Spermophilus citellus (European ground squirrel): 308649880
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Entry
308649880 CDS
T11988
Symbol
NUP153
Name
(RefSeq) nuclear pore complex protein Nup153 isoform 1
KO
K14296
nuclear pore complex protein Nup153
Organism
scil Spermophilus citellus (European ground squirrel)
Pathway
scil03013
Nucleocytoplasmic transport
scil03250
Viral life cycle - HIV-1
scil05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
scil00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
308649880 (NUP153)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
308649880 (NUP153)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
308649880 (NUP153)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scil03019
]
308649880 (NUP153)
Messenger RNA biogenesis [BR:
scil03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
308649880 (NUP153)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup153
Zn_ribbon_RanBP
Nup_retrotrp_bd
Motif
Other DBs
NCBI-GeneID:
308649880
NCBI-ProteinID:
XP_081151852
LinkDB
All DBs
Position
5:8317610..8382326
Genome browser
AA seq
1445 aa
AA seq
DB search
MASGAGGIGGGGGGKIRTRRCHQRPIKPYQPGPPQHQGILSRVTESVKNIVPGWLQRYFN
KNEDACSCSTETSEVPHWPENRDDDHVIYGHEESSNINDGRITPEPAVSNTEEPSTTSTA
SNYPDVLTRPSLHRSHLNFSMLESPALHCQPSTSSAFPIGSSGFSLVKEIKDSTSQHDDD
NISTTSGFSSRASDKDIAVSKNTSLPPLWSPEAERSHSLSQHTATSSKKPAFNLSAFGTL
SSSLGNSSNLKTSQLGDSPFYPGKTTYGGAAAARQSKLRNTPYQAPVRRQMKAKQLNAQS
YGVTSSTARRILQSLEKMSSPLADAKRIPSVVSSPLNSPLDRSGIDITDFQAKREKVDAQ
YPPVQRLMTPKPVSIAANRTVYFKPSLTPSGELRKVNQRIDKKDSTGYEKNMTPRQNREQ
ESGFSYPNFSIPAANGLSSGVGGGGGKMRRERTRFVASKHSEEQEMEVPVLPKIPLPITG
SSLPTFNFSSPAITTSSLSPIGPSQSLTNKVQMTSPSSPGSPMFRFSSPIVKSTEADILP
PSSIGFTFSVPVAKTEFSGSTSTSEPSISSSAQDITVVNSTSYKKRDEDCEGLFRPVKIL
KEGSVLDVLKSPGFTSPKVDPLAAQSTTTSPVVYTRPAISTFSLSGIGFGENLKGGSSWQ
CDTCLLQNKVTDNKCIACQAAKLPSRETAKQTGSGTPTKSGKATLSASATGFGDKFKPGT
WDCDTCLVQNKPEAMKCVACETPKPGTGVKRVLTLTVVSESAGTMAASSSSCTVASGSLG
FGDKFKKPVGSWECPVCCVSNNAEDNKCVSCTSEKPGSSIPASSSSTVSVSLSSGGCLGL
DKFKKPEGSWDCEVCLVQNKADSSKCVACESAKPGTKAEFKGFGTSSSSLNPSTTSFKFG
IPSSSGPCVSSDSGSINPISEGFKFSKPTGDFKFGVSSDSKPEEVKKDSKNDNFKFGLSS
GSSNPASSASFQFGVSNLGQQEKKEELPKSSPAGFSFGTGVINPTPAATETVVTSENKSS
FSFGTMETKSVSVAPFTCKMTEAKKEEMPTTKGGFTFGNMEPSSLPSASMFVLGRTEEKQ
QEPVTSTSLVFGKKADNEEPKCQPVFSFGNSEQTKDESSSKSTFSFSMTKPSEKESDQPA
KSTFAFGAQTNTTVDQGAAKPVFSFLNNNSSGSSTPATSAGGGIFGSSTSSSNPPVAAFV
FGQVSNPVSSSAFGNCAESSTSQSLLFSQDSKPATTSSTATVVTPFVFGPGASSNSTATS
GFSFGATTTTGSSFVFGTGPPAPSASPAFGANQTPTFGQSQGASQPNPPSFGSISSSTTL
FSAGSQPAPPTFGTVSSSSQPPVFGQQPNQSAFGSGAAPNPSSGFQFGSSTTNFNFTNNN
PSGVFTFGANPSTPAASAQPSGSGGFPFNQPTAGFTVGSNGKNMFSSSGTSVPARKIKTA
VRRKK
NT seq
4338 nt
NT seq
+upstream
nt +downstream
nt
atggcctcgggagccggaggaataggagggggcggtggcggcaagatccggacgcggcgc
tgccaccagaggcccatcaagccttaccagccggggccaccgcaacaccagggcattctt
agcagggttacagaatctgttaagaatattgtgccagggtggctacaaagatatttcaac
aagaatgaagatgcatgtagctgctcaacagaaacaagtgaggttccacactggccagaa
aatagagatgatgatcatgtgatatatggccatgaggagagctctaatattaatgatggg
agaatcacccctgagccagctgtcagtaatacagaagaaccttcgacaacaagtactgct
tccaattatccagatgtattgacaaggccttctcttcaccgtagtcatctgaacttctcc
atgttggaatctccagcgttgcactgtcagccatctacatcctcggcattcccaattggc
agttctggattttcccttgtaaaagaaataaaagattctacctctcagcatgatgatgac
aacatctcaactaccagtggtttttcttcaagagcctctgataaagatatagctgtttca
aagaacacttcattgccacctctgtggtccccagaagctgaacgttctcattcactctct
caacatactgccaccagctcaaaaaaaccagcatttaacttatctgcctttggaacactt
tcctcttcacttgggaattcttcaaatcttaaaacaagtcagcttggagattctcctttt
tatcctggaaaaacaacatatggtggggcagctgctgcaagacagtctaagctacgaaat
acaccttatcaggcaccagtcagaagacagatgaaagctaagcaacttaatgcacaatct
tacggtgtgactagttcaacagctcggcgaatattgcagtctttagagaagatgtcaagt
cctctagcggatgcaaaaagaattccatcagttgtttcttctcctctaaactctcctctt
gataggagcgggatagatatcacagattttcaggccaaaagagaaaaggtggatgctcag
tatccccctgttcagagacttatgaccccaaagccagtttccattgcagcaaatcgaact
gtttattttaaaccatctctgaccccatctggtgaattaagaaaggttaatcaaagaatt
gataaaaaggacagtactggatatgaaaaaaatatgacaccaagacaaaatagagaacaa
gaaagtggcttttcatatccaaatttcagtattcctgcagccaatggtttatcttctgga
gtaggtggtggaggtggcaagatgagacgagagagaacacgctttgttgcttctaaacat
tcagaggagcaggaaatggaagtaccagtattaccgaaaatacccctaccaatcaccggt
tcttcactgcctaccttcaattttagttctccagcaatcacaacttcctctctgtcaccc
atcggtccttctcagtcgttaacaaacaaggtacaaatgacatctccgagcagccctgga
agtcccatgtttagattttcatctccaattgtaaaatctactgaggcagatatactacct
ccatcctctattggatttacatttagtgtgcctgttgcaaaaacagaattttctggctcc
actagtacttcagaaccaagtataagtagttctgctcaagatatcactgtggtgaacagc
acaagctataagaagcgagatgaagattgtgagggcctttttagacctgtaaaaatcctg
aaagaaggaagtgttctagatgttctgaaaagccctggtttcacatcgccaaaggtagat
cctcttgctgctcagtctaccacaacaagcccagtggtttatacaagaccagcaataagt
acattttctttgagtggaattgggtttggggagaatttaaagggtggatcatcatggcag
tgtgatacatgtctactccagaacaaagttacagacaacaagtgcatagcctgtcaagca
gcaaaattgccatcgagggaaactgccaaacaaactggaagtgggacaccaaccaaaagt
ggcaaagcaactctttctgcatcggctacaggctttggagacaaatttaaaccaggaact
tgggattgtgacacctgtttagtgcaaaataaaccggaagcaatgaaatgtgtagcctgt
gaaacaccgaaacctggcactggtgtgaagcgagtgctcacattgacagtggtttcagaa
agtgctgggaccatggctgcgtcatcttccagctgcactgtggcatctggttctttagga
tttggagataaattcaaaaagcctgtggggtcttgggagtgtccagtttgctgtgtttct
aacaatgcagaagacaacaaatgcgtgtcctgtacttctgagaaaccaggaagttcaata
cctgcttcaagtagcagcactgtgtctgtctctctgtcttcgggaggctgcctaggattg
gacaagttcaaaaaacctgagggaagctgggactgtgaagtgtgcctagtccagaataaa
gcagactctagcaagtgtgttgcatgtgaaagtgcaaaaccaggcacgaaagctgagttt
aaaggctttggcacatcatcttcgtctttgaatccatcaactacgtccttcaaatttggt
atcccatcatcttctgggccttgtgtatcatctgactctggatctataaaccccatcagt
gaaggctttaaattttctaaacctactggagattttaaatttggagtttcatcagattct
aaacctgaagaagttaaaaaagacagtaagaatgataattttaaatttggactttcttct
ggttcaagcaacccagcttcatcagcttcatttcagtttggagtgtctaatcttgggcag
caagaaaagaaagaggaactgcctaaatcttcacctgcaggcttcagctttggtacaggt
gttattaaccctacccctgctgctactgaaactgtggtgacctctgagaataagagcagc
ttcagttttggaaccatggaaaccaagagcgtctcagtggctcctttcacttgtaaaatg
accgaagctaaaaaggaagaaatgcctacaaccaagggagggttcacttttggcaacatg
gaaccttcctctctgccttctgcctccatgtttgttttgggaaggacagaagagaagcaa
caagagcccgtcacttctacttctctggtttttgggaagaaagctgacaatgaagagccg
aagtgtcaaccagtgttttcctttgggaattcagagcaaaccaaagatgagagttcttca
aagtcaacatttagtttcagtatgacaaaaccatctgagaaggaatctgatcaaccagca
aagtctacatttgcttttggagctcaaaccaatactacagttgatcaaggagcagcaaag
ccagtttttagtttcttgaacaataattcctctggttcaagtacaccagcaacttcagct
ggtggtggcatatttggtagttccacttcttcctccaatccacctgtggctgcctttgtg
tttggacaggtcagcaatcctgtgagcagctccgcttttggtaactgtgctgaatccagt
acatctcagtctttgctgttttctcaggatagcaaaccagcaaccacatccagcacagct
acagtggttaccccatttgtctttgggccaggagccagcagtaatagtactgcaacctct
ggtttcagctttggagctacaaccactacagggtcctcctttgtatttggcactgggcct
ccagcaccatctgccagtccagcatttggtgctaaccagaccccaacatttggacagagt
caaggtgccagccagcccaatcccccaagctttggatctatatcatcttcaacaacattg
ttttctgctgggtctcagcctgcaccacctacttttggaacagtgtcaagtagcagccag
cctcctgtgtttggacaacagcctaatcagtcagcatttggctctggagcagctcccaat
cccagttccggtttccaatttggcagcagcactacaaatttcaatttcacaaacaacaac
ccatcaggagtgttcacatttggtgcaaatcctagcacgcctgcagcctctgcccagcct
tcaggctcagggggctttccattcaaccagcctacagcaggtttcacagtggggtcaaat
gggaaaaatatgttctcctcttctggaacttcagttcctgctcgcaaaataaagactgct
gttaggcgcaagaaataa
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integrated database retrieval system
