Spermophilus citellus (European ground squirrel): 308656246
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Entry
308656246 CDS
T11988
Symbol
RORC
Name
(RefSeq) nuclear receptor ROR-gamma isoform 1
KO
K08534
RAR-related orphan receptor gamma
Organism
scil Spermophilus citellus (European ground squirrel)
Pathway
scil04659
Th17 cell differentiation
scil04710
Circadian rhythm
scil05321
Inflammatory bowel disease
Brite
KEGG Orthology (KO) [BR:
scil00001
]
09150 Organismal Systems
09151 Immune system
04659 Th17 cell differentiation
308656246 (RORC)
09159 Environmental adaptation
04710 Circadian rhythm
308656246 (RORC)
09160 Human Diseases
09163 Immune disease
05321 Inflammatory bowel disease
308656246 (RORC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
scil03000
]
308656246 (RORC)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
scil03310
]
308656246 (RORC)
Transcription factors [BR:
scil03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
308656246 (RORC)
Nuclear receptors [BR:
scil03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
308656246 (RORC)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
308656246
NCBI-ProteinID:
XP_081163231
LinkDB
All DBs
Position
9:complement(3500615..3523823)
Genome browser
AA seq
536 aa
AA seq
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MDRAPQRRHRASRGKRPLALQAGGRACQEEGRELLAAKKTHTSQIEVIPCKICGDKSSGI
HYGVITCEGCKGFFRRSQQCNVAYSCSRQQNCPIDRASRNRCQHCRLQKCLALGMSRDAV
KFGRMSKKQRDSLHAEVQKQLQQQQQQREQVVKTPPAGGRGADALTYTSGIPDGQLPLGA
SPDLPEASACPPGLLRASGSGPSYSSHLAKAELSGTSFHLEYSPEQGKAEGGEGIYSTGG
QLAPGRGGLHFEGPRHPGLGEPGQGPDGYYSPSFHSLPEAPYASLTEIEHLAQNVCKSYR
ETCQLRLEDLLRQRTSLFSREEVTSYQRKSMWEMWERCAHRLTEAIQYVVEFAKRLSGFM
ELCQNDQIVLLKAGAMEVVLVRMCRAYNAENHTVFFEGKYGGVELFRALGCSELISSIFD
FSHSLSALRFSEDEIALYTALVLINANRPGLQDKRKVEQLQYNLELAFHHHLCKTHRQGI
LAKLPPKGKLRSLCSQHVEKLQVFQHLHPIVVQAAFPPLYKELFSTETESPAGLSK
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atggacagggccccacagagacgccaccgagcctcacggggtaagaggcccctggccctg
caggcaggtggaagggcctgccaggaggagggcagagagctactggctgcaaagaagacc
catacttcacaaatcgaagtaatcccttgcaaaatctgtggggacaagtcatcggggatc
cactacggggtcatcacctgcgaggggtgcaagggcttcttccgccggagccagcagtgc
aacgtggcctactcctgctcccggcagcagaactgccccatcgaccgtgccagccgcaac
cgatgccagcactgccgcctgcagaagtgcctggcgctgggcatgtcccgagacgccgtc
aagttcggccgcatgtccaagaaacagagggacagcctccatgcagaagtgcagaagcaa
ctgcagcagcagcagcagcaacgggaacaagtggtcaagacccctccagcagggggtcgt
ggagcagatgccctcacctacacctcggggatcccggacgggcagctgcctctcggcgct
tcacctgacctgcccgaggcctccgcctgtccccccggcctcctgagagcctctggctct
gggccgtcgtattccagccacttggccaaggcagagctcagtgggacctccttccacctt
gagtacagcccagagcagggcaaggcggagggcggagagggcatctacagcacaggcggc
cagctggcacctggcagaggcggacttcattttgagggacccaggcatcctgggcttggg
gaaccaggacagggtccagatggctactacagccccagtttccacagcctccccgaggca
ccatatgcctccctgacggagatagagcacttggcacagaacgtctgtaagtcctatcga
gagacctgccagctacggctggaggacctgctgcggcagcgcaccagcctcttctccagg
gaggaggtgaccagctaccagaggaagtcgatgtgggagatgtgggagcgctgtgcccac
cgtctcaccgaggccattcagtacgtggtggagttcgccaagaggctctcaggctttatg
gagctctgccagaatgaccagatcgtcctgctgaaagcaggagcgatggaagtcgtgctg
gtcaggatgtgccgagcctacaatgctgagaaccacacggtcttttttgaaggcaaatac
ggtggcgtggagctgttccgagccttgggctgcagcgagctcatcagctccatctttgac
ttctcccactccctcagtgccttgcgcttttctgaggacgagatcgccctctacacagcg
ctggttctcatcaatgccaatcggccagggctccaagacaaaaggaaagtagaacagctg
cagtacaatctggagctggcctttcatcaccatctctgcaagactcatcgccaaggcatc
ctggcaaagctgccacccaaggggaagctccggagcctgtgcagccagcacgtggagaag
ctgcaggtcttccagcatctccaccccatcgtggtccaagctgctttccccccgctctac
aaggagctcttcagcactgaaaccgagtcccccgcagggctgtccaagtga
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