Spermophilus citellus (European ground squirrel): 308654584
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Entry
308654584 CDS
T11988
Symbol
LOC308654584
Name
(RefSeq) DNA polymerase nu isoform 1
KO
K16618
DNA polymerase nu [EC:
2.7.7.7
]
Organism
scil Spermophilus citellus (European ground squirrel)
Pathway
scil03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
scil00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
308654584 (LOC308654584)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
scil03400
]
308654584 (LOC308654584)
Enzymes [BR:
scil01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
308654584 (LOC308654584)
DNA repair and recombination proteins [BR:
scil03400
]
Eukaryotic type
TLS (translesion DNA synthesis) factors
A-family DNA polymerase
308654584 (LOC308654584)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_A
DNA_pol_P_Exo
Motif
Other DBs
NCBI-GeneID:
308654584
NCBI-ProteinID:
XP_081160321
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All DBs
Position
8:complement(1428861..1623687)
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AA seq
882 aa
AA seq
DB search
MENCETYVGFDLSKIPLSTIARKIMCALHSGDLVDSKNWGESTKRSNPGTCTCETSAVLL
SHNSSPFVKPINKSSVKDAVILKEGKNQSLEKKNPKSLTGQTSRGSTKPSPHSSSTGLTG
QLPADQKQKNISSLASSRCSVPHCDQEASDLQKMEHKKKHFLNENINNENKESMNLKRKH
IMYSKSSEKISKYLALEENTGEVKAQLNSGDSRTFKKYLCDIRYLDDQSKNQLMEMLKQA
AALVVTLMYKDGSTQLIADQAQTSSVKGIVMLLKSQVDNLETLACGALEVGFMSQGQCIY
IHTELSSLWGQEQEAYHLFARNVLFQTLRCKCPVICFNAKDFVRIVLQFIGDDGSWKHVS
DFVGLDPRIAAWLIDPSDGTPSFEDLVAKHLEKSFSVKVSSTCGNASSNIKNKNIHMNLN
TLYRLTMDLCSKLKVHGLWQLFCTLEIPLIPILAVMENHKIQVNKEEMERTSILLGARLK
ELEQEAHFIAGERFLIMSNNQLREILFGKLKLHLLSPRKSLPKTGPQQHLSTSEAVLSSL
QDLHPLPKTILEYRQIHKIKSTFIDGLLACMKKGSISSKWNQTGTVTGRLSATHPNIQGI
SKHSIQIAKPLNFKGKEDETFTISPRTLLVSSRGHIFLAADFSQIELRILAHLSGDPELL
KLFQESERDDVFSTLASQWKDIPMEHVTYADREQTKKVVYSMVYGAGKERLAACLGITVR
EATQFLESFLQKYKKIKDFSQAAIDQCYHTGYVASIMGRRRPLPRIRARDQQLRAQAERQ
AVNFMVQGSAADLCKMAMIRIFSAVATSPTLTARLVAQIHDELLFEVEDTQVPEFTALVR
GTMESLQQIQDLELQLQVPLKVSLSAGRSWGHLVPLQEALDS
NT seq
2649 nt
NT seq
+upstream
nt +downstream
nt
atggaaaattgtgagacctatgtaggctttgatctctctaagataccactctccactatt
gctcggaagattatgtgtgctctgcattcaggtgatttagtggattctaagaactgggga
gagagtacaaagagatcgaacccagggacctgcacatgcgagacgagtgctgtactgctg
agccataactccagcccctttgtaaaaccaataaacaaatccagtgttaaggatgcagta
atacttaaagaggggaagaaccaatcactagagaaaaagaatcctaaatctttaacaggc
cagacgtcaagaggttccaccaagccttctcctcattcctccagtactgggctcacaggt
cagctgcctgctgatcaaaagcagaaaaacatcagttcattggcttcttccaggtgttct
gttccacattgtgatcaagaggcttcagacctacagaaaatggagcataagaaaaagcat
ttcctaaatgaaaatattaataatgaaaataaggaaagcatgaatcttaaaagaaaacat
attatgtatagtaaatcatcagagaaaataagtaaatacttggcattggaagaaaacact
ggtgaggttaaagcacagctaaattctggggactcaagaacctttaaaaaatacctttgt
gatattaggtatttggatgatcagtcaaaaaaccagctgatggaaatgctcaagcaggca
gctgcactggtagtgactctaatgtataaggatggttccacccagctaatagctgaccag
gctcaaacttcctctgttaaaggaattgtgatgttactaaagagtcaagtggacaaccta
gagaccttagcctgtggtgctcttgaggtgggctttatgtcccagggtcagtgtatctac
atacacacagagctttcctctctctggggccaagaacaagaagcatatcatctgtttgcc
agaaacgtgctgttccaaaccctgagatgtaaatgccctgttatttgtttcaacgctaag
gactttgttagaatagtgctgcagtttattggtgatgatggcagttggaagcatgtttct
gattttgtaggccttgatcccagaattgccgcatggctcatagatcccagtgatggcaca
ccttcttttgaggacttagtggcaaaacaccttgaaaagtccttttcagtcaaagtgagc
agcacatgtggcaatgcctcaagtaatattaagaataagaacatacatatgaacttgaat
acactctacagacttacaatggacctgtgctccaagttgaaggttcatggtttatggcaa
ctattttgtactttggaaattcctctgattccaattttagcagtgatggaaaaccacaag
attcaggtgaacaaggaagaaatggagaggacatccatacttcttggggctcgtctcaag
gaactggagcaggaagcccattttattgcaggagaacggtttcttataatgagtaataat
caacttcgagaaatcctctttggaaagttgaagctacacctgctgagtccaaggaagagc
cttcccaaaacagggccacagcaacacctgtccacttcagaggctgtgttaagttctctg
caagaccttcatcccttacccaagacaattttggaatacaggcagattcacaagatcaag
tcaacctttatagatggattattagcttgcatgaaaaagggatccatttcctccaagtgg
aatcaaacaggaactgtgacgggaagactttcagccacacatcctaatatccagggtatt
tccaagcactcaattcaaattgctaagcctctgaattttaaaggtaaagaagatgagact
ttcaccatctccccaagaaccctgcttgtttcctccaggggccacatcttcctagcagca
gacttttcacagattgaattgcgcattcttgcgcatttatctggagatccagaacttttg
aagttattccaggaatctgaaagagatgatgtgttttctaccctggcttcacagtggaag
gacattcccatggagcatgtgacgtatgcagatagagagcagaccaagaaggtggtgtac
tccatggtctatggagcagggaaggagcggcttgctgcttgccttggaattactgttcgg
gaagccacccagtttttggagagctttttgcagaagtacaagaaaatcaaagacttctcg
caagcagctattgaccagtgttatcacacaggctatgtggcatccatcatgggcagaagg
aggcctctgcccaggatccgtgcacgggaccagcagctccgggcacaagcagaacgacag
gcagtgaacttcatggtgcaaggctctgctgcagacctctgtaagatggccatgatccgc
atcttctctgcagtagccacttcccccaccctgacggccaggttggttgcccaaattcac
gatgagctgctgtttgaagtggaagacacacaggtccccgagttcacagctcttgtcagg
ggaaccatggagtccttgcaacagattcaggacctggagctgcaactgcaggtgccccta
aaggtgagcctgagcgccggccgttcctggggacacctggttccactgcaggaggccctg
gactcttag
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