Spermophilus citellus (European ground squirrel): 308648467
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Entry
308648467 CDS
T11988
Symbol
LOC308648467
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm6
KO
K12625
U6 snRNA-associated Sm-like protein LSm6
Organism
scil Spermophilus citellus (European ground squirrel)
Pathway
scil03018
RNA degradation
scil03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
scil00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
308648467 (LOC308648467)
09123 Folding, sorting and degradation
03018 RNA degradation
308648467 (LOC308648467)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scil03019
]
308648467 (LOC308648467)
03041 Spliceosome [BR:
scil03041
]
308648467 (LOC308648467)
Messenger RNA biogenesis [BR:
scil03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
308648467 (LOC308648467)
mRNA degradation factors
5'-3' decay
Lsm complex
308648467 (LOC308648467)
Spliceosome [BR:
scil03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
308648467 (LOC308648467)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
308648467
NCBI-ProteinID:
XP_081149353
LinkDB
All DBs
Position
4:131185713..131186402
Genome browser
AA seq
80 aa
AA seq
DB search
MSLRKQTPSDFLKQIIGRPVVVKLNSGVDYRGVLACLDGYMNIALEQTEEYVNGQLKNKY
GDAFIQGNNVLYISTQKRRM
NT seq
243 nt
NT seq
+upstream
nt +downstream
nt
atgagtctgcggaagcaaacccctagtgacttcttaaagcaaatcatcggacggccagtt
gtggtaaaattaaattctggagtggattatcgaggggtcttagcttgcctggatggctac
atgaacatagccctggagcagacagaagaatatgttaatggacagctgaagaataagtat
ggggatgcatttatccaaggaaacaatgtgttatacataagtacgcagaagagaaggatg
tga
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integrated database retrieval system
