Spermophilus citellus (European ground squirrel): 308647119
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Entry
308647119 CDS
T11988
Symbol
RPN2
Name
(RefSeq) dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 isoform 1
KO
K12667
dolichyl-diphosphooligosaccharide---protein glycosyltransferase subunit 2 (ribophorin II)
Organism
scil Spermophilus citellus (European ground squirrel)
Pathway
scil00510
N-Glycan biosynthesis
scil00513
Various types of N-glycan biosynthesis
scil01100
Metabolic pathways
scil04141
Protein processing in endoplasmic reticulum
Module
scil_M00072
N-glycosylation by oligosaccharyltransferase
Brite
KEGG Orthology (KO) [BR:
scil00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00510 N-Glycan biosynthesis
308647119 (RPN2)
00513 Various types of N-glycan biosynthesis
308647119 (RPN2)
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
308647119 (RPN2)
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GFIT
Motif
Pfam:
Ribophorin_II
Ribophorin_II_3rd
Ribophorin_II_C
Ribophorin_II_2nd
HSM3_N
Motif
Other DBs
NCBI-GeneID:
308647119
NCBI-ProteinID:
XP_081147136
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All DBs
Position
4:complement(21491277..21551184)
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AA seq
650 aa
AA seq
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MVWFPDVGSSTVFLLALTIIASIQALTPTHYLTKHDVERLKASLDRPFTSLESAFYSIVG
LSSLGAQVPDVKKACTFIKSNLDPSNVDSLFYAAQSSQALSGCEISVSNETKDMLLAAVS
EDSSVVQIYHAVAALSGLGLPLASQEALGALTARLGKEETVLATIQALQTASHLSQQADL
RNIVEEIEDLVARLDELGGMYLQFEEGLETTALFVAATYKLMDHVGTVPSIKEDQVIQLM
NTIFSKKNFESLSEAFSVACAAAALSQNQYHVPIVVVPEGPASATHDQAILRLQVTNVLS
QPLTQATVKLEHAKSVASRATVLQRTFFTLVGDVFELNFVNVKFSSGYYDFSVRVEGDNR
YIANTVELRVKISTEVGITNVDLSTVDKDQSIAPKTTRVTYPAKAKGTFIADSHQNFALF
FQLVDVNTGAELTPHQTFVRLHNQKTGQEVVFVAEPDSKNVYRFELDTSERKIEFDSASG
TYTLYLIIGDATLKNPILWNVADVVIKFPEEEAPSTVLSQNLFTPKQEIQHLFREPEKRP
PTVVSNTFTALILSPLLLLFALWIRIGANISNFTFAPSTIIFHLGHAAMLGLMYVYWTQL
NMFQTLKYLAILGSVTFLAGNRMLAQQAVKRIAAEQSSRLAKYRTLRTAH
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atggtttggttcccagatgttggttcaagcactgtcttcctgttggccctgacaatcata
gccagcattcaggctctgacgcccacccactacctcaccaagcatgacgtggagagactg
aaagcctcgctggaccgccccttcacaagtttagaatctgccttctactccatcgtggga
ctcagcagccttggggcccaggtgccagatgtaaagaaagcatgcaccttcatcaaatct
aaccttgatcccagcaacgtggattccctcttctatgctgcccagtccagccaggccctc
tcagggtgtgagatctctgtttcaaatgagaccaaagatatgctcctggcagctgtcagt
gaagactcttctgttgtccagatctaccacgccgtcgcagccctcagcggcttgggcctt
cccttggcatcccaggaagcactcggggccctcactgctcgcctaggcaaggaagagact
gtgctggcaacaatccaggctctgcagacagcatcccatctgtcccagcaagccgacctg
aggaacattgtggaggagattgaggaccttgttgctcgcctggatgaactggggggtatg
tatctccagtttgaagaaggattggaaaccacagcgttatttgttgctgccacctacaag
ctcatggaccacgtggggactgtgccatccattaaggaggaccaggtcatccagctaatg
aacacaatcttcagtaagaagaactttgagtcactctcagaagctttcagtgtggcctgt
gctgctgctgcactctcccagaatcaataccatgtgccaattgtagttgttcctgagggc
cccgcttctgccactcatgatcaggctatcctgaggttgcaagtcaccaatgttctgtcg
cagcctctgactcaggccactgttaagctagaacatgctaagtctgttgcttccagagcc
actgtcctccaaaggacatttttcaccctcgtaggggatgtttttgaactaaacttcgtg
aatgtcaaattttccagtggttattatgacttctctgtcagagttgaaggtgacaaccgt
tatattgcaaacactgtggagctcagagtaaagatttccactgaagttggcatcacaaat
gtcgatctttccactgtggataaggatcagagcattgcacccaaaaccacgcgggtgact
tatccagccaaagccaagggtacattcatcgcagacagccaccagaactttgccttattc
ttccagctggtagatgtgaacactggtgctgaactcactcctcaccagacatttgtccga
ctccacaaccagaagactggccaggaagtggtgtttgtcgctgagccagacagcaagaac
gtgtacaggttcgaactagatacctctgagaggaagatcgagtttgactccgcctcaggc
acctacactctctacttaatcattggagatgccactttgaagaacccaatcctctggaat
gtggctgatgtggtcatcaagttccctgaagaagaagctccctcgactgtcctatctcag
aaccttttcaccccgaaacaggaaattcagcacctgttccgagagcctgagaagaggccc
cccaccgtggtgtccaatacattcaccgccctcatcctttcgcccttgctcctgctcttt
gctctgtggatccggattggtgccaatatctccaacttcacttttgctcctagcacaatt
atctttcacctgggacatgctgctatgctggggctcatgtatgtctattggactcagctc
aacatgttccagaccctgaagtacctggccatcctgggcagcgtgacgtttctggctggc
aatcggatgttggcccagcaggcagtcaagaggatcgctgcagagcagagcagtagattg
gcaaaatataggacactacgaacagcacattag
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