagctggaaggatggccttggcttttgt
gccttgatccaccgacaccggcctgagctgattgactacgggaagctgcggaaggatgat
ccactcacaaacctgaacacggccttcgatgtggcagagaagtatctggacatccccaag
atgcttgatgctgaagacatcgttggaactgctcggcctgatgagaaagccatcatgact
tacgtgtccagcttctaccatgccttctctggagcccagaaggcggagacagctgccaat
cgcatctgcaaggtactggccgtcaaccaggagaacgagcagctaatggaagactacgag
aagctggccagtgatctgctggagtggatccgccgcaccatcccctggctggagaaccgg
gtgcccgagaacaccatgcacgccatgcagcagaagctggaggacttccgcgactaccgg
cgcctgcacaagccgcccaaggtgcaggagaagtgccagctggagatcaacttcaacacg
ctgcagaccaagctgcgcctcagcaaccggcctgctttcatgccctccgagggcaggatg
gtctcggacatcaacaatgcctggggctgcctggagcaggcagagaagggctatgaggag
tggctgctgaatgagatccggaggctggagcggctggaccacctggcggagaagttccgg
cagaaggcctccatccacgaggcttggacagatggcaaagaggccatgctgcggcagaag
gattatgagacggccaccctgtctgagatcaaggccctgctcaagaagcacgaggccttc
gagagcgatctggctgcccaccaggaccgcgtggagcagatagcggccatcgcacaggag
ctcaatgagctcgactattacgactcacccagtgtcaatgctcgctgccaaaagatctgt
gaccagtgggacaatctgggagctctaactcagaagcgaagggaagctctagagcggacg
gagaagctactggagaccattgaccagctgtacctggagtacgccaagcgggccgctccc
ttcaacaactggatggagggcgccatggaggacctgcaggacaccttcatcgtgcacacc
atcgaggagatccagggactgactacagcccacgaacagttcaaggccaccctccctgat
gctgacaaggagcgcctggccatcctgggcatccacaacgaggtgtccaagatcgtccag
acctaccatgtcaacatggcaggcaccaacccctacacaaccatcacgcctcaggagatc
aatggcaaatgggaccacgtgcggcagcttgtgccgcggagggaccaagctctgaccgag
gaacatgcccgccagcagcacaacgagaggctacgcaagcagtttggggcccaggccaac
gtcatcgggccctggatccagaccaagatggaggagattgggaggatctccattgaaatg
catgggaccctggaggaccagctcagccacctgcgacaatatgagaagagcattgtcaac
tacaagccaaagattgaccagctggaaggtgaccaccagctgatccaggaggctctcatc
tttgacaacaagcacaccaactataccatggagcatatccgcgtgggctgggagcagctg
ctcaccaccatcgccaggaccatcaacgaggtggaaaaccagatcctgacacgggatgcc
aagggcatcagccaggagcagatgaatgagttccgggcctctttcaaccactttgaccgg
gatcactccggcacgctgggtcctgaggagttcaaagcctgcctcatcagcttgggctat
gacattggcaacgacccccagaagaagacaggcatgatggacacggatgatttccgcgcc
tgccttatctccatgggttacaacatgggagaggcagaatttgcccgcatcatgagcatc
gtggaccccaaccgcctgggggtagtgacattccaggccttcattgacttcatgtcccga
gagacggctgacacggatacagcagaccaggtcatggcttccttcaagatcctggccgga
gacaagaactacatcacaggtgacgaactgcgccgagagctgccgcccgaccaggccgag
tactgcatcgcacgaatggccccctacaacggcccagactccgtgcccggtgctctggac
tacatgtccttctccacggcactgtatggcgagagtgacctctaa

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