Spermophilus citellus (European ground squirrel): 308656018
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Entry
308656018 CDS
T11988
Symbol
WDTC1
Name
(RefSeq) WD and tetratricopeptide repeats protein 1 isoform 1
KO
K11807
WD and tetratricopeptide repeats protein 1
Organism
scil
Spermophilus citellus (European ground squirrel)
Brite
KEGG Orthology (KO) [BR:
scil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
scil04121
]
308656018 (WDTC1)
Ubiquitin system [BR:
scil04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
308656018 (WDTC1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40_Prp19
WD40
WD40_CDC20-Fz
Beta-prop_IFT122_1st
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WD40_Gbeta
Beta-prop_EML_2
EIF3I
Beta-prop_WDR3_2nd
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_EML
Beta-prop_WDR36-Utp21_2nd
Beta-prop_NOL10_N
Beta-prop_WDR75_1st
TPR_19
DSE1_N
TPR_1
TPR_2
TPR_17
ANAPC4_WD40
WD40_RFWD3
PAC11
Beta-prop_WDR90_POC16_2nd
Beta-prop_SPT8
TPR_11
Beta-prop_HPS5
TPR_16
Beta-prop_WDR41
Beta-prop_Aladin
ANAPC3
Beta-prop_EIPR1
TPR_14
Beta-prop_WDR35_TULP_N
TPR_6
ASA1
TPR_BSK1_C
NBCH_WD40
Beta-prop_WDR19_1st
Beta-prop_VPS8
CFAP70_TPR_C
Barstar
Motif
Other DBs
NCBI-GeneID:
308656018
NCBI-ProteinID:
XP_081162751
LinkDB
All DBs
Position
9:complement(120010260..120076223)
Genome browser
AA seq
683 aa
AA seq
DB search
MAKVNITRDLIRRQIKERGALSFERRYHVTDPFIRRLGLEAELQGHSGCVNCLEWNEKGD
LLASGSDDQHTIVWDPLHHKKLLSMHTGHTANIFSVKFLPHAGDRILITGAADSKVHVHD
LTVKETIHMFGDHTNRVKRIATAPMWPNTFWSAAEDGLIRQYDLRENSKHSEVLIDLTEY
CGQLVEAKCLTVNPQDNNCLAVGASGPFVRLYDIRMIHNHRKSMKQSPSAGVHTFCDRQK
PLPDGAAQYYVAGHLPVKLPDYNNRLRVLVATYVTFSPNGTELLVNMGGEQVYLFDLTYK
QRPYTFLLPRKCHSSGEVQNGKMSTNGVSNGVSNGLHLHSNGFRLPESRGHISPQVELPP
YLERVKQQANEAFACQQWTQAIQLYSKAVQRAPHNAMLYGNRAAAYMKRKWDGDHYDALR
DCLKAISLNPCHLKAHFRLARCLFELKYVAEALECLDDFKGKFPEQAHSSACDALGRDIT
AALFSKNDGEEKKGAGGGGGGGGGGPVRLRSTSRKDSISEDEMVLRERSYDYQFRYCGHC
NTTTDIKEANFFGSNAQYIVSGSDDGSFFIWEKETTNLVRVLQGDESIVNCLQPHPSYCF
LATSGIDPVVRLWNPRPESEDLTGRVVEDMEGASQANQRRMNADPLEVMLLNMGYRITGL
SSGGAGASDDEDSSEGQVQCRPS
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagtcaacattactagagacctcatccgtaggcagatcaaggagcgaggtgcc
ctgagctttgaacggcgctaccatgtcactgatccctttatccggcggctgggcctggaa
gcagagctgcagggtcactcaggatgtgtcaattgtctggagtggaatgagaaaggagac
ttgctggcctctggttctgatgaccagcacacgattgtgtgggacccgctgcaccacaag
aagctgctctccatgcatacaggacacactgcaaatatcttctctgtcaagttcctgcct
catgctggggaccgcatcttgatcacgggagcagctgactccaaggtgcatgtccatgac
ctgacagtaaaggagactatccacatgtttggagatcacacaaaccgggtgaagcgcatc
gccacagcacccatgtggcccaacacgttctggagtgctgctgaggatgggcttatccgc
cagtatgaccttcgggagaacagcaaacactcggaggtgctgattgacctgacagagtat
tgtggccagctggtggaggccaagtgcctcacagtcaatccccaggacaacaactgcctg
gctgtaggggccagtgggcccttcgtgaggctctacgacattcgcatgatccataaccat
agaaagagcatgaagcagagcccatcagcaggtgtacacaccttctgtgaccggcagaag
ccccttccagatggtgcagcccagtattatgtagcaggtcacctgccagtgaagctgcct
gactataacaaccgtctgagagtgctggttgccacctatgtgaccttcagccccaatggc
acagagctgctagtcaacatgggaggtgaacaggtctatttgtttgacttgacttacaag
cagcggccatacaccttcctcttgcctagaaaatgccactcctcaggggaagtccagaac
ggcaagatgtctaccaatggtgtgtccaacggcgtgtctaatggcctgcaccttcacagc
aacggcttccgactgccagaaagtagggggcatatcagcccccaggtggagctgccccca
tatctggagcgtgtgaagcagcaagccaatgaggcttttgcctgccagcagtggacccag
gccattcagctttacagcaaggctgtgcagagggcccctcataatgccatgctctatgga
aaccgagctgctgcctacatgaagcgcaagtgggacggtgaccactatgatgccctaagg
gactgcctcaaggccatatccctaaacccatgccacctgaaggcacacttccgcctggcc
cgctgcctctttgagctcaagtatgtggctgaggccctggagtgcctagacgacttcaaa
gggaagttcccggagcaggcccacagcagcgcttgtgatgctctgggccgtgacatcaca
gctgccctcttctccaaaaatgatggcgaagagaagaagggagctggtggtggtggtggt
ggtggtggtggtggcccagtccgcctccgaagcacaagccgcaaagactccatctcagaa
gatgagatggtcctacgggaacgaagctatgactatcagttccgctactgtggccactgc
aacaccacaacagatatcaaggaggccaatttctttggcagcaacgctcagtacatcgtc
agtggctctgacgatggctccttcttcatctgggaaaaggagaccaccaacctagtgcgc
gtgcttcagggggatgagtccatcgtcaattgcctgcagccgcatcccagctactgcttc
ctggccaccagtggcatcgatcctgtcgtgcgactctggaacccccgaccagagagtgaa
gacctcaccggccgagttgtagaagacatggagggtgcttctcaggccaaccagcggcgc
atgaatgcggaccccttggaggtgatgctgctcaacatgggctaccggatcacaggcctg
agcagcgggggcgccggggcctctgatgatgaggacagctccgagggtcaggtgcaatgc
cggcccagctag
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