Spermophilus citellus (European ground squirrel): 308658466
Help
Entry
308658466 CDS
T11988
Symbol
ARID2
Name
(RefSeq) AT-rich interactive domain-containing protein 2 isoform 1
KO
K11765
AT-rich interactive domain-containing protein 2
Organism
scil Spermophilus citellus (European ground squirrel)
Pathway
scil03082
ATP-dependent chromatin remodeling
scil05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
scil00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
308658466 (ARID2)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
308658466 (ARID2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
scil03000
]
308658466 (ARID2)
03021 Transcription machinery [BR:
scil03021
]
308658466 (ARID2)
03036 Chromosome and associated proteins [BR:
scil03036
]
308658466 (ARID2)
Transcription factors [BR:
scil03000
]
Eukaryotic type
Helix-turn-helix
ARID
308658466 (ARID2)
Transcription machinery [BR:
scil03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
308658466 (ARID2)
Chromosome and associated proteins [BR:
scil03036
]
Eukaryotic type
Chromatin remodeling factors
PBAF complex
308658466 (ARID2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ARID
RFX_DNA_binding
TSTD2_N
Motif
Other DBs
NCBI-GeneID:
308658466
NCBI-ProteinID:
XP_081167305
LinkDB
All DBs
Position
10:65928651..66108246
Genome browser
AA seq
1836 aa
AA seq
DB search
MANSTGKAPPDERRKGLAFLDELRQFHHSRGSPFKKIPAVGGKELDLHGLYTRVTTLGGF
AKVSEKNQWGEIVEEFNFPRSCSNAAFALKQYYLRYLEKYEKVHHFGEDDDEVPPGNPKP
QLPIGAIPSSYNYQQHSVSDYLRQSYGLSMDFNSPNDYNKLVLSLLSGLPNEVDFAINVC
TLLSNESKHVMQLEKDPKIITLLLANAGVFDDTLGSFSTVFGEEWKEKTDRDFVKFWKDI
VDDNEVRDLISDRNKSQEGTSGEWIWESLFHPPRKLGINDIEGQRVLQIAVILRNLSFEE
GNVKLLAANRTCLRFLLLSAHSHFISLRQLGLDTLGNIAAELLLDPVDFKTTHLMFHTVT
KCLMSRDRFLKMRGMEILGNLCKAEDNGVLICEYVDQDSYREIICHLTLPDVLLVISTLE
VLYMLTEMGDVACTKIAKVEKSIDMLVCLVSMDIQMFGPDALAAVKLVEHPSSSHQVLSE
IRPQAIEQVQTQTHVASSPASRAVVAQHVAPPPGIVEIDSEKFACQWLNAHFEVNPDCSV
SRAEMYSEYLSTCSKLARGGILTSTGFYKCLRTVFPNHTVKRVEDSSNNGQAHIHVVGVK
RRAIPLPIQMYYQQQPVSTPVVRVDSVPDVSPTPSPAGIPHGSQTVGNHFQRTPVTNQSS
NLTATQMSFPVQGVHTVAQTVPRIPPNPSLHTHQQQNAPVTVIQNKTPISCEVVKATVIQ
NSVPQTAVPVSIAVGGGPTQSSVVQNHSTGPQPVTVVNSQTLLHHPSVIPQPSPLHTVVP
GQIPSGTPVTVIQQAVPQSHIFGRVQNIPACTSTVSQGQQLITTSPQPVQSSSQQTSAGS
QPQDTVIIAPPQYVTTSASNIVSATSVQNFQVATGQMVTIAGVPSPQPSRVGFQNIAPKP
LPSQQVSSTVVQQPIQQPQQPTQQSVVIVSQPTQQGQTYAPAIHQIVLANPAALPAGQTV
QLTGQPSITPSSSPSPVPTTNNQVPTAMPSSSTPQSQGPPPTVSQMLSVKRQQQQQHSPA
PPPQQVQVQVQQPQQVQMQVQPQQTNAGVGQPASGESSLIKQLLLPKRGPSTPGGKLILP
APQIPPPNNARAPSPQVVYQVANNQAAGFGVQGQTPAQQLLVGQQNVQLVQSAMPPTGGV
QTVPISNLQILPGPLISNSPATIFQGTSGNQVTITVVPNTSFATATVSQGNATQLIAPAG
ITMSGTQAGVGLQVQTLPATQASPAGQSSCTTATPPFKGDKIICQKEEEAKEATGLHVHE
RKIEVMENPSCRRGTTNTSNGDSKENEMQVGSLLNGRKYSDSSLPPSNSGKIQSEVNQCS
LISNGPSLELGENGASGKQNSEQMDIQDIKCDLKKTLVNGICDFDKGDGSHLSKNIPNHK
TSNHVGNGEISPVEPQGTLDATQQDTAKGDQLERISNGPVLTLGGSPSMSSIQEASNAAI
QQFSGTDLPNGPLASSLNSDVPQQRPSVVVSPHSTTSVIQGHQIIAVPHSGSRVSHSPVL
SSDVRSTNGTAECKTVKRPAEDNDRETVAGIPNKVGVRIVTISDPNNAGCSATMVAVPAG
ADPSTVAKVAIESAVQQKQQQPPTYIQNVVPQNTPMPPSPAVQVQGQPNSSQPSPFSASS
QHADPMRKPGQNFMCLWQSCKKWFQTPSQVFYHAATEHGGKDVYPGQCLWEGCEPFQRQR
FSFITHLQDKHCSKDALLAGLKQDEPGQAGNQKSSTKQPAVGGTSSTPRAQKAIVNHPSA
ALMALRRGSRNLVFRDFTDEKEGPITKHIRLTAALILKNIGKYSECGRRLLKRHENNLSV
LAISNMEASSTLAKCLYELNFTVQSKEQEKDSEMLQ
NT seq
5511 nt
NT seq
+upstream
nt +downstream
nt
atggcaaactcgacggggaaggcgcctccggacgagcggagaaagggactcgctttcctg
gacgagctgcggcagttccaccacagcagagggtcgccttttaaaaaaatccctgcggtg
ggtgggaaggagctggatcttcacggtctctacaccagagtcactactttaggcggattc
gcgaaggtttctgagaagaatcagtggggagaaattgttgaagagttcaactttcccaga
agttgttctaacgctgcctttgctttaaaacagtattacttgcgttatctagaaaagtac
gagaaagttcatcattttggggaggatgatgatgaggtaccaccaggcaatccaaagcca
cagcttcctattggtgcaattccatcttcctacaattaccagcaacacagtgtgtcagat
tatctgcggcaaagttatgggctatctatggactttaattcgccaaatgattataataaa
ttggtgctttcactgttatctggactcccaaatgaagtggactttgctattaatgtatgc
actctcctatccaatgaaagcaagcacgtcatgcaacttgaaaaagaccctaaaatcatc
actttattacttgctaatgctggggtgtttgatgacactttaggatccttttctactgta
tttggagaagaatggaaagagaagactgatagagactttgttaagttttggaaagacatt
gttgatgataatgaagtacgtgatctcatttctgatagaaacaagtctcaggaaggtaca
tcaggagaatggatttgggaatctttatttcatccacctcgaaagctgggcattaatgat
attgaaggacagcgggtacttcagattgcagtgattttgcgaaatctttcctttgaagag
ggcaatgttaagctcttggcagctaatcgtacctgtcttcgtttcctattactttctgca
catagtcattttatttctttaaggcaattaggccttgacacattaggaaatattgcagct
gagcttttattggaccctgttgatttcaaaactactcatctgatgtttcatactgttaca
aaatgcttaatgtcaagggatagatttttaaagatgaggggcatggaaattttgggaaat
ctttgcaaagctgaagataatggtgttttaatttgtgaatatgtggatcaagattcatat
agagagatcatttgtcatctcactttacctgatgtgctgcttgtaatctcaacacttgag
gtgctatacatgctcactgaaatgggagatgttgcttgcacaaaaattgcaaaagtagaa
aagagcattgacatgttagtttgtctggtttctatggatattcagatgtttggccctgat
gcactagcagcagtaaaactcgtcgaacatccaagttccagtcatcaagttttatctgaa
attaggccacaagctatagagcaagtccaaacccagacccatgtagcatcatccccagct
tccagagcagttgtagcacaacatgttgctccacctccaggaatagtggaaatagatagt
gagaagtttgcttgtcaatggctaaatgctcattttgaagtaaatccagattgttctgtc
tctcgagcagaaatgtattccgaatacctctcaacttgtagtaaattagctcgtggtgga
atcctcacatcaactggattttataagtgtcttagaacagtttttccaaaccatacagtg
aagagagtggaggattccagtaacaatgggcaggcacatatccatgtggtaggagtaaaa
cggagggctatcccacttcccattcagatgtactatcagcagcaaccagtttctactcct
gttgttcgtgttgattctgttcctgatgtatctccaactccttcacctgcaggaatccct
catggatcacaaactgtaggaaatcattttcagaggactcctgttaccaaccaatcttca
aatttgactgcaacacaaatgtcttttccagtacaaggtgttcatactgtggcacagact
gttccaagaattccaccaaatccttcacttcatacccaccagcagcaaaatgctccagtg
actgtcattcaaaataaaactccaatttcttgtgaagtggtcaaggctactgtaatccag
aattctgtaccccagacagcagttcctgttagtattgctgttggaggaggacctacacag
agttctgtggttcagaatcatagtacagggccacaacctgttacagttgtgaattctcag
acattgcttcaccacccatctgtcataccacaaccgtctccattacacacggtggtacca
ggacaaataccttcaggcactcctgttacggtaattcaacaagcagtcccacagagtcat
atatttggcagagtacagaacataccagcatgtacttctacagtttcacagggtcaacag
ttaatcaccacatcaccccaacctgtgcaatcttcatctcaacagacatcagctggtagc
cagccacaagacactgttatcatagcacccccacagtatgtaacaacttctgcatccaac
attgtctcagcaacttcagtacagaattttcaggtagctacaggacaaatggttaccatt
gctggtgtcccaagtccacaaccctcaagggtaggatttcagaacattgcaccaaaacct
ctcccttctcagcaagtttcatcaacagtggtacagcagcctattcaacaaccacaacag
ccaacccaacaaagtgtagtgattgtaagccagccaactcaacaaggtcaaacttatgca
ccagccattcaccaaattgttcttgctaatccagcagctcttccagctggtcagacagtt
cagctaactggacaaccaagcataactccatcttcttcaccatcacctgtcccaactacc
aataaccaagttcctactgccatgccatcttcttccacccctcaatcacagggaccacct
cctactgtcagtcaaatgctatctgtgaaaaggcagcaacagcagcagcattcaccagca
cccccaccacaacaggtacaggtacaagttcagcagccacaacaagtacagatgcaagtt
cagcctcagcaaacaaatgcaggagttggtcagcctgcttctggtgagtcaagtctgata
aaacagctgctacttccaaagcgtggtccttcaactccaggtggtaaacttatcctccca
gctccacagattcctccccctaataatgcaagagctcctagccctcaggtggtctatcag
gtggctaataaccaagcagctggttttggagtccaggggcaaactccagctcagcagctg
ttggttgggcagcaaaatgttcagttggtccaaagtgcaatgccacccacagggggagtg
caaactgtgcccatctcaaacttacaaatattgccaggaccactgatctcaaatagccca
gcaaccattttccaaggaacttctggcaaccaggtaaccataacagttgtgccaaataca
agttttgcaactgcaactgtgagtcagggaaatgcaactcagctcattgctccagcggga
attacgatgagcggaacacaggcaggagttggacttcaggtacaaacacttccagccact
caagcatctccagctggacaatcatcatgtactactgctactcccccattcaaaggtgat
aaaataatttgccaaaaggaggaggaagcaaaagaagcaacaggtttacatgttcatgaa
cgtaaaattgaagtcatggaaaacccatcctgccgacgaggaaccacaaacaccagcaat
ggggattcaaaagaaaatgaaatgcaggtgggaagtcttttaaatgggagaaagtacagt
gactcaagtctacctccttcaaactcagggaaaattcaaagtgaggtcaatcagtgctca
ctaatcagtaatggaccatcattagaattaggtgagaatggagcatctggaaaacagaac
tcagaacaaatggacatacaggatatcaaatgtgatttgaaaaaaaccctagtaaatgga
atctgtgattttgataaaggagatggttctcatttaagcaaaaacattccaaatcacaaa
acttccaatcatgtaggaaatggtgagatatctccagtggaaccacaaggaactttagat
gccactcagcaagatactgccaaaggtgatcagctagaaagaatttctaatggacctgta
ttaactttgggtggttcaccatctatgagcagtatacaggaggcttcaaatgcggcaata
cagcaatttagtggtactgatttgcctaatggacctctagcttcaagtttgaattcagat
gtgcctcagcaacgcccaagtgtagttgtctcaccacattctacaacctctgtcatacag
gggcatcaaatcatagcagttccccactcaggatcaagagtgtcccattctcctgtccta
tcatcagatgttcggtctacaaatggcacagcagaatgcaaaactgtaaagaggccagca
gaggataatgatagggaaacagtcgcaggaattccaaataaagtaggagttagaattgtt
acaatcagtgaccccaacaatgctggctgcagtgcaacaatggttgctgttccagcagga
gcagatccaagcactgtagctaaagtagcaatagaaagtgctgttcagcaaaagcagcag
cagccaccaacatatatacagaatgtggtcccacagaacactcctatgccaccttcacca
gctgtacaagtgcagggccagcctaacagttctcagccttctccattcagtgcatccagt
caacatgcagatccaatgagaaaacctgggcagaacttcatgtgtctgtggcagtcttgt
aaaaagtggtttcaaacaccctcacaggttttctaccacgcagctactgaacatggaggc
aaagatgtatatccagggcagtgtctttgggaaggttgtgagccttttcagcgacagaga
ttttcctttataacccacttacaggataagcactgttcaaaggatgccctacttgcagga
ttaaaacaagatgagccaggacaagcaggaaatcaaaaatcttctaccaagcaaccagct
gtagggggcacaagctcaactcctagagcacaaaaggccattgtgaaccatcccagtgct
gcactcatggctctcaggagaggatcaagaaaccttgtctttcgagattttacagatgaa
aaagagggaccaataactaaacacatccgactaacagctgccttaatattaaaaaatatt
ggtaaatactcagaatgtggtcgcaggttgttaaagagacatgaaaacaatttatcagtg
ctagccattagtaacatggaagcttcctccacccttgccaaatgcctttatgaacttaat
tttacagttcagagtaaagaacaagaaaaagactcagaaatgctgcagtga
DBGET
integrated database retrieval system
