Spermophilus citellus (European ground squirrel): 308653273
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Entry
308653273 CDS
T11988
Symbol
GABRA6
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-6
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
scil Spermophilus citellus (European ground squirrel)
Pathway
scil04080
Neuroactive ligand-receptor interaction
scil04082
Neuroactive ligand signaling
scil04519
Cadherin signaling
scil04723
Retrograde endocannabinoid signaling
scil04727
GABAergic synapse
scil04742
Taste transduction
scil05032
Morphine addiction
scil05033
Nicotine addiction
Brite
KEGG Orthology (KO) [BR:
scil00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
308653273 (GABRA6)
04082 Neuroactive ligand signaling
308653273 (GABRA6)
04519 Cadherin signaling
308653273 (GABRA6)
09150 Organismal Systems
09156 Nervous system
04727 GABAergic synapse
308653273 (GABRA6)
04723 Retrograde endocannabinoid signaling
308653273 (GABRA6)
09157 Sensory system
04742 Taste transduction
308653273 (GABRA6)
09160 Human Diseases
09165 Substance dependence
05032 Morphine addiction
308653273 (GABRA6)
05033 Nicotine addiction
308653273 (GABRA6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
scil04040
]
308653273 (GABRA6)
Ion channels [BR:
scil04040
]
Ligand-gated channels
GABA-A
308653273 (GABRA6)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
CytochromB561_N
Motif
Other DBs
NCBI-GeneID:
308653273
NCBI-ProteinID:
XP_081158013
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All DBs
Position
1:complement(131852410..131868385)
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AA seq
461 aa
AA seq
DB search
MGISVNRRVVLLLPWLYIILWLENALGKLEDEVNFYPENISRILDNLLEGYDNRLRPGFG
GAVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWTDERLKFGGPTEILSLNNLMVSKIW
TPDTFFRNGKKSIAHNMTTPNKLFRIMQNGTILYTMRLTINADCPMRLVNFPMDGHACPL
KFGSYAYPKSEIIYTWKKGPLYSVEVPEESSSLLQYDLIGQTVSSETIKSNTGEYVIMTV
YFHLQRKMGYFMIQIYTPCIMTVILSQVSFWINKESVPARTVFGITTVLTMTTLSISARH
SLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFTNLQSQKAKRKAQLAAQSPVTISKA
AEPLEAEIVVHSDSKYHLKKRVTSLTLPIVPSTKGNKVLTSTPILQPTPVTPPPLSPTFG
GTSKIDQYSRILFPVAFAGFNLVYWIVYLSKDTMEVSSRVE
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgggcatttcagtgaaccgtagggtggtgttacttttgccctggctatacattattcta
tggttagaaaatgctctgggtaaactggaagatgaagtcaacttctacccagaaaacatc
agtcggatcctggacaacttgcttgaaggctatgacaatcggctacggccgggatttgga
ggtgctgtcactgaagtcaaaacggacatttatgttaccagttttggacccgtgtcagat
gtggagatggagtatacaatggatgttttcttccgccagacctggaccgatgagaggttg
aagttcgggggccctactgagattctgagtttaaataatctgatggtcagtaaaatctgg
acacctgacacttttttcaggaatggcaaaaagtcaattgctcacaacatgacgacccct
aataaactcttcagaataatgcaaaatggaacaattctctacaccatgaggcttaccatc
aatgctgactgtcccatgaggctggttaactttcctatggatgggcatgcttgtccactc
aagtttgggagttatgcttaccccaaaagtgaaatcatatatacatggaaaaaaggacca
ctttactcagtagaagtcccagaagaatcttctagtctcttgcagtatgatttgattgga
caaacagtgtctagtgaaacaattaaatctaacacaggtgaatacgtaataatgacggtt
tatttccacttgcaaaggaagatgggctacttcatgatacagatatacactccctgcatt
atgacagtcattctttcccaggtgtctttctggattaataaggagtcagtaccagcaaga
actgtctttggtatcactactgttttaacgatgaccactttaagcatcagtgctaggcac
tccttgcccaaggtatcatatgcaactgccatggattggttcatagctgtgtgctttgct
ttcgtcttttctgctctcattgagtttgcagctgtcaactacttcaccaacctacagtca
cagaaggccaaaaggaaggcacagcttgcagctcaatctccagtgacaatatcaaaggca
gcagaacccttggaagcagagattgttgtgcattctgattccaagtaccatctgaaaaaa
agagtcacctcgctgactttgccaatagttccatccaccaaggggaacaaagtccttacc
agcacacccatcctacagccaacacctgtcaccccaccaccactctcaccaacctttggg
ggcaccagtaagatagaccagtattctcgaattcttttcccagttgcatttgcaggattc
aatcttgtctactggatagtttatctttccaaagatacaatggaagtgagtagcagggtc
gaatag
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