Spermophilus citellus (European ground squirrel): 308647128
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Entry
308647128 CDS
T11988
Symbol
SEC23B
Name
(RefSeq) protein transport protein Sec23B isoform 1
KO
K14006
protein transport protein SEC23
Organism
scil Spermophilus citellus (European ground squirrel)
Pathway
scil04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
scil00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
308647128 (SEC23B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
scil04131
]
308647128 (SEC23B)
Membrane trafficking [BR:
scil04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
308647128 (SEC23B)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
Gelsolin
zf-Sec23_Sec24
RelA_RIS
Motif
Other DBs
NCBI-GeneID:
308647128
NCBI-ProteinID:
XP_081147150
LinkDB
All DBs
Position
4:43618305..43657889
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AA seq
767 aa
AA seq
DB search
MATYLEFIQQNEERDGVRFSWNVWPSSRLEATRMVVPLACLLTPLKERPDLPPVQYEPVL
CSRPTCKAVLNPLCQVDYRAKLWACNFCFQRNQFPPAYAGISEVNQPAELMPQFSTIEYV
IQRGAQSPLIFLYVVDTCLEEDDLQALKESLQMSLSLLPPDALVGLITFGRMVQVHELSC
EGISKSYVFRGTKDLTAKQIQDMLGLSKPAMPMQQARPAQPQEHPFVSSRFLQPIQKIDM
NLTDLLGELQRDPWPVTQGKRPLRSTGVALSIAVGLLEGTFPNTGARIMVFTGGPPTQGP
GMVVGDELKIPIRSWHDIEKDNARFMKKATKHYEMLANRTAANGHCIDIYACALDQTGLL
EMKCCTNLTGGHMVMGDSFNTSLFKQTFQRIFSKDFNGDFRMAFGATLEVKTSRELKIAG
AIGPCVSLNVKGPCVSENELGVGGTSQWKICGLDPTSTLGIYFEVVNQHNAPIPQGGRGA
IQFVTQYQHSSTQKRIRVTTIARNWADAQSQLRHIEAAFDQEAAAVLMARLGVFRAESEE
GPDVLRWLDRQLIRLCQKFGQYNKEDPTSFRLSDSFSLYPQFMFHLRRSPFLQVFNNSPD
ESSYYRHHFARQDLTQSLIMIQPILYSYSFHGPPEPVLLDSSSILADRILLMDTFFQIVI
YLGETIAQWQKAGYQDMPEYENFKHLLQAPLDDAQEILQARFPMPRYINTEHGGSQARFL
LSKVNPSQTHNNLYAWGQETGAPILTDDVSLQVFMDHLKKLAVSSAC
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
atggcaacatatctggagttcattcagcagaatgaagaacgagatggtgtacgtttcagt
tggaatgtgtggccttccagccgtcttgaggccacgagaatggttgttccactggcttgt
ctccttactcctttgaaagaacgaccagacctgcctcctgtacagtatgaacctgtgctt
tgcagccggccaacttgcaaagctgttctcaatccactttgtcaggttgattatcgagca
aaactttgggcttgtaatttctgtttccagagaaatcagtttcctccagcttatgcaggc
atatctgaggtgaatcaacctgctgaattgatgccccagttttctacaattgagtatgtg
atacagcgaggtgcacagtctcctctgatctttctctatgtggttgacacatgcctggag
gaagatgaccttcaagctctcaaagaatccctgcagatgtccctgagtctccttcctcca
gatgctctggtgggtctgatcactttcggaaggatggtgcaggttcatgaactgagctgt
gaaggaatctccaaaagttatgtcttccgagggaccaaggatttaactgcaaagcaaata
caggatatgctgggtttgtctaagccagccatgcccatgcagcaagcaagacctgctcaa
cctcaggagcacccttttgtttcaagcagatttctgcagcccattcaaaagattgatatg
aacctcactgatcttcttggggagctgcagagagacccatggccagtaactcaagggaag
agacctttgagatccactggtgttgctttgtccattgctgttggtttattggagggtact
ttcccaaacacaggagcccgtatcatggtatttactggaggtccccccacacaagggcct
ggcatggtggttggagatgaattaaagattcctattcgttcctggcatgatattgagaag
gataatgcacggttcatgaaaaaggcaaccaagcactatgagatgcttgctaatcgaact
gctgcaaatggtcactgcattgatatttatgcttgtgcccttgaccaaactggactattg
gagatgaagtgttgtacaaatcttactggaggccacatggtgatgggagattctttcaac
acttctctcttcaagcagacattccaaagaatctttagtaaagattttaatggggatttc
cgaatggcatttggtgctactttagaagtaaagacatctcgggaactgaagattgctggt
gccattggtccatgtgtatctctaaacgtgaaaggaccctgtgtgtcagaaaatgagctt
ggtgttggtggcacgagtcagtggaaaatctgtggtctggatcctacatctacacttggc
atctactttgaagttgtcaatcagcacaatgccccgatcccccaaggaggcagaggtgcc
atccagtttgtcacgcagtatcagcactccagtacccagaagcgcatccgtgtgaccacc
attgcccgaaattgggcagatgcacagagtcagctcaggcatatagaagctgcatttgac
caggaggctgcagcagttttgatggcacggcttggagtgttccgggcagaatcagaggag
gggcccgatgtgctccgatggttggaccgacaactcatccgactgtgtcagaagtttgga
cagtataacaaagaagaccccacttcttttaggttatcagattccttttctctatatcct
cagttcatgttccatcttagaagatctccatttcttcaagtgtttaacaacagtcctgat
gagtcgtcctattatagacaccactttgccaggcaggatctgactcagtctctcatcatg
atccagcccattctctactcctactcattccacgggccaccagagccagttctcttggat
agcagcagcattctggcggacagaattttgctgatggatactttcttccaaattgtcatt
tatcttggtgagaccatagcccagtggcagaaagctggctaccaagacatgcctgagtac
gaaaatttcaagcaccttttgcaggcaccattggatgatgctcaagaaattctgcaagcc
cgcttcccaatgccgcgttacatcaacacggagcatggtggtagtcaagctcgatttctt
ctgtccaaagtgaacccttctcagacacacaataacctgtatgcttggggacaggaaact
ggagcacccatcctcactgatgatgtcagcctgcaggtgttcatggatcatttgaagaaa
ttggctgtctccagtgcctgttaa
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integrated database retrieval system
