Spermophilus citellus (European ground squirrel): 308648668
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Entry
308648668 CDS
T11988
Symbol
EFL1
Name
(RefSeq) elongation factor-like GTPase 1 isoform 1
KO
K14536
ribosome assembly protein 1 [EC:3.6.5.-]
Organism
scil Spermophilus citellus (European ground squirrel)
Pathway
scil03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
scil00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
308648668 (EFL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
scil03009
]
308648668 (EFL1)
Ribosome biogenesis [BR:
scil03009
]
Eukaryotic type
Pre-60S particles
GTPases
308648668 (EFL1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFL1
EFG_C
EFG_III
EF-G_D2
GTP_EFTU_D2
EFG_IV
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
308648668
NCBI-ProteinID:
XP_081149720
LinkDB
All DBs
Position
4:70849970..70994096
Genome browser
AA seq
1128 aa
AA seq
DB search
MVLNSLDKMIQLQKNTANIRNICVLAHVDHGKTTLADCLISSNGIISSRLAGKLRYMDSR
EDEQIRGITMKSSAISLHYAKDSEEYLINLIDSPGHVDFSSEVSTAVRICDGCIIVVDAV
EGVCPQTQAVLRQAWLENIRPVLVINKIDRLIVELKFTPQEAYSHLKNILEQINALTGTL
FTSKVLEERAERDTESQVNPNSEQGEQVYDWSTGLEDTDDSHLYFSPEQGNVVFTSAIDG
WGFGIEHFAKIYSKKIGIKKEVLLKTLWGDYYINMKAKKIMKVDQAKGKKPLFVQLILEN
IWSLYDAVLKKDKEKIDKIVTSLGLKIGVREARHSDPKVQINAICSQWLPISHAVLSMVC
QKLPSPLDITAERVEKLLCTGSQTFDSLPLETQALKAAFMKCGSEDTAPVIIFVSKMFAV
DAKALPQNKPRPLTQEEIAQRRERARQRHAEKLAAAQGQAPLEPTQDASALETSPQREEP
RGDEQQVESMATNPVPQEGSNQESFIAFARVFSGVARRGEKIFVLGPKYSPIEFLQRVPL
GFSAPPDDLPPVPHMACCTLENLYLLMGRELEDLEEVPPGNVLGIGGLQDFVLKSATLCS
LPSCPPFIPLNFEATPIVRVAVEPKHPSEMPQLVKGMKLLNQADPCVQILIQETGEHVLV
TAGEVHLQRCLDDLKERFAKIHISVSEPIIPFRETITKPPKVDMVNEEIGKQQKVAVIHQ
TKEDQSKIPEGIQVDSDGLITMTTPNKLATLSVRAVPLPEEVTQILEENSDLIRSMELLT
SSLNEGKNTQMIHQKTQEKIWEFKGKLEQHLTGRKWRNTVDQIWSFGPRKCGPNILVNKS
EDFQNSVWIGPTGRSSKEASRYRDLGNSIVSGFQLATLSGPMCEEPLMGVCFVLEKWDLS
KFEEQGASDKQNQEQIDLLGERQEEDKIHPSGEENQEVQGVCLEPFEKRTSPKGDSSITD
CYGPFSGQLIATMKEACRYSLQVKPQRLMAAMYTCDIMATSDVLGRVYAVLSKREGRVLQ
EEMKEGTDMFIIKAVLPVAESFGFADEIRKRTSGLASPQLVFSHWEVIPSDPFWVPTTEE
EYLHFGEKADSENQARKYMNAVRKRKGLYVEEKIVEHAEKQRTLSKNK
NT seq
3387 nt
NT seq
+upstream
nt +downstream
nt
atggtgctcaatagtttggataagatgattcaactccagaaaaacactgctaacatcagg
aatatatgtgttttggctcatgttgaccatggaaaaactactcttgctgattgtcttata
tctagtaatgggatcatctccagccgcctggcaggcaagctaaggtacatggacagcaga
gaagatgaacagatacgagggatcactatgaaatccagtgctatttccctacattatgca
aaagatagtgaggaatacctgattaatctcatagactctccaggacacgtggatttctcc
tcagaagtatcaacggctgttcgtatttgtgatggatgcatcatagtggtagatgctgtg
gaaggggtctgtccacagacacaggcagttttgcggcaagcctggctcgaaaacatccgt
ccagttttggtgattaataagatagatcggttgatagtggagctaaaatttaccccacag
gaggcctattctcacctcaagaatattttagaacagattaatgcactcacaggaactctt
tttacttctaaagtcctagaagaaagagcagagagagacactgaatcccaagtgaatcca
aattctgaacaaggagagcaagtgtatgactggagtactggcttggaagacacggatgat
tctcacctttacttctctccagaacagggaaatgtggtgtttaccagtgcaatagatggg
tggggctttggaattgagcattttgccaaaatctatagcaaaaaaattggcatcaaaaag
gaagttcttttgaaaaccttgtggggagattattatataaatatgaaggctaagaaaata
atgaaggttgatcaggcaaaaggaaagaaacctttatttgtacagttgatcctggaaaat
atatggagtttgtatgatgctgtcttgaaaaaggacaaagaaaaaattgataaaatagtg
acttctttaggattaaaaattggagtccgggaggcacgccattcagatcctaaagttcag
atcaatgccatttgcagtcagtggctacctatctcccatgctgttctttctatggtgtgt
cagaaacttcctagcccccttgatattaccgctgagagagttgagaaactcctgtgcacg
ggatcgcaaacgttcgactctcttccactggaaactcaagcactgaaagcagcttttatg
aaatgtggaagtgaggacactgctccagttattatctttgtttccaaaatgtttgcagtt
gatgccaaggccttgcctcagaataagccaaggcctcttactcaagaagaaattgctcaa
agacgtgaacgtgcaagacagaggcatgcagagaagctcgctgcagcacaagggcaggca
cctttggagcccacccaagatgcgagtgccctggaaacaagcccacaaagagaagagcca
agaggtgatgagcaacaggtggagagtatggccactaatcctgtgccccaggaaggaagc
aaccaagagtcttttattgcatttgctcgtgtattcagcggtgtagctcgaagaggagag
aaaatttttgtcttggggcccaagtacagtcctattgagtttttgcaaagggtaccatta
ggcttctcagccccaccagatgaccttcccccagtccctcacatggcgtgctgtacactg
gaaaacctgtatcttctgatgggcagggaactggaagatctagaggaggtacctccagga
aatgtgctaggaataggaggcttgcaagacttcgtgctaaaatccgcaacactgtgtagc
ctgccatcctgcccaccatttataccactcaactttgaagcaacacctattgtgagagtt
gctgttgagccaaagcacccaagtgaaatgcctcagcttgtgaaaggaatgaagctgcta
aaccaggctgatccctgtgtccagattttaattcaggaaactggagaacacgttttagtc
acagcgggggaggtccaccttcaaagatgcttggatgacttaaaagaaaggtttgcaaag
attcatatcagtgtatcagaacccattattccattcagagaaacaatcacaaaacccccc
aaagttgacatggtcaatgaagaaataggcaaacaacaaaaagttgcagtcatacaccaa
acaaaagaagaccaaagcaaaatccctgaaggaatccaagttgactctgatgggttaatc
actatgacaactcccaataaacttgccaccctcagtgttcgagctgttccccttccagaa
gaagtcactcagattctggaagaaaatagtgatttgattcgttccatggagctgttgaca
tcctctttgaatgagggcaaaaatactcagatgattcatcagaagacccaagagaaaatt
tgggaattcaaaggaaaactagagcaacatttaacagggagaaaatggaggaatactgtt
gatcaaatctggtcatttggcccaagaaaatgtgggcctaacatactagttaataaaagt
gaagattttcagaactctgtatggataggcccaactggcagatcttcaaaagaagccagt
agataccgagatttgggcaatagcattgtgagtggttttcagttagcaaccctctctggc
cccatgtgtgaggagcccctcatgggtgtctgttttgttctggaaaaatgggacctaagt
aaatttgaggaacaaggagcaagtgataagcaaaatcaagagcaaattgatctgctagga
gagagacaggaagaagataagattcatcctagtggagaggaaaaccaagaggtacaaggt
gtctgcttagagccttttgagaagaggacttccccgaaaggagactcttcaatcactgac
tgctatggacctttctcaggacagctaattgccaccatgaaagaagcatgtcgctactca
ctgcaagtgaaacctcagcgcttgatggcagctatgtacacatgcgacatcatggccacc
agtgatgttcttggtcgagtctatgctgtcttgtcaaagagagaaggtcgagtgcttcaa
gaagaaatgaaagaagggacagacatgttcatcatcaaggctgtcctgcctgtggctgaa
agctttggttttgctgatgaaatcaggaagaggacgagtggcctggccagcccgcagctg
gtgttcagccactgggaggtcattcccagcgaccccttctgggtgccaactactgaggaa
gagtacttgcactttggggagaaggctgattctgagaaccaggcccggaagtacatgaat
gcagtacggaagcggaaggggctttatgtggaagaaaagattgtggaacacgcagaaaag
cagagaacacttagcaaaaataagtag
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