KEGG   Spermophilus citellus (European ground squirrel): 308653907
Entry
308653907         CDS       T11988                                 
Symbol
LOC308653907
Name
(RefSeq) DNA-directed RNA polymerases I, II, and III subunit RPABC4-like
  KO
K03009  DNA-directed RNA polymerases I, II, and III subunit RPABC4
Organism
scil  Spermophilus citellus (European ground squirrel)
Pathway
scil03020  RNA polymerase
scil03420  Nucleotide excision repair
scil04623  Cytosolic DNA-sensing pathway
scil05016  Huntington disease
Brite
KEGG Orthology (KO) [BR:scil00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    308653907 (LOC308653907)
  09124 Replication and repair
   03420 Nucleotide excision repair
    308653907 (LOC308653907)
 09150 Organismal Systems
  09151 Immune system
   04623 Cytosolic DNA-sensing pathway
    308653907 (LOC308653907)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05016 Huntington disease
    308653907 (LOC308653907)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:scil03021]
    308653907 (LOC308653907)
   03400 DNA repair and recombination proteins [BR:scil03400]
    308653907 (LOC308653907)
Transcription machinery [BR:scil03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     308653907 (LOC308653907)
  RNA polymerase III system
   RNA polymerase III
     308653907 (LOC308653907)
  RNA polymerase I system
   RNA polymerase I
     308653907 (LOC308653907)
DNA repair and recombination proteins [BR:scil03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      308653907 (LOC308653907)
SSDB
Motif
Pfam: Zn_ribbon_RPAB4 MCM_OB DmmA-like_C A2L_zn_ribbon HypA DUF5816 Cytochrome_C7 DZR Zn_ribbon_13 NCD3G
Other DBs
NCBI-GeneID: 308653907
NCBI-ProteinID: XP_081158811
LinkDB
Position
7:complement(28634855..28635495)
AA seq 58 aa
MDTQKDVQPPKQQPMIYTCGECHTENEIKSRDPIRCRECGYRIMYKKRTKRLVVFDAR
NT seq 177 nt   +upstreamnt  +downstreamnt
atggacactcagaaggacgttcaacccccaaagcagcagccaatgatctatacctgtgga
gaatgtcacacagaaaatgaaataaaatccagggatccaatcagatgcagagaatgtgga
tacagaataatgtacaagaaaagaactaaaagattggtggtttttgatgctcgatga

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