KEGG   Spermophilus citellus (European ground squirrel): 308647837
Entry
308647837         CDS       T11988                                 
Symbol
TUBB1
Name
(RefSeq) tubulin beta-1 chain
  KO
K07375  tubulin beta
Organism
scil  Spermophilus citellus (European ground squirrel)
Pathway
scil04145  Phagocytosis
scil04517  IgSF CAM signaling
scil04540  Gap junction
scil04814  Motor proteins
scil05010  Alzheimer disease
scil05012  Parkinson disease
scil05014  Amyotrophic lateral sclerosis
scil05016  Huntington disease
scil05020  Prion disease
scil05022  Pathways of neurodegeneration - multiple diseases
scil05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:scil00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    308647837 (TUBB1)
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagocytosis
    308647837 (TUBB1)
  09144 Cellular community - eukaryotes
   04540 Gap junction
    308647837 (TUBB1)
  09142 Cell motility
   04814 Motor proteins
    308647837 (TUBB1)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    308647837 (TUBB1)
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    308647837 (TUBB1)
   05012 Parkinson disease
    308647837 (TUBB1)
   05014 Amyotrophic lateral sclerosis
    308647837 (TUBB1)
   05016 Huntington disease
    308647837 (TUBB1)
   05020 Prion disease
    308647837 (TUBB1)
   05022 Pathways of neurodegeneration - multiple diseases
    308647837 (TUBB1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:scil03036]
    308647837 (TUBB1)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:scil04812]
    308647837 (TUBB1)
   04147 Exosome [BR:scil04147]
    308647837 (TUBB1)
Chromosome and associated proteins [BR:scil03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     308647837 (TUBB1)
Cytoskeleton proteins [BR:scil04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    308647837 (TUBB1)
Exosome [BR:scil04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   308647837 (TUBB1)
  Exosomal proteins of colorectal cancer cells
   308647837 (TUBB1)
  Exosomal proteins of bladder cancer cells
   308647837 (TUBB1)
SSDB
Motif
Pfam: Tubulin Tubulin_C Misat_Tub_SegII Tubulin_3 Tubulin_2 BPS1
Other DBs
NCBI-GeneID: 308647837
NCBI-ProteinID: XP_081148459
LinkDB
Position
4:14321649..14327872
AA seq 451 aa
MREIVHIQIGQCGNQIGAKFWEVIGEEHGIDCAGSDLGASALQLERISVYYNEAYGKKYV
PRAVLVDLEPGTMDSIRSSRLGALFQPDSFVHGNSGAGNNWAKGHYTEGAELIENVMDVV
RNESESCDCLQGFQIVHSLGGGTGSGMGTLLMNKIREEYPDRILNAFSVMPSPKVSDTVV
EPYNAVLSIHQLIEHADACFCIDNEALYDICFRTLKLTTPTYGDLNHLVSLTMSGITTSL
RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTAQGSLQYRALSVAELTQQMFDARNTM
AACDPRRGRYLTVACIFRGKMSTKEVDQQLLSVQTRNSSCFVEWIPNNVKVAVCDIPPRG
LNMAATFIGNNTAIQELFSRASEHFSAMFKRRAFVHWYTSEGMDINEFGEAESNVHDLVS
EYQQFQDAKANLEESEEVMEQVETEAEEKEP
NT seq 1356 nt   +upstreamnt  +downstreamnt
atgcgggaaatcgtgcacattcaaatcggccagtgtggcaaccagattggagccaagttc
tgggaggtgattggtgaggaacacgggatcgactgtgctgggagtgacctcggggcatct
gctttgcagctggaaagaatcagtgtgtactacaacgaagcctacggtaagaagtatgtg
ccccgagcagtcctggtggacctggaacctgggacgatggatagcatccgatccagcaga
ttaggagccctctttcaaccagacagctttgtgcatggtaactctggggctggcaacaac
tgggcaaagggccattataccgagggagccgagctgatcgagaacgtcatggatgtagtg
aggaacgagagcgagagctgtgactgcctgcagggcttccagatcgtccactccctgggt
gggggcacaggctccggcatgggcactctgctcatgaacaagatccgagaggagtaccca
gaccggatcttaaatgccttcagcgtcatgccgtcccccaaagtgtcggacacggtggtg
gagccctacaacgccgtgctgtccatccaccagctgattgagcacgctgatgcctgcttc
tgcatagacaacgaggcactctacgacatctgcttccgcacgctgaagctgaccacgccc
acctatggggacctcaaccacctggtgtccttgaccatgagcggcatcaccacttccctg
cgcttcccgggccagctcaatgcagacctgcgcaagctggccgtgaacatggtgcccttc
cctcgcctgcacttctttatgccgggctttgccccgctcaccgcccaaggcagcctgcag
taccgggccctctccgtggcggagctcactcagcagatgtttgatgcccgcaacaccatg
gctgcctgtgacccacgccgtggccgctacctgacagtggcctgcatcttccggggtaag
atgtccacaaaggaagtggaccagcagctgctctctgtgcagacgaggaacagcagctgt
ttcgtggagtggattcccaacaacgtcaaggtggctgtctgtgacatccctccccggggg
ctgaacatggcggccaccttcataggcaacaatacagccattcaagagctcttcagcagg
gcttctgagcatttctcagccatgttcaaaaggagagcttttgtgcattggtacaccagt
gaagggatggacatcaacgagtttggggaagccgaaagcaacgtccatgatttggtgtcc
gagtaccaacaatttcaagatgccaaagccaatctggaagaaagtgaagaggtgatggag
caggtagaaacggaagcagaggagaaggagccttag

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