Streptomyces cinereoruber: CP977_08905
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Entry
CP977_08905 CDS
T07115
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
scin
Streptomyces cinereoruber
Pathway
scin03030
DNA replication
scin03410
Base excision repair
scin03420
Nucleotide excision repair
scin03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
scin00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CP977_08905 (polA)
03410 Base excision repair
CP977_08905 (polA)
03420 Nucleotide excision repair
CP977_08905 (polA)
03440 Homologous recombination
CP977_08905 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
scin03032
]
CP977_08905 (polA)
03400 DNA repair and recombination proteins [BR:
scin03400
]
CP977_08905 (polA)
Enzymes [BR:
scin01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CP977_08905 (polA)
DNA replication proteins [BR:
scin03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
CP977_08905 (polA)
DNA repair and recombination proteins [BR:
scin03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
CP977_08905 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CP977_08905 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
DNA_pol_A_exo1
HHH_2
DNA_pol_lambd_f
HHH_5
NYN_YacP
baeRF_family2
Motif
Other DBs
NCBI-ProteinID:
QEV32269
LinkDB
All DBs
Position
complement(2021566..2024277)
Genome browser
AA seq
903 aa
AA seq
DB search
MAETASKNTPDTRPRLLLMDGHSLAYRAFFALPAENFTTATGQPTNAIYGFASMLANTLR
DETPTHFAVAFDVSRKTWRSEEFPEYKANRSKTPDEFKGQVELIGELLDAMRAQRFAVDG
FEADDVIATLATQAEAEGFDVLIVTGDRDSFQLVTDHVTVLYPTKGVSELTRFTPEKIQE
KYGLSPSQYPDFAALRGDPSDNLPGIPGVGEKTAAKWITQFGSFDQLVERAEEVKGKVGQ
NFRDHLESVKLNRRLTEMVRDVELSKTVADLAREPYDRTAVALVLDTLEIRNPSLRERLL
AVDPGSAEEAAPPPAAGVELDGSVLSAGELAPWLAEHGTEPLGVATVDSWALGTGNVSEV
ALAAAGGAAAWFDPSELDEADERAWAAWISDPDRPKVMHNAKGAMRVFPEHGWSVAGVTM
DTALAAYLVKPGRRSFALDALSIEYLGRELAPAAASDGQLAFGADDTAEAEALMAQARAV
LDLGGAFEERLGEVGARELLHEVELPTSALLARLERHGIAADREHLEAMEQQFAGAVQQA
VKEAHASVGHEFNLGSPKQLQEVFFGELNLPKTKKTKTGYTTDADALAWLAGQTEHELPV
IMLRHREQARLRSTVEGLVKTIAADGRIHTTFSQTVAATGRLSSTDPNLQNVPVRTDEGR
AIRHGFVVGEGFEALMTADYSQIELRVMAHLSEDEGLLEAFTSGEDLHTTVASQVFGVER
SAVDAEMRRKIKAMSYGLAYGLSAFGLAQQLTIDPAEARILMETYFERFGGVRDYLRRIV
DEARATGYTETMLGRRRYLPDLNSDNRQRREAAERMALNAPIQGTAADIVKVAMLNVDRA
LTEAGLASRMLLQVHDEIVLELAPGEREQVEALVREQMSGAAHLRAPLDVSVGVGRDWDS
AAH
NT seq
2712 nt
NT seq
+upstream
nt +downstream
nt
gtggccgagacagcatcgaagaacaccccagacacccgcccccgcctgctcctgatggac
gggcactcgctcgcgtaccgggcgttcttcgcgctgcccgcggagaacttcaccaccgcg
accgggcagccgacgaacgcgatctacgggttcgcctcgatgctggcgaacacgctgcgc
gacgagacgcccacgcacttcgcggtggcgttcgacgtgtcccgcaagacctggcggtcc
gaggagttcccggagtacaaggcgaaccgctcgaagacgcccgacgagttcaaggggcag
gtcgagctgatcggcgagctgctcgacgcgatgcgcgcgcagcgcttcgccgtggacggc
ttcgaggcggacgacgtcatcgcgaccctcgccacgcaggccgaggccgagggcttcgac
gtcctgatcgtcaccggcgaccgggactccttccagctcgtcaccgaccacgtcaccgtg
ctctaccccaccaagggcgtctccgagctgacccgtttcaccccggagaagatccaggag
aagtacggtctgagcccctcgcagtaccccgacttcgcggccctgcgcggcgacccgtcg
gacaacctgcccggcatccccggggtcggcgagaagaccgccgccaagtggatcacccag
ttcggctccttcgaccagctcgtcgagcgggccgaggaggtcaagggcaaggtcgggcag
aacttccgcgaccacctggagtcggtgaagctcaaccggcgcctgaccgagatggtccgg
gacgtcgagctgtcgaagacggtggccgacctggcccgcgagccgtacgaccggacggcc
gtcgccctcgtcctcgacaccctggagatccgcaacccctccctgcgcgagcggctcctc
gccgtcgacccgggctccgccgaggaggccgccccgccgcccgccgcgggcgtcgagctc
gacggctccgtcctctccgccggcgagctcgccccctggctcgccgagcacggcaccgag
cccctgggcgtcgccaccgtcgacagctgggcgctcggcaccggaaacgtcagcgaggtc
gccctcgccgccgccgggggagccgccgcctggttcgaccccagcgagctcgacgaggcc
gacgagcgggcctgggccgcgtggatctccgaccccgaccgccccaaggtcatgcacaac
gccaagggcgccatgcgggtcttccccgagcacggctggagcgtcgcgggcgtcaccatg
gacaccgccctcgccgcctacctggtcaagcccggccgccgctccttcgccctggacgcg
ctctcgatcgagtacctcggccgcgagctggcccccgcggccgcctccgacgggcagctc
gccttcggcgccgacgacaccgccgaggccgaggccctcatggcccaggcccgcgccgtc
ctcgacctcggcggggccttcgaggagcggctcggcgaggtcggggcccgcgagctcctc
cacgaggtcgagctgcccacctccgccctcctcgcccgcctggagcggcacggcatcgcc
gccgaccgcgagcacctggaggccatggagcagcagttcgccggcgccgtccagcaggcc
gtgaaggaggcgcacgcctccgtcggccacgagttcaacctcggctcgcccaagcagctc
caggaggtcttcttcggcgagctgaacctcccgaagaccaagaagaccaagaccgggtac
acgaccgacgccgacgcgctcgcctggctggccggccagaccgagcacgaactgcccgtg
atcatgctccgccaccgcgagcaggcccggctccgctccaccgtcgagggcctggtcaag
acgatcgccgccgacggccggatccacaccaccttcagccagaccgtcgccgccaccggc
cgcctctcctccaccgacccgaacctgcagaacgtgccggtgcgcaccgacgagggccgg
gccatccggcacggcttcgtcgtcggcgagggcttcgaggccctgatgaccgccgactac
agccagatcgagctgcgggtcatggcccacctctccgaggacgagggcctcctggaggcc
ttcacctccggcgaggacctgcacaccaccgtcgcctcccaggtcttcggcgtcgagcgg
tccgccgtcgacgccgagatgcgccgcaagatcaaggccatgtcgtacggcctggcctac
ggcctctccgccttcggcctcgcccagcagctcaccatcgacccggccgaggcccggatc
ctgatggagacctacttcgagcgcttcggcggcgtccgggactacctgcgccggatcgtc
gacgaggcccgcgccaccggctacaccgagacgatgctcggccgccgccgctacctgccc
gacctcaacagcgacaaccggcagcgccgcgaggccgccgagcggatggcgctcaacgcc
cccatccagggcacggccgccgacatcgtgaaggtcgccatgctgaacgtcgaccgggcg
ctcacggaggcgggcctcgcctcccggatgctcctccaggtccacgacgaaatcgtgctc
gaactcgcccccggcgagcgcgagcaggtcgaggccctggtccgcgagcagatgtccggc
gcggcccacctgcgggccccgctcgacgtctccgtcggcgtcggccgcgactgggactcc
gccgcgcactga
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