Spermophilus citellus (European ground squirrel): 308647625
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Entry
308647625 CDS
T11988
Symbol
GTF2H2C
Name
(RefSeq) general transcription factor IIH subunit 2-like protein isoform 1
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
scil Spermophilus citellus (European ground squirrel)
Pathway
scil03022
Basal transcription factors
scil03420
Nucleotide excision repair
scil05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
scil00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
308647625 (GTF2H2C)
09124 Replication and repair
03420 Nucleotide excision repair
308647625 (GTF2H2C)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
308647625 (GTF2H2C)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
scil03021
]
308647625 (GTF2H2C)
03400 DNA repair and recombination proteins [BR:
scil03400
]
308647625 (GTF2H2C)
Transcription machinery [BR:
scil03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
308647625 (GTF2H2C)
DNA repair and recombination proteins [BR:
scil03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
308647625 (GTF2H2C)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ssl1
VWA_2
C1_4
VWA
Zn_ribbon_GTF2H2
HscB_4_cys
ORC3_N
Motif
Other DBs
NCBI-GeneID:
308647625
NCBI-ProteinID:
XP_081148054
LinkDB
All DBs
Position
1:complement(231319551..231339716)
Genome browser
AA seq
395 aa
AA seq
DB search
MDEEPERTKRWEGGYERTWEILKEDESGSLKATIEDILFKAKRKRVFEHHGQVRLGMMRH
LYVVVDASRTMEDQDLKPNRLTCTLKLLEYFIEEYFDQNPISQIGIIVTKSKRAEKLTEL
SGNPRKHITSLKKAVDMTCHGEPSLYNSLSMAMQTLKHMPGHTSREVLIIFSSLTTCDPS
NIYDLIKTLKAAKIRVSVIGLSAEVRVCTVLARETGGTYHVILDESHYKELLTHHVSPPP
ASSSSECSLIRMGFPQHTIASLSDQDAKPSFSMAHLDNNTEPGLTLGGYFCPQCRAKYCE
LPVECKICGLTLVSAPHLARSYHHLFPLDAFQEIPLEEFKGERFCYGCQGELKDQHVYVC
TVCQNVFCVDCDVFVHESLHCCPGCIHKIPTPSGI
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atggatgaagaacctgaaagaactaagcggtgggaaggaggctatgagaggacatgggaa
attcttaaagaagatgaatctggttcacttaaagctacaatagaagacattctcttcaag
gcaaagagaaaaagagtatttgagcaccatggacaagtgcgacttggaatgatgcgccac
ctttatgtggtagtggatgcatcaaggacaatggaagaccaagatttaaagcctaataga
ctgacatgcactttaaagttgttggaatacttcatagaagagtattttgatcaaaatcct
atcagtcagattggaataattgtaactaagagtaaaagagctgaaaaactgactgaactc
tcaggaaacccaaggaaacatataacatctttgaagaaagctgttgatatgacctgtcat
ggagagccatctctttataattccctaagcatggctatgcaaactctaaaacacatgcct
ggacatacaagtagagaagtcctaatcatttttagcagccttacaacttgtgatccatct
aatatttatgatctaatcaagaccctaaaggcagctaaaattagagtgtctgttattggg
ttatctgcagaggttcgagtttgcactgtacttgctcgtgaaactggtggcacataccat
gttattttagatgaaagccattacaaagaattgctaacacatcatgttagtcctcctcct
gccagctcaagttctgaatgctcactcattcgtatggggtttcctcagcacaccattgct
tctttgtctgatcaagatgcaaaaccctctttcagcatggcgcatttggataacaacact
gagccaggacttacattaggaggctatttttgcccacagtgtcgtgcaaagtactgtgaa
cttcctgttgaatgtaaaatatgtggtcttactttggtttctgctccccatttggcacgg
tcttaccatcatttatttcctttggatgcttttcaagaaattcccctggaagaatttaaa
ggagaaagattttgttatggatgtcagggggagttgaaagaccaacatgtctatgtttgt
actgtgtgccaaaatgttttctgtgtggactgtgatgtttttgttcatgaatctctccat
tgttgtcctggctgtattcataagattccaactccttcaggtatttga
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