Spermophilus citellus (European ground squirrel): 308653197
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Entry
308653197 CDS
T11988
Symbol
RFC4
Name
(RefSeq) replication factor C subunit 4 isoform 1
KO
K10755
replication factor C subunit 2/4
Organism
scil Spermophilus citellus (European ground squirrel)
Pathway
scil03030
DNA replication
scil03410
Base excision repair
scil03420
Nucleotide excision repair
scil03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
scil00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
308653197 (RFC4)
03410 Base excision repair
308653197 (RFC4)
03420 Nucleotide excision repair
308653197 (RFC4)
03430 Mismatch repair
308653197 (RFC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
scil03032
]
308653197 (RFC4)
03036 Chromosome and associated proteins [BR:
scil03036
]
308653197 (RFC4)
03400 DNA repair and recombination proteins [BR:
scil03400
]
308653197 (RFC4)
DNA replication proteins [BR:
scil03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
308653197 (RFC4)
DNA Replication Termination Factors
ELG1-RFC complex
308653197 (RFC4)
Chromosome and associated proteins [BR:
scil03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
308653197 (RFC4)
DNA repair and recombination proteins [BR:
scil03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
308653197 (RFC4)
Check point factors
HRAD17(Rad24)-RFC complex
308653197 (RFC4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
RCF1-5-like_lid
AAA_lid_RFC1
Rad17
AAA_assoc_2
AAA_16
AAA_22
DUF815
AAA_11
AAA_30
Mg_chelatase
AAA_24
SLFN-g3_helicase
AAA_28
RuvB_N
AAA_23
AAA_5
AAA_19
ResIII
Gp44_lid
Viral_helicase1
AAA_7
Motif
Other DBs
NCBI-GeneID:
308653197
NCBI-ProteinID:
XP_081157907
LinkDB
All DBs
Position
7:120471011..120487144
Genome browser
AA seq
364 aa
AA seq
DB search
MQAFLKGTSISTKPPLTKDRGVAATAGSSGENKKVKHVPWVEKYRPKCVDEVAFQEEVVA
VLKKSLEGADLPNLLFYGPPGTGKTSTILAAARELFGPELFRLRVLELNASDERGIQVVR
EKVKNFAQLTVSGSRSDGKPCPPFKIVILDEADSMTSAAQAALRRTMEKESKTTRFCLIC
NYISRIIEPLTSRCSKFRFKPLSDKTQQQRLLDIAEKENVKISNEGIAYLVKVSEGDLRK
AITFLQSATRLTGGKEIMEKVITDIAGVIPAEAIDGIFAACQSGSFDKLEAVVKELIDEG
HAATQLINQLHDVVVENDNLSDKQKSIITEKLAEVDKCLADGADEHLQLIGLCATLMQQL
TQNC
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcatttctaaaaggcacatctatcagtactaaaccaccattaaccaaggatcga
ggagtagctgccactgcagggagcagtggtgagaacaagaaagtcaaacatgttccatgg
gtggaaaaatatcgcccaaaatgtgtagatgaagttgctttccaagaagaagtagttgca
gtgttgaaaaaatctttagaaggagctgatctacctaatctcttgttttatgggccacct
ggaactgggaagacatccaccattttggcagctgctagagaactctttgggcctgaacta
tttcgattaagagttcttgagttaaatgcatctgatgaacgtggaatacaagtagttcga
gagaaggtgaaaaattttgctcaattaactgtgtcaggaagtcgttcagatgggaagcca
tgtcctccttttaagattgtaattttggatgaagctgattccatgacctcagctgctcag
gcagctttaagacgaactatggagaaagaatctaaaaccacacgtttctgtctcatctgt
aactatattagtagaataattgaacccttgacctctagatgttcaaaattccgcttcaag
cctttatcagataaaactcaacagcagcgattactagacattgctgagaaggaaaatgtc
aaaattagtaatgagggaatagcttatctagttaaagtatcagagggagacttaaggaaa
gccattacatttcttcaaagtgctactcgattaacaggtggaaaggaaatcatggaaaaa
gtgatcacagacattgctggggttataccagctgaggcaattgatggaatatttgctgca
tgtcagagtggctcctttgataaactggaagctgtagtgaaggaattgatagatgagggt
catgcagccactcaacttataaatcaactccatgatgtggttgtagaaaatgataacctt
tctgacaaacagaagtccatcattacagaaaagcttgcggaagttgacaaatgcttagca
gatggcgctgatgaacacctgcaattgattggcctgtgtgcaaccctgatgcagcaattg
actcagaactgttga
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integrated database retrieval system
