Streptomyces cinereoruber: CP977_11625
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Entry
CP977_11625 CDS
T07115
Name
(GenBank) ribonuclease E/G
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
scin
Streptomyces cinereoruber
Pathway
scin03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
scin00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CP977_11625
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scin03019
]
CP977_11625
03009 Ribosome biogenesis [BR:
scin03009
]
CP977_11625
Enzymes [BR:
scin01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
CP977_11625
Messenger RNA biogenesis [BR:
scin03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CP977_11625
Ribosome biogenesis [BR:
scin03009
]
Prokaryotic type
rRNA processing factors
CP977_11625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
HC2
DnaJ_CXXCXGXG
Motif
Other DBs
NCBI-ProteinID:
QEV32745
LinkDB
All DBs
Position
complement(2613517..2617473)
Genome browser
AA seq
1318 aa
AA seq
DB search
MPESNEDITAPGDKLPPRRRRRAASRPAGPPVTGEAAEITGTTEAPAADTPEPAAAPAPV
EAETEAPAPRTRRRATRKATAPAGAPAAEETAAPVAETAPETAEEAPEAAPARPARRRAT
RKATAPATSPAPADETPADETPAPEAAAEPVAEAAPVEAETEAAPPARTRRRATRKATAP
AGAPAAAEEAPAPVAETAPEAAPVEAEAEAPAPRTRRRATRKAAAPAGAPEPAAEPQATE
APAAETPAAGESLPEAAVAQIAADEAEVAAAETAATRGRGRRRVTSPQFTSEPAPAREPR
RAARPAVAVFQAPVFAEPMFQTPETAAAAAAAAPVEPEDDEVEEVEETVETVEAAAPEET
VERAESGSRRRRRRRGEPVAVEPVPATVADEPEVEAAADALEEAEEAEETDEYEDRPSRR
RRRGGRRRRRGELTEVEETEEGEEPHAEDESEESEDGEEETEEAEGLTGGSSSSRRRRRR
RRRSGDAAADAETGDEDGVRTVVKVREPRPAREKTEPGTGADEVQSIKGSTRLEAKKQRR
REGREQGRRRVPIITEAEFLARREAVERVMVVRQNGERTQIGVLEDNVLVEHYVNKEQAT
SYVGNVYLGKVQNVLPSMEAAFVDIGKGRNAVLYAGEVNFEALGMGHGPRRIESALKSGQ
SVLVQVTKDPIGHKGARLTSQVSLPGRYLVYVPEGSMTGISRKLPDTERARLKTILKKIV
PEDAGVIVRTAAEGASEDELRRDVERLQAQWEDIQKKAKSGNAPTLLYGEPDMTVRVVRD
IFNEDFSKVIVSGDDAWETIHGYVGHVAPDLTDRLSKWTSEVDVFATYRIDEQLMKALDR
KVWLPSGGSLVIDKTEAMIVVDVNTGKFTGQGGNLEETVTRNNLEAAEEIVRQLRLRDLG
GIVVIDFIDMVLESNRDLVLRRLLECLGRDRTKHQVAEVTSLGLVQMTRKRVGQGLLESF
SETCVHCNGRGVIVHMEQPTTPGGGGGGKRAKKRGRGGDGHVHEHEHAEAVETGAEDAAH
EVETEAEVAAELAAPVAVPVPIAPDEELYGSVAEAEAAATRGRGRRRATRRVTAPVASTP
VAPTPVAPAPVVETVTEAEPVVAEPVAEPAAGPEAVEPEAAPVAETVAEAVVEEPAAPAP
RGRRRATRRATSPVVSTTEPAEPVTVVETVTEAEADVTPVAEPEPEPEAVAAEEPAPEQP
AVEEAPVAAPPRARRRVVRKATAPAGSPAGAEEAVVVVATAPAAEEPEAADTEVADAEAE
PAPAKKTAARKTTAKKATAKKTAAKKTAATKKTAAKKTTAKKTTAKKAAEKTASPAQD
NT seq
3957 nt
NT seq
+upstream
nt +downstream
nt
atgcccgagtccaacgaagacatcactgcccccggtgacaagctgccgccgcgccgcagg
cgccgcgccgcctcccgccccgccggcccgccggtgacgggcgaggccgccgagatcacc
ggcaccaccgaggccccggccgccgacacgccggagcccgccgcggcccccgctccggtc
gaggccgagaccgaagcccccgcgccgcgcacccgccgccgcgccacccgcaaggccacg
gccccggccggtgcgcccgccgccgaggagaccgccgcgccggtcgcggagaccgcgccc
gagaccgccgaggaggcccccgaggccgctccggcgcgcccggcccgtcgccgcgccacc
cgaaaggccaccgctccggcgacctccccggccccggccgacgagacccccgccgacgag
accccggcgcccgaggccgccgccgagccggtcgcggaggccgctccggtcgaggccgag
accgaggccgccccgccggcccgtacccgccgccgtgccactcgtaaggccaccgctccg
gccggtgcgcccgccgccgccgaggaggcccccgcgccggtcgccgagaccgcccccgag
gccgccccggtcgaggccgaggccgaagcccccgcgccgcgcacccgccgccgcgccacc
cgcaaggccgccgccccggccggtgcccccgagcccgccgccgagccgcaggccaccgag
gctccggccgccgagacgcccgccgccggcgagtcgctgcccgaggccgccgtcgcgcag
atcgccgccgacgaggccgaggtcgccgccgccgagaccgccgccacgcgtggccgtggc
cgccgccgcgtcacctcgccgcagttcacctccgagccggccccggcccgcgagccgcgc
cgcgccgcgcgcccggccgtcgccgtcttccaggccccggtcttcgccgagccgatgttc
cagacgccggagacggccgccgcggccgccgccgccgcgcccgtggagccggaggacgac
gaggtcgaggaggtcgaggagaccgtcgagacggtcgaggccgccgcgcccgaggagacc
gtcgagcgggccgagtccggttcccgccgccgtcgccgccgccgcggcgagcccgtcgcc
gtcgagcccgttccggccaccgtcgccgacgagcccgaggtcgaggccgccgccgacgcg
ctggaagaggccgaggaggccgaggagacggacgagtacgaggaccgtccctcccgtcgc
cgtcgccgcggcggccgccgccgccgccgcggggagctcaccgaggtcgaggagaccgag
gagggcgaggagccgcacgccgaggacgagtccgaggagtccgaggacggcgaggaggag
accgaggaggccgagggcctcaccggcggctccagcagctcccgccgccgtcgccgtcgc
cgccgtcgcagcggggacgccgccgccgacgccgagacgggcgacgaggacggcgtccgt
acggtcgtcaaggtccgcgagccccgcccggcccgcgagaagaccgagcccggcaccggc
gccgacgaggtccagtccatcaagggctcgacccgcctggaggccaagaagcagcgccgc
cgggaaggccgcgagcagggccgccgccgcgtcccgatcatcaccgaggccgagttcctc
gcccgccgcgaggccgtcgagcgcgtcatggtcgtccgccagaacggcgagcgcacccag
atcggcgtcctggaagacaacgtgctcgtcgagcactacgtcaacaaggagcaggccacc
tcgtacgtcggcaacgtctacctgggcaaggtccagaacgtcctgccgtccatggaggcc
gccttcgtcgacatcggcaagggccgcaacgccgtcctgtacgccggcgaggtcaacttc
gaggcgctcggcatgggccacggcccccgccgcatcgagtccgccctcaagtccggccag
tcggtcctcgtccaggtcaccaaggacccgatcggccacaagggcgcccgcctgaccagc
caggtctccctgcccggccgctacctcgtgtacgtgcccgagggttcgatgaccggcatc
agccgcaagctccccgacaccgagcgcgcgcgcctgaagaccatcctcaagaagatcgtc
cccgaggacgcgggcgtcatcgtgcgcaccgccgccgagggcgcgagcgaggacgagctg
cgccgcgacgtcgagcgcctgcaggcgcagtgggaggacatccagaagaaggcgaagagc
ggcaacgccccgacgctgctctacggcgagccggacatgaccgtccgggtcgtccgcgac
atcttcaacgaggacttctccaaggtcatcgtcagcggcgacgacgcgtgggagaccatc
cacgggtacgtcggccacgtcgccccggacctgaccgaccgcctgtccaagtggacgagc
gaggtcgacgtcttcgcgacgtaccggatcgacgagcagctgatgaaggcgctcgaccgc
aaggtctggctgccgtccggcggctcgctggtgatcgacaagaccgaggcgatgatcgtc
gtcgacgtcaacaccggcaagttcaccggccagggcggcaacctggaggagaccgtcacc
aggaacaacctggaggcggccgaggagatcgtgcgccagctgcggctgcgcgacctcggc
ggcatcgtcgtcatcgacttcatcgacatggtcctggagtccaaccgcgacctggtgctg
cgccgcctcctggagtgcctgggccgggaccggaccaagcaccaggtggccgaggtcacc
tcgctgggcctggtccagatgacccgcaagcgggtcggccagggcctcctggagtccttc
tccgagacctgcgtccactgcaacgggcgcggcgtcatcgtccacatggagcagccgacc
acccccggcggcggtggcggcggcaagcgcgcgaagaagcgcggccgtggcggcgacggg
cacgtccacgagcacgagcacgccgaggccgtggagaccggtgccgaggacgcggcccac
gaggtcgagaccgaggccgaggtcgcggcggagctggccgccccggtggccgtgccggtg
ccgatcgccccggacgaggagctgtacggctccgtcgccgaggcggaggcggccgccacg
cgcggccgtggccgccgtcgcgcgacccgcagggtgaccgccccggtcgcctcgacgccg
gtcgctccgacgccggtcgccccggctcccgtcgtggagaccgtgaccgaggccgagccc
gtcgtggcggagccggtggccgagccggccgccgggcccgaggccgtcgagcccgaggcc
gcccccgtggcggagaccgtggccgaggccgtggtcgaggagcccgccgccccggccccg
cgcggccgtcgccgtgccacccgccgggcgacctccccggtcgtctcgaccacggagccg
gccgagccggtcaccgtcgtggagacggtgaccgaggccgaggccgacgtgactcccgtc
gcggagccggagccggagcccgaggccgtcgcggccgaggagcccgccccggagcagccc
gccgtcgaggaggcccccgtggccgccccgccgcgtgcccgccgccgggtggtccgcaag
gccaccgcccccgccggttcgcccgcgggcgccgaggaagccgtcgtcgtggtcgccacg
gccccggccgccgaggagcccgaggccgcggacaccgaggtcgcggacgccgaggccgag
cccgcccccgccaagaagacggcggcgcgcaagaccacggcgaagaaggccacggccaag
aagaccgccgccaagaagacggcggcgaccaagaagaccgcggcgaagaagacgaccgcc
aagaagaccacggccaagaaggcggccgagaagaccgcctccccggcccaggactga
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