Spermophilus citellus (European ground squirrel): 308651889
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Entry
308651889 CDS
T11988
Symbol
NFASC
Name
(RefSeq) neurofascin
KO
K06757
neurofascin
Organism
scil Spermophilus citellus (European ground squirrel)
Pathway
scil04514
Cell adhesion molecule (CAM) interaction
scil04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
scil00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
308651889 (NFASC)
04517 IgSF CAM signaling
308651889 (NFASC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
scil04515
]
308651889 (NFASC)
Cell adhesion molecules [BR:
scil04515
]
Immunoglobulin superfamily
L1 family
308651889 (NFASC)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
I-set
fn3
Ig_2
ig
Bravo_FIGEY
Ig_VEGFR-1-like_5th
V-set
FN3_DSCAM-DSCAML_C
Ig_5
V-set_CD47
Ig_PDGFR_d4
BiPBP_C
Motif
Other DBs
NCBI-GeneID:
308651889
NCBI-ProteinID:
XP_081155594
LinkDB
All DBs
Position
6:complement(130880819..131056107)
Genome browser
AA seq
1468 aa
AA seq
DB search
MRRLATSGAAGDVGEVAAPAADSSDCARGRSLSPWRLTDLCATWDTGVCFPSTAWSRASS
SVARWGLNEAEELSSAWEAHLEPLKAPRPQGLGSRERGLVLRMARQQPLPWVHAAFLLFF
LSLGGAIEIPMDLTQPPTITKQSVKDHIVDPRDNILIECEAKGNPAPSFHWTRNSRFFNI
AKDPRVSMRRRSGTLVIDFRSGGRPEEYEGEYQCFARNKFGTALSNRIRLQVSKSPLWPK
ENLDPVVVQEGAPLTLQCNPPPGLPSPVIFWMSSSMEPITQDKRVSQGHNGDLYFSNVML
QDMQTDYSCNARFHFTHTIQQKNPFTLKVLTNHPYNDSSLRNHPDMYSARGVAERTPSFM
YPQGTSSSQMVLRGMDLLLECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITNVS
EEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPT
VQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLD
VPPRMLSPWNQFIRVILYNRTRLDCPFFGSPIPTLRWFKNGQGSNLDGGNYHVYENGSLE
IKMIRKEDQGIYTCVATNILGKAENQVRLEVKDPTRIYRMPEDQVAKRGTTVQLECRVKH
DPSLKLTVSWLKDDEPLYIGNRMKKEDDSLTIFGVAERDQGSYTCVASTELDQDLAKAYL
TVLADQATPTNRLAALPKGRPDRPRDLELTDLAERSVRLTWIPGDDNNSPITDYVVQFEE
DQFQPGVWHDHSKFPGSVNSAILQLSPYVNYQFRVIAVNEVGSSHPSLPSERYRTSGAPP
ESNPSDVKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWRRRETRETWNNVTVWGSRYV
VGHTPVYVPYEIRVQAENDFGKAPEPDTIIGYSGEDYPRAAPTEVKIRVLNSTAISLQWN
RVYSDTVQGQLREYRAYYWRESSLLKNLWVSQKRQQASFPGDRPRGVVSRLFPYSNYKLE
MVVVNGRGDGPRSETKEFTTPEGVPSAPRRFRVRQPNLETINLEWDHPEHPNGILIGYTL
KYVAFNGTKVGKQMVENFSPNQTKFSMQRADPVSRYRFTLSARTQVGSGEAVTEESPAPP
NEATPTAAPPTLPPTTEGATGAVSSTDATALAAATEATTVPIIPTVAPTTIATTTTTTTT
TTTTTVATTTTTTAATTTESPPTTTTTGTKIQESAPDEQSIWNVTVLPNSKWANITWKHN
FGPGTDFVVEYIDSNHTKKTVPVKAQAQPIQLTDLYPGMTYTLRVYSRDNEGISSTVITF
MTSTAYTNNQADIATQGWFIGLMCAIALLVLILLIVCFIKRSRGGKYPVREKKDVPLGPE
DPKEEDGSFDYSDEDNKPLQGSQTSLDGTIKQQESDDSLVDYGEGGEGQFNEDGSFIGQY
TVKKDKEETEGNESSEATSPVNAIYSLA
NT seq
4407 nt
NT seq
+upstream
nt +downstream
nt
atgcggcggctggcgacgagcggcgctgcaggggacgtgggggaagtggcggcgccggca
gcggacagctcggactgcgcccggggccggagcctgagcccttggaggttgactgactta
tgtgcaacctgggacactggagtgtgctttccctccacagcctggagccgagcctcctcc
agtgttgcgaggtgggggctgaatgaggcagaggagctgagctctgcctgggaggcccac
ttagagccactcaaggcaccaagaccccaagggctggggagcagggagcggggcctggtg
ctgaggatggccaggcaacagccgctgccctgggtccacgcagccttcctcctcttcttc
ctcagtctgggcggagccatcgagattcctatggacctgacccagcccccaaccatcacc
aagcagtcagtgaaagaccacatcgtggacccccgtgataacatcctgattgagtgtgaa
gcaaaggggaaccctgcccccagcttccactggactcgaaacagcagattcttcaacatt
gccaaggaccctcgggtgtccatgaggaggagatctgggaccctggtgatcgacttccgc
agtggtgggcggcctgaggagtacgagggcgaataccagtgcttcgcccgcaacaaattt
ggcacagccttgtccaacaggatccgtctgcaagtgtccaaatctcccctgtggcccaag
gaaaatctggaccccgttgtggtccaagaaggcgccccgctgacgctgcagtgcaacccc
ccacctggcctgccatccccagtcatcttctggatgagcagctccatggagcccatcacc
caggacaaacgcgtctcccagggccacaacggggacctgtatttctctaatgtgatgctg
caggacatgcagactgactacagctgcaatgcccgcttccacttcacccacaccatccag
cagaagaatcccttcaccctcaaggtcctcaccaaccacccctataatgactcgtcctta
agaaaccaccctgacatgtacagtgcccgaggagttgcagagagaacacccagcttcatg
tatccccagggtacctcgagcagccagatggtgctccgcggcatggacctcctgctagag
tgcatcgcttctggggtcccaacaccagacatcgcatggtacaagaaaggtggggacctc
ccatctgacaaggccaagtttgagaactttaacaaggctctgcgtatcaccaatgtgtcc
gaggaagactctggggagtatttctgcctggcctccaacaagatgggcagcatccggcac
acgatctcggtgagagtgaaggctgctccctactggctggatgaacccaagaacctgatc
ctggctcctggtgaggatgggaggctggtgtgtcgagccaatgggaaccccaagcccact
gtccagtggatggtgaacggggaacctttgcaatcggcaccacccaacccaaaccgtgag
gtggcaggcgacaccatcatcttccgagacacccagatcagcagcagggccgtgtaccag
tgcaacacctccaacgagcacggctacctcctggccaacgccttcgtcagtgtgctggat
gtcccacctcggatgctctcaccctggaaccagttcattagagttattctttacaaccgg
acacggctggactgcccgttctttgggtctcccattcccacactgcgatggtttaagaat
gggcaaggaagcaacctggatggtggcaattaccatgtctatgagaatggcagtctggaa
attaagatgatccgcaaagaggaccaaggcatctacacctgtgtggccaccaacatcctg
ggcaaagcggaaaaccaagtccgcctggaggtcaaagatcccaccaggatctaccggatg
cccgaggaccaggttgccaagaggggcaccacggtacagctggagtgtcgcgtgaagcac
gacccctccctgaagctcaccgtctcctggctgaaggatgatgagccgctctatattgga
aacaggatgaagaaggaagacgactcgctgaccatctttggtgtggcagagcgggaccag
ggcagttatacgtgcgtcgccagcacggagctggaccaagatctggccaaggcctacctc
accgtgctggctgatcaggccactccaactaaccgtttggctgccctgcccaaaggacgg
ccagaccgaccccgggacctggagcttaccgacctggccgagaggagtgtgaggctgacc
tggatcccgggggatgataacaacagccccatcacagactatgtggtccagtttgaagag
gaccagttccaaccaggggtctggcatgaccattccaagttcccaggcagtgtcaactcc
gctatcctccaactgtccccatatgtcaactaccagttccgggtcattgctgtgaacgag
gtcgggagcagccaccccagcctcccatccgagcgctaccgaaccagtggagcacctcct
gagtccaaccccagtgatgtaaagggagaaggaaccagaaagaacaacatggaaatcacg
tggacacccatgaatgccacctctgcttttggccccaacctgcgctacattgtcaagtgg
cggcggagagagactcgagagacctggaacaacgtcactgtgtggggctctcgctatgtg
gtggggcatacccctgtctatgtgccctatgagatccgggtccaggctgaaaatgacttt
gggaaggcccccgagcccgacaccatcatcgggtactccggagaagattatcccagggct
gcacccaccgaagttaaaatccgagtcctgaacagcacggccatcagccttcagtggaac
cgcgtctactccgacacggtccagggccagctcagggagtaccgagcctactactggagg
gagagcagcttgctgaagaacctgtgggtatcccagaagagacagcaggccagcttccct
ggagaccgtccccggggtgtggtgtcccgcctcttcccctacagtaactacaagctggag
atggttgtggtgaatgggagaggcgacgggccccgcagcgaaaccaaggagtttactacc
ccggaaggagtacccagtgcccccaggcgtttccgagtccggcagcccaacctggagaca
atcaacctggagtgggatcatccggaacaccccaatgggatcctgattggatacaccctc
aaatacgtggcctttaatggaactaaagtaggaaagcagatggtggaaaacttctctccc
aatcagaccaagttctccatgcagagagcagaccctgtgtcacgctaccgctttaccctc
agcgccaggacgcaggtgggctccggggaagcagtcacagaggagtctccagcgcccccg
aatgaagctactccaactgcagctcctcccacgttgcccccaactaccgagggcgccaca
ggcgctgtgagcagtactgatgctactgcccttgccgccgccaccgaagccacaacagtc
cccatcatcccaactgtggcgcctaccaccatcgccaccaccaccaccaccaccaccacc
accaccaccaccaccgtcgccacaactactacaaccactgccgccaccaccacggagagt
cctcccaccaccaccaccaccgggactaagatacaggaatccgcccccgatgagcagtcc
atatggaacgtcacggtgctccccaacagtaaatgggccaacatcacctggaagcacaat
tttgggcccggaactgactttgtggttgagtacatcgacagcaaccatacgaaaaaaact
gtccctgttaaggcccaggcccagcctatacaactgacagacctctatcctgggatgacg
tacacattgagggtttattcccgggacaacgagggcatcagcagtaccgtcatcaccttt
atgaccagtacagcttacaccaacaaccaggcggacatcgccacccagggctggttcatt
gggctcatgtgcgccatcgccctcctggtgctgatcctgctcatcgtctgcttcatcaag
aggagtcgcggtggcaagtacccagtgcgagaaaagaaggacgttccccttggccctgaa
gaccccaaagaagaggatggctcctttgactacagtgatgaggacaacaagcccctgcag
ggcagccagacgtctctggatggaaccatcaagcagcaggaaagtgacgacagcctggtg
gactatggggaaggcggcgaagggcagttcaatgaagatggctccttcattggccagtac
acggtcaaaaaggacaaggaggaaacagagggcaacgagagctcagaggccacatcaccc
gtcaatgccatctattctctggcctaa
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integrated database retrieval system
