Spermophilus citellus (European ground squirrel): 308647737
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Entry
308647737 CDS
T11988
Symbol
TAF4
Name
(RefSeq) transcription initiation factor TFIID subunit 4
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
scil Spermophilus citellus (European ground squirrel)
Pathway
scil03022
Basal transcription factors
scil05016
Huntington disease
Brite
KEGG Orthology (KO) [BR:
scil00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
308647737 (TAF4)
09160 Human Diseases
09164 Neurodegenerative disease
05016 Huntington disease
308647737 (TAF4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
scil03021
]
308647737 (TAF4)
03036 Chromosome and associated proteins [BR:
scil03036
]
308647737 (TAF4)
Transcription machinery [BR:
scil03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
308647737 (TAF4)
Coactivators
SAGA/TFTC/STAGA complex
308647737 (TAF4)
Chromosome and associated proteins [BR:
scil03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
308647737 (TAF4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF4
TAFH
tRNA-synt_1c
Motif
Other DBs
NCBI-GeneID:
308647737
NCBI-ProteinID:
XP_081148290
LinkDB
All DBs
Position
4:1902611..1972290
Genome browser
AA seq
1033 aa
AA seq
DB search
MAAGSDLLDEVFFNSEVDEKVVSDLVGSLESQLAASAAHHHHLAPRAPELRAAAAGALGN
HVVSGSPAGAAGAGPAAPAEGAPAAAPEPPPAGRARPAGGGPRRAGPGSPRRPLVPAGPA
PAPAKLRPPPEASAGPCPAAAAAAAAAAAGPEPAAAAPPAGPGPGPGAAKPGPPGPGAAQ
TLNGSAAPPTAPHAAPAVSPVNNGPAPPPAAGSVIQAAPAPAPAAPSPPAAPAPAAPPPP
APPAPAAPARPPGLPAAPAPPAPAAAQNGAGAAPAPAPAPAAGGAAGLSGQPGPGAPAQG
AKAEPPKTAGPAAAGAAAGVLLGPAMQGALPGPAGGPPPAPGPPAGLSKGAAGAATPSLP
RTPSAATGGIRATLTPTVLAPRLPQPPQNPTNIQNFQLPPGMVLVRSENGQLLMIPQQAL
AQMQAQAHAQAQPQSTMAPRPAAPTSAPPVQISTVQAPGTPIIARQVTPTTIIKQVSQAQ
TTVQPTATLQRSPGVQPQLVLGGSAQAASLGTATAVQAGAPQRTVPGAASASTAATETME
NVKKCKNFLSTLIKLASSGKQSTETAANVKELVQNLLDGKIEAEDFTSRLYRELNSSPQP
YLVPFLKRSLPALRQLTPDSAAFIQQSQQQQPPASQATTALTAVVLSGSVQRTAGKTAAS
VSSALQPPVISLTQPTQVGPGKQAQSAPLVIQQPPKPGALIRPPQVTLTQTPMVALRQPH
SRIMLTTPQQIQLNQLQPVPVVKPTVLPGTKALPAVAAQAAAAQKNKLKEPGGGSFRDDD
DINDVASMAGVNLSEESARILATNSELVGTLTRSCKDDTFLLPAPLQRRILEIGKKHGIT
ELHPDVVSYVSHATQQRLQNLVEKISETAQQKNFSYKDDDRYEQASDVRAQLKFFEQLDQ
IEKQRKDEQEREILMRAAKSRSRQEDPEQLRLKQKAKEMQQQELAQMRQRDANLTALAAI
GPRKKRKVDCAGPGSGAEGSGPGVAVPGSSGVGAPRQFTRQRITRVNLRDLIFCLENERE
TSHSLLLYKALLK
NT seq
3102 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgggctcggatctgctggacgaggtcttcttcaacagcgaggtggacgagaaa
gtggtgagcgacctggtgggctcgctcgagtcgcagctggcggccagcgcggcccaccac
caccacctcgcgccgcgcgcgcccgagctgcgggccgcggccgccggcgcgctcgggaac
catgttgtgagcggcagcccggccggagccgcgggcgcagggccggccgcccccgccgag
ggcgcgcccgcagcggcgccggagccgccccccgcaggtagagcgcggccggcgggcggg
gggccgcggcgcgcgggccccggctcaccacgccgcccgcttgtccccgcagggcccgcg
ccggcgcccgccaagctgaggccgccgcccgaggccagcgcggggccctgcccggccgcc
gccgccgccgccgccgccgccgccgccgggcccgagcccgccgccgccgccccgcccgcc
ggccccggccccggccccggcgccgccaagcccggcccgcccggccccggcgccgcgcaa
actttgaatgggagcgccgcgccgcccaccgcgccgcacgccgcacctgctgtcagcccg
gtcaacaacgggcccgcgccgccgcccgccgccggctccgtcatccaggcggcccccgcg
cccgcgcccgccgcgccctcgccgcccgccgcgcccgcgcccgccgcgcccccgccgccc
gcgccccccgcgcccgccgcacccgcccggccgcccggcctccccgccgcgcccgcgccc
cccgcgcccgccgccgcacagaacggggccggcgccgcccccgcccccgcccccgccccg
gccgccgggggcgccgcggggctcagcggccagccggggcccggcgcgcccgcgcagggg
gccaaggccgagccgcccaagacggcggggccggcggcggcgggcgcggcggccggcgtg
ctgctcgggcctgcgatgcaaggggcgctgccggggcccgccggcggcccgccgccagcc
cctggacccccggcggggctgtccaaaggcgcggccggcgcggcgacccccagcctgccg
cggacaccctcggccgccaccggcgggatccgggccaccctgacgcccaccgtgttggcc
cctcgcctgccgcagccgccgcagaacccgaccaacatccagaacttccagctgccccca
ggaatggtccttgtgcggagcgagaatggacagttgttaatgattcctcagcaggccctg
gcccaaatgcaggcccaggcccacgcccaagcccagcctcagagcaccatggcgccccgc
cctgcggcccccacaagtgcccctcccgtccagatctccaccgtacaggctcctggcaca
cctatcattgcacggcaggtgacccccactacaataattaagcaagtgtctcaggcccag
acgacggtacagcccactgcaaccctgcagcgctcccctggggtgcagcctcagctggtc
ctgggcggctctgcccaggcagcttcactcgggacggccacagctgtgcaggcaggggca
cctcagcgcacggtcccaggggcggccagcgcctccacagctgccacggaaaccatggaa
aacgtgaagaaatgtaaaaattttctgtctacgttaataaaactggcttcatctggtaaa
cagtccacagagacagcagctaacgtgaaagaactggtgcagaacttactggatgggaag
atcgaagccgaagatttcactagcaggttataccgagaactcaattcttcacctcaacct
tacctcgtgcctttcctgaagaggagtttacccgccttgagacagctgacccccgactcc
gcggccttcatccagcagagccagcagcagcagccacccgcctcacaggccaccaccgca
ctaacggccgtggtgctgagcggctctgtgcagcgcacggccggcaagacggccgcctcc
gtgagcagcgccctgcagccccctgtcatcagcctcacgcagcccacacaggtgggccct
ggcaagcaggcacagtctgcaccgctggtgatccagcagcccccgaagccaggagccctg
atccggcctccgcaggtgaccttgacccagacgcccatggtcgccctgcggcagcctcac
agccggatcatgctcaccactccccagcagatccagctgaaccagctgcagccagtcccg
gtggtgaagcccactgtgttacctggaaccaaagcccttcctgccgtcgccgcgcaggca
gcagccgcacagaaaaacaagctcaaggagcctgggggaggttcgtttcgggacgacgat
gacattaatgatgttgcgtcaatggctggagtaaacctgtcggaagaaagtgcaaggata
ctggccacaaactctgagttggtgggcacgctgacgaggtcctgtaaggacgacaccttc
ctcctccccgcgccattgcagagaaggatattggaaataggtaaaaagcacggcataacg
gaattacatccagacgtagtaagttatgtatcccatgccacacagcaaaggctacagaat
cttgtagaaaaaatatctgaaacggctcagcaaaaaaacttctcctataaggatgatgac
agatacgagcaggcaagcgatgtccgggctcagctcaaattttttgaacagcttgatcag
attgaaaagcagaggaaagatgagcaggagagggagatcttgatgcgggcagcaaagtct
cgatccagacaagaagacccagaacaattaagactgaagcagaaggcgaaagagatgcag
cagcaggagctggcacagatgcgacagcgggatgccaacctcacagccctggcagcgatc
gggcccaggaaaaagaggaaagtggactgtgcagggccaggatccggagcagagggctcg
ggccccggtgtggcagtcccaggcagctccggcgtgggagcccccaggcagttcactcgg
cagagaatcacacgggtcaacctcagggacctcatattttgtttagagaatgagcgcgag
acaagccattcactgttgctctacaaagcactcctcaagtaa
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